RNA–Protein interactions for RNA: ENST00000490348.1

SRGAP3-208, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 2

Gene SRGAP3, Length 1,554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-208ENST00000490348 NAMPTP43490 491 aa15.91■□□□□ 0.14
SRGAP3-208ENST00000490348 NPTX2P47972 431 aa15.91■□□□□ 0.14
SRGAP3-208ENST00000490348 PEX3P56589 373 aa15.91■□□□□ 0.14
SRGAP3-208ENST00000490348 SMAD3P84022 425 aaKnown RBP15.91■□□□□ 0.14
SRGAP3-208ENST00000490348 GIT2Q14161 759 aa15.91■□□□□ 0.14
SRGAP3-208ENST00000490348 TOP1MTQ969P6 601 aa15.91■□□□□ 0.14
SRGAP3-208ENST00000490348 DHX58Q96C10 678 aa15.91■□□□□ 0.14
SRGAP3-208ENST00000490348 DRC1Q96MC2 740 aa15.91■□□□□ 0.14
SRGAP3-208ENST00000490348 TIPINQ9BVW5 301 aa15.91■□□□□ 0.14
SRGAP3-208ENST00000490348 INO80BQ9C086 356 aaPredicted RBP15.91■□□□□ 0.14
SRGAP3-208ENST00000490348 CCDC113Q9H0I3 377 aa15.91■□□□□ 0.14
SRGAP3-208ENST00000490348 AGPAT5Q9NUQ2 364 aa15.91■□□□□ 0.14
SRGAP3-208ENST00000490348 HPSEQ9Y251 543 aa15.91■□□□□ 0.14
SRGAP3-208ENST00000490348 YBX2Q9Y2T7 364 aaKnown RBP15.91■□□□□ 0.14
SRGAP3-208ENST00000490348 A0A1B0GVL5 298 aa15.9■□□□□ 0.14
SRGAP3-208ENST00000490348 TTLL13PA6NNM8 815 aa15.9■□□□□ 0.14
SRGAP3-208ENST00000490348 C9IYK1 514 aa15.9■□□□□ 0.14
SRGAP3-208ENST00000490348 INO80B-WBP1J3KQ70 363 aa15.9■□□□□ 0.14
SRGAP3-208ENST00000490348 B4GALT5O43286 388 aa15.9■□□□□ 0.14
SRGAP3-208ENST00000490348 TSPAN1O60635 241 aa15.9■□□□□ 0.14
SRGAP3-208ENST00000490348 AMHP03971 560 aa15.9■□□□□ 0.14
SRGAP3-208ENST00000490348 PFKFB1P16118 471 aa15.9■□□□□ 0.14
SRGAP3-208ENST00000490348 ZNF131P52739 623 aa15.9■□□□□ 0.14
SRGAP3-208ENST00000490348 ODR4Q5SWX8 454 aa15.9■□□□□ 0.14
SRGAP3-208ENST00000490348 FAM117BQ6P1L5 589 aa15.9■□□□□ 0.14
SRGAP3-208ENST00000490348 CATSPER4Q7RTX7 472 aa15.9■□□□□ 0.14
SRGAP3-208ENST00000490348 GOLPH3LQ9H4A5 285 aa15.9■□□□□ 0.14
SRGAP3-208ENST00000490348 KCNH3Q9ULD8 1083 aa15.9■□□□□ 0.14
SRGAP3-208ENST00000490348 COL4A6Q14031 1691 aa15.9■□□□□ 0.14
SRGAP3-208ENST00000490348 GBF1Q92538 1859 aa15.9■□□□□ 0.14
SRGAP3-208ENST00000490348 SPTBN5Q9NRC6 3674 aaKnown RBP15.89■□□□□ 0.13
SRGAP3-208ENST00000490348 FAM237AA0A1B0GTK4 181 aa15.89■□□□□ 0.13
SRGAP3-208ENST00000490348 DENND3A2RUS2 1198 aa15.89■□□□□ 0.13
SRGAP3-208ENST00000490348 ARHGEF15O94989 841 aa15.89■□□□□ 0.13
SRGAP3-208ENST00000490348 PLS3P13797 630 aa15.89■□□□□ 0.13
SRGAP3-208ENST00000490348 FAM189BP81408 668 aa15.89■□□□□ 0.13
SRGAP3-208ENST00000490348 SV2BQ7L1I2 683 aa15.89■□□□□ 0.13
SRGAP3-208ENST00000490348 TAS1R3Q7RTX0 852 aa15.89■□□□□ 0.13
SRGAP3-208ENST00000490348 DDX12PQ92771 950 aa15.89■□□□□ 0.13
SRGAP3-208ENST00000490348 STAMQ92783 540 aa15.89■□□□□ 0.13
SRGAP3-208ENST00000490348 DNAJC19Q96DA6 116 aa15.89■□□□□ 0.13
SRGAP3-208ENST00000490348 IFT74Q96LB3 600 aa15.89■□□□□ 0.13
SRGAP3-208ENST00000490348 FZD8Q9H461 694 aa15.89■□□□□ 0.13
SRGAP3-208ENST00000490348 KBTBD4Q9NVX7 518 aa15.89■□□□□ 0.13
SRGAP3-208ENST00000490348 FAM13BQ9NYF5 915 aa15.89■□□□□ 0.13
SRGAP3-208ENST00000490348 ARHGAP28Q9P2N2 729 aa15.89■□□□□ 0.13
SRGAP3-208ENST00000490348 ODF2LQ9ULJ1 636 aa15.89■□□□□ 0.13
SRGAP3-208ENST00000490348 PIN4Q9Y237 131 aaKnown RBP15.89■□□□□ 0.13
SRGAP3-208ENST00000490348 USP20Q9Y2K6 914 aa15.89■□□□□ 0.13
SRGAP3-208ENST00000490348 A0A1W2PQ27 194 aa15.88■□□□□ 0.13
SRGAP3-208ENST00000490348 A0A1W2PQ64 194 aa15.88■□□□□ 0.13
SRGAP3-208ENST00000490348 A0A1W2PQD8 194 aa15.88■□□□□ 0.13
SRGAP3-208ENST00000490348 LCHNA4D1U4 455 aa15.88■□□□□ 0.13
SRGAP3-208ENST00000490348 UPP2O95045 317 aa15.88■□□□□ 0.13
SRGAP3-208ENST00000490348 DNAJB2P25686 324 aa15.88■□□□□ 0.13
SRGAP3-208ENST00000490348 SARSP49591 514 aaKnown RBP15.88■□□□□ 0.13
SRGAP3-208ENST00000490348 NDUFA8P51970 172 aa15.88■□□□□ 0.13
SRGAP3-208ENST00000490348 DMP1Q13316 513 aaPredicted RBP15.88■□□□□ 0.13
SRGAP3-208ENST00000490348 PPP2R5AQ15172 486 aa15.88■□□□□ 0.13
SRGAP3-208ENST00000490348 TPRNQ4KMQ1 711 aa15.88■□□□□ 0.13
SRGAP3-208ENST00000490348 SLC24A5Q71RS6 500 aa15.88■□□□□ 0.13
SRGAP3-208ENST00000490348 DYMQ7RTS9 669 aa15.88■□□□□ 0.13
SRGAP3-208ENST00000490348 IQUBQ8NA54 791 aa15.88■□□□□ 0.13
SRGAP3-208ENST00000490348 DEPTORQ8TB45 409 aa15.88■□□□□ 0.13
SRGAP3-208ENST00000490348 CPB2Q96IY4 423 aa15.88■□□□□ 0.13
SRGAP3-208ENST00000490348 FIZ1Q96SL8 496 aa15.88■□□□□ 0.13
SRGAP3-208ENST00000490348 NTPCRQ9BSD7 190 aaKnown RBP15.88■□□□□ 0.13
SRGAP3-208ENST00000490348 C17orf75Q9HAS0 396 aa15.88■□□□□ 0.13
SRGAP3-208ENST00000490348 RC3H2Q9HBD1 1191 aaKnown RBP15.88■□□□□ 0.13
SRGAP3-208ENST00000490348 CHST12Q9NRB3 414 aa15.88■□□□□ 0.13
SRGAP3-208ENST00000490348 CCDC169A6NNP5 214 aa15.87■□□□□ 0.13
SRGAP3-208ENST00000490348 SLC16A4O15374 487 aa15.87■□□□□ 0.13
SRGAP3-208ENST00000490348 ACTN4O43707 911 aaKnown RBP15.87■□□□□ 0.13
SRGAP3-208ENST00000490348 ATF7P17544 494 aaPredicted RBP15.87■□□□□ 0.13
SRGAP3-208ENST00000490348 ARF4P18085 180 aaPredicted RBP15.87■□□□□ 0.13
SRGAP3-208ENST00000490348 HTRA4P83105 476 aaPredicted RBP15.87■□□□□ 0.13
SRGAP3-208ENST00000490348 FAM187BQ17R55 369 aa15.87■□□□□ 0.13
SRGAP3-208ENST00000490348 UBXN11Q5T124 520 aa15.87■□□□□ 0.13
SRGAP3-208ENST00000490348 PPP4R3CPQ6ZMV5 832 aa15.87■□□□□ 0.13
SRGAP3-208ENST00000490348 FAM43BQ6ZT52 329 aaPredicted RBP15.87■□□□□ 0.13
SRGAP3-208ENST00000490348 TMEM161BQ8NDZ6 487 aa15.87■□□□□ 0.13
SRGAP3-208ENST00000490348 SPIRE2Q8WWL2 714 aa15.87■□□□□ 0.13
SRGAP3-208ENST00000490348 TRAIPQ9BWF2 469 aa15.87■□□□□ 0.13
SRGAP3-208ENST00000490348 C2orf40Q9H1Z8 148 aa15.87■□□□□ 0.13
SRGAP3-208ENST00000490348 PCDHA11Q9Y5I1 949 aa15.87■□□□□ 0.13
SRGAP3-208ENST00000490348 A0A0U1RQF3 1178 aa15.87■□□□□ 0.13
SRGAP3-208ENST00000490348 TLL1O43897 1013 aa15.87■□□□□ 0.13
SRGAP3-208ENST00000490348 ERLIN2O94905 339 aa15.87■□□□□ 0.13
SRGAP3-208ENST00000490348 ZSCAN20P17040 1043 aaPredicted RBP15.87■□□□□ 0.13
SRGAP3-208ENST00000490348 PCBP1Q15365 356 aaKnown RBP eCLIP15.87■□□□□ 0.13
SRGAP3-208ENST00000490348 LONRF3Q496Y0 759 aa15.87■□□□□ 0.13
SRGAP3-208ENST00000490348 SPRED2Q7Z698 418 aa15.87■□□□□ 0.13
SRGAP3-208ENST00000490348 ZBTB8OSQ8IWT0 167 aa15.87■□□□□ 0.13
SRGAP3-208ENST00000490348 FSIP1Q8NA03 581 aa15.87■□□□□ 0.13
SRGAP3-208ENST00000490348 RAD9AQ99638 391 aa15.87■□□□□ 0.13
SRGAP3-208ENST00000490348 TNMDQ9H2S6 317 aa15.87■□□□□ 0.13
SRGAP3-208ENST00000490348 CUEDC2Q9H467 287 aa15.87■□□□□ 0.13
SRGAP3-208ENST00000490348 PARVGQ9HBI0 331 aa15.87■□□□□ 0.13
SRGAP3-208ENST00000490348 KMT5AQ9NQR1 393 aa15.87■□□□□ 0.13
SRGAP3-208ENST00000490348 C1orf112Q9NSG2 853 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms