RNA–Protein interactions for RNA: ENST00000490484.7

RBM39-236, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 871 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-236ENST00000490484 PPM1AP35813 382 aa11.54□□□□□ -0.56
RBM39-236ENST00000490484 RARRES1P49788 294 aa11.54□□□□□ -0.56
RBM39-236ENST00000490484 RAB27AP51159 221 aa11.54□□□□□ -0.56
RBM39-236ENST00000490484 RABEP1Q15276 862 aa11.54□□□□□ -0.56
RBM39-236ENST00000490484 ZNF174Q15697 407 aa11.54□□□□□ -0.56
RBM39-236ENST00000490484 TTC38Q5R3I4 469 aa11.54□□□□□ -0.56
RBM39-236ENST00000490484 PLPP4Q5VZY2 271 aa11.54□□□□□ -0.56
RBM39-236ENST00000490484 KCNT2Q6UVM3 1135 aa11.54□□□□□ -0.56
RBM39-236ENST00000490484 NOSTRINQ8IVI9 506 aa11.54□□□□□ -0.56
RBM39-236ENST00000490484 FBXO18Q8NFZ0 1043 aa11.54□□□□□ -0.56
RBM39-236ENST00000490484 PIGOQ8TEQ8 1089 aa11.54□□□□□ -0.56
RBM39-236ENST00000490484 TCF25Q9BQ70 676 aa11.54□□□□□ -0.56
RBM39-236ENST00000490484 CD320Q9NPF0 282 aa11.54□□□□□ -0.56
RBM39-236ENST00000490484 ENTPD7Q9NQZ7 604 aa11.54□□□□□ -0.56
RBM39-236ENST00000490484 INPP5FQ9Y2H2 1132 aa11.54□□□□□ -0.56
RBM39-236ENST00000490484 A0A087WWV3 80 aa11.53□□□□□ -0.56
RBM39-236ENST00000490484 PER2O15055 1255 aa11.53□□□□□ -0.56
RBM39-236ENST00000490484 ST18O60284 1047 aa11.53□□□□□ -0.56
RBM39-236ENST00000490484 USO1O60763 962 aaKnown RBP11.53□□□□□ -0.56
RBM39-236ENST00000490484 ZC3H11AO75152 810 aaKnown RBP eCLIP11.53□□□□□ -0.56
RBM39-236ENST00000490484 DGAT1O75907 488 aa11.53□□□□□ -0.56
RBM39-236ENST00000490484 SKIP12755 728 aa11.53□□□□□ -0.56
RBM39-236ENST00000490484 TECP42680 631 aa11.53□□□□□ -0.56
RBM39-236ENST00000490484 ERVFC1P60507 584 aa11.53□□□□□ -0.56
RBM39-236ENST00000490484 RBM10P98175 930 aaKnown RBP11.53□□□□□ -0.56
RBM39-236ENST00000490484 NBR1Q14596 966 aa11.53□□□□□ -0.56
RBM39-236ENST00000490484 POTEGQ6S5H5 508 aa11.53□□□□□ -0.56
RBM39-236ENST00000490484 GLB1LQ6UWU2 654 aa11.53□□□□□ -0.56
RBM39-236ENST00000490484 SRGAP1Q7Z6B7 1085 aa11.53□□□□□ -0.56
RBM39-236ENST00000490484 FAM178BQ8IXR5 827 aa11.53□□□□□ -0.56
RBM39-236ENST00000490484 EFHBQ8N7U6 833 aa11.53□□□□□ -0.56
RBM39-236ENST00000490484 ASAP3Q8TDY4 903 aa11.53□□□□□ -0.56
RBM39-236ENST00000490484 MRPS27Q92552 414 aaKnown RBP11.53□□□□□ -0.56
RBM39-236ENST00000490484 TRAIPQ9BWF2 469 aa11.53□□□□□ -0.56
RBM39-236ENST00000490484 TLE6Q9H808 572 aa11.53□□□□□ -0.56
RBM39-236ENST00000490484 UPF2Q9HAU5 1272 aaKnown RBP11.53□□□□□ -0.56
RBM39-236ENST00000490484 ANKEF1Q9NU02 776 aa11.53□□□□□ -0.56
RBM39-236ENST00000490484 BARX2Q9UMQ3 279 aaPredicted RBP11.53□□□□□ -0.56
RBM39-236ENST00000490484 FAM50BQ9Y247 325 aa11.53□□□□□ -0.56
RBM39-236ENST00000490484 PCDHB2Q9Y5E7 798 aa11.53□□□□□ -0.56
RBM39-236ENST00000490484 INO80B-WBP1J3KQ70 363 aa11.52□□□□□ -0.57
RBM39-236ENST00000490484 FSCN2O14926 492 aa11.52□□□□□ -0.57
RBM39-236ENST00000490484 MBTPS2O43462 519 aa11.52□□□□□ -0.57
RBM39-236ENST00000490484 TSPAN1O60635 241 aa11.52□□□□□ -0.57
RBM39-236ENST00000490484 MED24O75448 989 aa11.52□□□□□ -0.57
RBM39-236ENST00000490484 GLP2RO95838 553 aa11.52□□□□□ -0.57
RBM39-236ENST00000490484 SPATA31C1P0DKV0 1188 aa11.52□□□□□ -0.57
RBM39-236ENST00000490484 PLCB3Q01970 1234 aa11.52□□□□□ -0.57
RBM39-236ENST00000490484 ZP2Q05996 745 aa11.52□□□□□ -0.57
RBM39-236ENST00000490484 ORC2Q13416 577 aaPredicted RBP11.52□□□□□ -0.57
RBM39-236ENST00000490484 ADAM15Q13444 863 aa11.52□□□□□ -0.57
RBM39-236ENST00000490484 SMAD4Q13485 552 aaKnown RBP11.52□□□□□ -0.57
RBM39-236ENST00000490484 CAPSQ13938 189 aa11.52□□□□□ -0.57
RBM39-236ENST00000490484 TFDP1Q14186 410 aa11.52□□□□□ -0.57
RBM39-236ENST00000490484 MXD4Q14582 209 aaPredicted RBP11.52□□□□□ -0.57
RBM39-236ENST00000490484 MAEAQ7L5Y9 396 aa11.52□□□□□ -0.57
RBM39-236ENST00000490484 CATSPER3Q86XQ3 398 aa11.52□□□□□ -0.57
RBM39-236ENST00000490484 GJD3Q8N144 294 aa11.52□□□□□ -0.57
RBM39-236ENST00000490484 SLC39A11Q8N1S5 342 aa11.52□□□□□ -0.57
RBM39-236ENST00000490484 KHSRPQ92945 711 aaKnown RBP eCLIP11.52□□□□□ -0.572e-9■■□□□ 13.9
RBM39-236ENST00000490484 POLR3FQ9H1D9 316 aaPredicted RBP11.52□□□□□ -0.57
RBM39-236ENST00000490484 EPHX3Q9H6B9 360 aa11.52□□□□□ -0.57
RBM39-236ENST00000490484 TUFT1Q9NNX1 390 aa11.52□□□□□ -0.57
RBM39-236ENST00000490484 TBC1D13Q9NVG8 400 aa11.52□□□□□ -0.57
RBM39-236ENST00000490484 SPG21Q9NZD8 308 aa11.52□□□□□ -0.57
RBM39-236ENST00000490484 CLEC1BQ9P126 229 aa11.52□□□□□ -0.57
RBM39-236ENST00000490484 PUF60Q9UHX1 559 aaKnown RBP11.52□□□□□ -0.57
RBM39-236ENST00000490484 CD207Q9UJ71 328 aa11.52□□□□□ -0.57
RBM39-236ENST00000490484 NOL7Q9UMY1 257 aaKnown RBP11.52□□□□□ -0.57
RBM39-236ENST00000490484 LZTS1Q9Y250 596 aa11.52□□□□□ -0.57
RBM39-236ENST00000490484 HIDE1A8MVS5 230 aa11.51□□□□□ -0.57
RBM39-236ENST00000490484 NT5C1B-RDH14C9J2C7 533 aa11.51□□□□□ -0.57
RBM39-236ENST00000490484 ASAP2O43150 1006 aa11.51□□□□□ -0.57
RBM39-236ENST00000490484 ZNF623O75123 536 aa11.51□□□□□ -0.57
RBM39-236ENST00000490484 CD2BP2O95400 341 aaKnown RBP11.51□□□□□ -0.57
RBM39-236ENST00000490484 GLRA2P23416 452 aa11.51□□□□□ -0.57
RBM39-236ENST00000490484 HOXA11P31270 313 aaPredicted RBP11.51□□□□□ -0.57
RBM39-236ENST00000490484 CA8P35219 290 aa11.51□□□□□ -0.57
RBM39-236ENST00000490484 ARL2P36404 184 aa11.51□□□□□ -0.57
RBM39-236ENST00000490484 TRAPPC10P48553 1259 aa11.51□□□□□ -0.57
RBM39-236ENST00000490484 ALDH7A1P49419 539 aaKnown RBP11.51□□□□□ -0.57
RBM39-236ENST00000490484 BCAR1P56945 870 aa11.51□□□□□ -0.57
RBM39-236ENST00000490484 PTENP60484 403 aa11.51□□□□□ -0.57
RBM39-236ENST00000490484 KRT17Q04695 432 aa11.51□□□□□ -0.57
RBM39-236ENST00000490484 RNASELQ05823 741 aaKnown RBP11.51□□□□□ -0.57
RBM39-236ENST00000490484 MBTD1Q05BQ5 628 aa11.51□□□□□ -0.57
RBM39-236ENST00000490484 SMAD2Q15796 467 aaKnown RBP11.51□□□□□ -0.57
RBM39-236ENST00000490484 DUSP6Q16828 381 aa11.51□□□□□ -0.57
RBM39-236ENST00000490484 NOMO2Q5JPE7 1267 aa11.51□□□□□ -0.57
RBM39-236ENST00000490484 UBXN11Q5T124 520 aa11.51□□□□□ -0.57
RBM39-236ENST00000490484 PDE12Q6L8Q7 609 aaKnown RBP11.51□□□□□ -0.57
RBM39-236ENST00000490484 TMEM173Q86WV6 379 aaPredicted RBP11.51□□□□□ -0.57
RBM39-236ENST00000490484 VN1R2Q8NFZ6 395 aa11.51□□□□□ -0.57
RBM39-236ENST00000490484 ERMNQ8TAM6 284 aa11.51□□□□□ -0.57
RBM39-236ENST00000490484 RSPH1Q8WYR4 309 aa11.51□□□□□ -0.57
RBM39-236ENST00000490484 PGBD4Q96DM1 585 aa11.51□□□□□ -0.57
RBM39-236ENST00000490484 CPB2Q96IY4 423 aa11.51□□□□□ -0.57
RBM39-236ENST00000490484 MSLNLQ96KJ4 702 aa11.51□□□□□ -0.57
RBM39-236ENST00000490484 GBP3Q9H0R5 595 aa11.51□□□□□ -0.57
RBM39-236ENST00000490484 GPRC5CQ9NQ84 441 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms