RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 C12orf65Q9H3J6 166 aaKnown RBP4.1□□□□□ -1.75
DEPDC1-204ENST00000489862 NCOA5Q9HCD5 579 aaKnown RBP4.1□□□□□ -1.75
DEPDC1-204ENST00000489862 TRIM39Q9HCM9 518 aa4.1□□□□□ -1.75
DEPDC1-204ENST00000489862 GEMIN8Q9NWZ8 242 aaKnown RBP4.1□□□□□ -1.75
DEPDC1-204ENST00000489862 ZIM2Q9NZV7 527 aa4.1□□□□□ -1.75
DEPDC1-204ENST00000489862 B3GALT1Q9Y5Z6 326 aa4.1□□□□□ -1.75
DEPDC1-204ENST00000489862 COMMD10Q9Y6G5 202 aa4.1□□□□□ -1.75
DEPDC1-204ENST00000489862 CCDC163A0A0D9SF12 145 aa4.09□□□□□ -1.76
DEPDC1-204ENST00000489862 A0A0G2JNJ9 132 aa4.09□□□□□ -1.76
DEPDC1-204ENST00000489862 IKBKBO14920 756 aa4.09□□□□□ -1.76
DEPDC1-204ENST00000489862 AKAP10O43572 662 aa4.09□□□□□ -1.76
DEPDC1-204ENST00000489862 PDE8AO60658 829 aa4.09□□□□□ -1.76
DEPDC1-204ENST00000489862 RAPGEF3O95398 923 aa4.09□□□□□ -1.76
DEPDC1-204ENST00000489862 APPP05067 770 aa4.09□□□□□ -1.76
DEPDC1-204ENST00000489862 ZBTB48P10074 688 aaPredicted RBP4.09□□□□□ -1.76
DEPDC1-204ENST00000489862 BDNFP23560 247 aa4.09□□□□□ -1.76
DEPDC1-204ENST00000489862 STAT5BP51692 787 aa4.09□□□□□ -1.76
DEPDC1-204ENST00000489862 PCOLCEQ15113 449 aa4.09□□□□□ -1.76
DEPDC1-204ENST00000489862 GPR162Q16538 588 aa4.09□□□□□ -1.76
DEPDC1-204ENST00000489862 TMEM177Q53S58 311 aa4.09□□□□□ -1.76
DEPDC1-204ENST00000489862 AGBL4Q5VU57 503 aa4.09□□□□□ -1.76
DEPDC1-204ENST00000489862 TRIM68Q6AZZ1 485 aa4.09□□□□□ -1.76
DEPDC1-204ENST00000489862 CCSAPQ6IQ19 270 aaPredicted RBP4.09□□□□□ -1.76
DEPDC1-204ENST00000489862 USP30Q70CQ3 517 aa4.09□□□□□ -1.76
DEPDC1-204ENST00000489862 C2orf69Q8N8R5 385 aa4.09□□□□□ -1.76
DEPDC1-204ENST00000489862 WDR48Q8TAF3 677 aa4.09□□□□□ -1.76
DEPDC1-204ENST00000489862 TTC8Q8TAM2 541 aa4.09□□□□□ -1.76
DEPDC1-204ENST00000489862 ERCC4Q92889 916 aaPredicted RBP4.09□□□□□ -1.76
DEPDC1-204ENST00000489862 CLUHP3Q96NS8 147 aa4.09□□□□□ -1.76
DEPDC1-204ENST00000489862 OR14A2Q96R54 314 aa4.09□□□□□ -1.76
DEPDC1-204ENST00000489862 PTPRHQ9HD43 1115 aa4.09□□□□□ -1.76
DEPDC1-204ENST00000489862 Q9UFV3 132 aa4.09□□□□□ -1.76
DEPDC1-204ENST00000489862 FBXO10Q9UK96 956 aa4.09□□□□□ -1.76
DEPDC1-204ENST00000489862 GOLGA6L22H0YM25 854 aa4.08□□□□□ -1.76
DEPDC1-204ENST00000489862 ARHGAP6O43182 974 aa4.08□□□□□ -1.76
DEPDC1-204ENST00000489862 COMTP21964 271 aa4.08□□□□□ -1.76
DEPDC1-204ENST00000489862 SDHAP31040 664 aa4.08□□□□□ -1.76
DEPDC1-204ENST00000489862 MRE11P49959 708 aa4.08□□□□□ -1.76
DEPDC1-204ENST00000489862 IRF9Q00978 393 aa4.08□□□□□ -1.76
DEPDC1-204ENST00000489862 MTMR1Q13613 665 aa4.08□□□□□ -1.76
DEPDC1-204ENST00000489862 TCEA2Q15560 299 aa4.08□□□□□ -1.76
DEPDC1-204ENST00000489862 CATSPEREQ5SY80 951 aa4.08□□□□□ -1.76
DEPDC1-204ENST00000489862 TMEM200BQ69YZ2 307 aa4.08□□□□□ -1.76
DEPDC1-204ENST00000489862 Q6ZSN1 163 aa4.08□□□□□ -1.76
DEPDC1-204ENST00000489862 CFHR4Q92496 578 aa4.08□□□□□ -1.76
DEPDC1-204ENST00000489862 SMAD5Q99717 465 aaKnown RBP4.08□□□□□ -1.76
DEPDC1-204ENST00000489862 PUF60Q9UHX1 559 aaKnown RBP4.08□□□□□ -1.76
DEPDC1-204ENST00000489862 INTUQ9ULD6 942 aa4.08□□□□□ -1.76
DEPDC1-204ENST00000489862 NOB1Q9ULX3 412 aaKnown RBP4.08□□□□□ -1.76
DEPDC1-204ENST00000489862 ASB1Q9Y576 335 aa4.08□□□□□ -1.76
DEPDC1-204ENST00000489862 TMEM191CA6NGB0 347 aa4.07□□□□□ -1.76
DEPDC1-204ENST00000489862 IFRD1O00458 451 aaPredicted RBP4.07□□□□□ -1.76
DEPDC1-204ENST00000489862 KIF3BO15066 747 aa4.07□□□□□ -1.76
DEPDC1-204ENST00000489862 HIP1RO75146 1068 aa4.07□□□□□ -1.76
DEPDC1-204ENST00000489862 RAD17O75943 681 aa4.07□□□□□ -1.76
DEPDC1-204ENST00000489862 KRT37O76014 449 aa4.07□□□□□ -1.76
DEPDC1-204ENST00000489862 NUDT3O95989 172 aa4.07□□□□□ -1.76
DEPDC1-204ENST00000489862 FGAP02671 866 aa4.07□□□□□ -1.76
DEPDC1-204ENST00000489862 ATF3P18847 181 aa4.07□□□□□ -1.76
DEPDC1-204ENST00000489862 KRTAP5-9P26371 169 aa4.07□□□□□ -1.76
DEPDC1-204ENST00000489862 ADRA1BP35368 520 aa4.07□□□□□ -1.76
DEPDC1-204ENST00000489862 MEOX1P50221 254 aa4.07□□□□□ -1.76
DEPDC1-204ENST00000489862 EPHB1P54762 984 aa4.07□□□□□ -1.76
DEPDC1-204ENST00000489862 DUSP8Q13202 625 aa4.07□□□□□ -1.76
DEPDC1-204ENST00000489862 NFYCQ13952 458 aa4.07□□□□□ -1.76
DEPDC1-204ENST00000489862 GRAMD4Q6IC98 578 aa4.07□□□□□ -1.76
DEPDC1-204ENST00000489862 NIM1KQ8IY84 436 aa4.07□□□□□ -1.76
DEPDC1-204ENST00000489862 RTKN2Q8IZC4 609 aa4.07□□□□□ -1.76
DEPDC1-204ENST00000489862 MYO1HQ8N1T3 1032 aa4.07□□□□□ -1.76
DEPDC1-204ENST00000489862 AFAP1L2Q8N4X5 818 aa4.07□□□□□ -1.76
DEPDC1-204ENST00000489862 CACTINQ8WUQ7 758 aaKnown RBP4.07□□□□□ -1.76
DEPDC1-204ENST00000489862 TTPALQ9BTX7 342 aa4.07□□□□□ -1.76
DEPDC1-204ENST00000489862 PLA2G12BQ9BX93 195 aa4.07□□□□□ -1.76
DEPDC1-204ENST00000489862 FAM184BQ9ULE4 1060 aa4.07□□□□□ -1.76
DEPDC1-204ENST00000489862 GSG1L2A8MUP6 293 aa4.06□□□□□ -1.76
DEPDC1-204ENST00000489862 M0R2C6 588 aa4.06□□□□□ -1.76
DEPDC1-204ENST00000489862 PLD2O14939 933 aa4.06□□□□□ -1.76
DEPDC1-204ENST00000489862 PLSCR1O15162 318 aa4.06□□□□□ -1.76
DEPDC1-204ENST00000489862 NPTXRO95502 500 aa4.06□□□□□ -1.76
DEPDC1-204ENST00000489862 EYA4O95677 639 aa4.06□□□□□ -1.76
DEPDC1-204ENST00000489862 C1SP09871 688 aa4.06□□□□□ -1.76
DEPDC1-204ENST00000489862 ACO1P21399 889 aaKnown RBP4.06□□□□□ -1.76
DEPDC1-204ENST00000489862 GUCY2FP51841 1108 aa4.06□□□□□ -1.76
DEPDC1-204ENST00000489862 KRTAP5-1Q6L8H4 278 aa4.06□□□□□ -1.76
DEPDC1-204ENST00000489862 KSR2Q6VAB6 950 aa4.06□□□□□ -1.76
DEPDC1-204ENST00000489862 OTOP1Q7RTM1 612 aa4.06□□□□□ -1.76
DEPDC1-204ENST00000489862 ULK2Q8IYT8 1036 aa4.06□□□□□ -1.76
DEPDC1-204ENST00000489862 BCL6BQ8N143 479 aaPredicted RBP4.06□□□□□ -1.76
DEPDC1-204ENST00000489862 OR14K1Q8NGZ2 314 aa4.06□□□□□ -1.76
DEPDC1-204ENST00000489862 CHAC2Q8WUX2 184 aa4.06□□□□□ -1.76
DEPDC1-204ENST00000489862 NINJ1Q92982 152 aa4.06□□□□□ -1.76
DEPDC1-204ENST00000489862 TIFAQ96CG3 184 aa4.06□□□□□ -1.76
DEPDC1-204ENST00000489862 FOXRED1Q96CU9 486 aaPredicted RBP4.06□□□□□ -1.76
DEPDC1-204ENST00000489862 MFSD3Q96ES6 412 aa4.06□□□□□ -1.76
DEPDC1-204ENST00000489862 TARS2Q9BW92 718 aaKnown RBP4.06□□□□□ -1.76
DEPDC1-204ENST00000489862 OR10A2Q9H208 303 aa4.06□□□□□ -1.76
DEPDC1-204ENST00000489862 SLC2A4RGQ9NR83 387 aa4.06□□□□□ -1.76
DEPDC1-204ENST00000489862 MAP3K20Q9NYL2 800 aaKnown RBP4.06□□□□□ -1.76
DEPDC1-204ENST00000489862 TAGLN3Q9UI15 199 aa4.06□□□□□ -1.76
DEPDC1-204ENST00000489862 MAGEL2Q9UJ55 1249 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms