RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 GCOM2Q9BZD3 368 aaPredicted RBP18.27■□□□□ 0.52
USP48-210ENST00000489108 RBM28Q9NW13 759 aaKnown RBP18.27■□□□□ 0.52
USP48-210ENST00000489108 DLL3Q9NYJ7 618 aa18.27■□□□□ 0.52
USP48-210ENST00000489108 NCOR2Q9Y618 2525 aa18.26■□□□□ 0.51
USP48-210ENST00000489108 OTOGLQ3ZCN5 2332 aa18.26■□□□□ 0.51
USP48-210ENST00000489108 CCDC195A0A1B0GUA6 201 aa18.26■□□□□ 0.51
USP48-210ENST00000489108 SLC27A2O14975 620 aa18.26■□□□□ 0.51
USP48-210ENST00000489108 MYBP10242 640 aa18.26■□□□□ 0.51
USP48-210ENST00000489108 NONOQ15233 471 aaKnown RBP eCLIP18.26■□□□□ 0.513e-6■■■■□ 21.1
USP48-210ENST00000489108 EXOC6Q8TAG9 804 aa18.26■□□□□ 0.51
USP48-210ENST00000489108 RSPH1Q8WYR4 309 aa18.26■□□□□ 0.51
USP48-210ENST00000489108 RUBCNQ92622 972 aa18.26■□□□□ 0.51
USP48-210ENST00000489108 MYADMQ96S97 322 aa18.26■□□□□ 0.51
USP48-210ENST00000489108 WDR6Q9NNW5 1121 aaKnown RBP18.26■□□□□ 0.51
USP48-210ENST00000489108 FAM105AQ9NUU6 356 aa18.26■□□□□ 0.51
USP48-210ENST00000489108 FANCMQ8IYD8 2048 aa18.26■□□□□ 0.51
USP48-210ENST00000489108 CACNA1IQ9P0X4 2223 aa18.26■□□□□ 0.51
USP48-210ENST00000489108 CEP250Q9BV73 2442 aa18.25■□□□□ 0.51
USP48-210ENST00000489108 A0A087WZ62 844 aa18.25■□□□□ 0.51
USP48-210ENST00000489108 hCG_1984214I3L0E3 225 aa18.25■□□□□ 0.51
USP48-210ENST00000489108 DDHD2O94830 711 aa18.25■□□□□ 0.51
USP48-210ENST00000489108 SKIP12755 728 aa18.25■□□□□ 0.51
USP48-210ENST00000489108 SETQ01105 290 aaPredicted RBP18.25■□□□□ 0.51
USP48-210ENST00000489108 PRKCEQ02156 737 aa18.25■□□□□ 0.51
USP48-210ENST00000489108 UGCGQ16739 394 aa18.25■□□□□ 0.51
USP48-210ENST00000489108 RTN1Q16799 776 aa18.25■□□□□ 0.51
USP48-210ENST00000489108 PRR16Q569H4 304 aa18.25■□□□□ 0.51
USP48-210ENST00000489108 APOA5Q6Q788 366 aa18.25■□□□□ 0.51
USP48-210ENST00000489108 ZNF713Q8N859 430 aaPredicted RBP18.25■□□□□ 0.51
USP48-210ENST00000489108 CMASQ8NFW8 434 aaPredicted RBP18.25■□□□□ 0.51
USP48-210ENST00000489108 GPR152Q8TDT2 470 aa18.25■□□□□ 0.51
USP48-210ENST00000489108 CNTNAP3BQ96NU0 1288 aa18.25■□□□□ 0.51
USP48-210ENST00000489108 FDXACB1Q9BRP7 624 aaPredicted RBP18.25■□□□□ 0.51
USP48-210ENST00000489108 CNTNAP3Q9BZ76 1288 aa18.25■□□□□ 0.51
USP48-210ENST00000489108 MAN1C1Q9NR34 630 aa18.25■□□□□ 0.51
USP48-210ENST00000489108 DISC1Q9NRI5 854 aa18.25■□□□□ 0.51
USP48-210ENST00000489108 MRPL17Q9NRX2 175 aaKnown RBP18.25■□□□□ 0.51
USP48-210ENST00000489108 DLGAP2Q9P1A6 1054 aa18.25■□□□□ 0.51
USP48-210ENST00000489108 SIT1Q9Y3P8 196 aa18.25■□□□□ 0.51
USP48-210ENST00000489108 DOCK8Q8NF50 2099 aa18.24■□□□□ 0.51
USP48-210ENST00000489108 WDR64B1ANS9 1081 aa18.24■□□□□ 0.51
USP48-210ENST00000489108 C2CD2LO14523 706 aa18.24■□□□□ 0.51
USP48-210ENST00000489108 ZNF623O75123 536 aa18.24■□□□□ 0.51
USP48-210ENST00000489108 ALDH2P05091 517 aa18.24■□□□□ 0.51
USP48-210ENST00000489108 SRFP11831 508 aa18.24■□□□□ 0.51
USP48-210ENST00000489108 TARBP2Q15633 366 aaKnown RBP18.24■□□□□ 0.51
USP48-210ENST00000489108 RSPO4Q2I0M5 234 aaPredicted RBP18.24■□□□□ 0.51
USP48-210ENST00000489108 ZC3H14Q6PJT7 736 aaKnown RBP18.24■□□□□ 0.51
USP48-210ENST00000489108 C1orf210Q8IVY1 113 aa18.24■□□□□ 0.51
USP48-210ENST00000489108 LSG1Q9H089 658 aaKnown RBP18.24■□□□□ 0.51
USP48-210ENST00000489108 EPS15L1Q9UBC2 864 aa18.24■□□□□ 0.51
USP48-210ENST00000489108 BRPF3Q9ULD4 1205 aa18.24■□□□□ 0.51
USP48-210ENST00000489108 PIN4Q9Y237 131 aaKnown RBP18.24■□□□□ 0.51
USP48-210ENST00000489108 FAN1Q9Y2M0 1017 aa18.24■□□□□ 0.51
USP48-210ENST00000489108 INPPL1O15357 1258 aa18.23■□□□□ 0.51
USP48-210ENST00000489108 SFPQP23246 707 aaKnown RBP eCLIP18.23■□□□□ 0.51
USP48-210ENST00000489108 AFF1P51825 1210 aaKnown RBP18.23■□□□□ 0.51
USP48-210ENST00000489108 CDC42EP1Q00587 391 aa18.23■□□□□ 0.51
USP48-210ENST00000489108 CREB3L3Q68CJ9 461 aa18.23■□□□□ 0.51
USP48-210ENST00000489108 PHLDB3Q6NSJ2 640 aa18.23■□□□□ 0.51
USP48-210ENST00000489108 AGMOQ6ZNB7 445 aa18.23■□□□□ 0.51
USP48-210ENST00000489108 TAS1R1Q7RTX1 841 aa18.23■□□□□ 0.51
USP48-210ENST00000489108 STAMQ92783 540 aa18.23■□□□□ 0.51
USP48-210ENST00000489108 CLUHO75153 1309 aa18.23■□□□□ 0.51
USP48-210ENST00000489108 POTEMA6NI47 508 aa18.22■□□□□ 0.51
USP48-210ENST00000489108 NRP1O14786 923 aa18.22■□□□□ 0.51
USP48-210ENST00000489108 ZBTB43O43298 467 aa18.22■□□□□ 0.51
USP48-210ENST00000489108 RFPL2O75678 378 aa18.22■□□□□ 0.51
USP48-210ENST00000489108 AK2P54819 239 aa18.22■□□□□ 0.51
USP48-210ENST00000489108 NECTIN1Q15223 517 aa18.22■□□□□ 0.51
USP48-210ENST00000489108 MTERF2Q49AM1 385 aa18.22■□□□□ 0.51
USP48-210ENST00000489108 POTEGQ6S5H5 508 aa18.22■□□□□ 0.51
USP48-210ENST00000489108 SUMF1Q8NBK3 374 aa18.22■□□□□ 0.51
USP48-210ENST00000489108 URGCPQ8TCY9 931 aa18.22■□□□□ 0.51
USP48-210ENST00000489108 NXPE3Q969Y0 559 aa18.22■□□□□ 0.51
USP48-210ENST00000489108 LENG9Q96B70 501 aa18.22■□□□□ 0.51
USP48-210ENST00000489108 PGBD4Q96DM1 585 aa18.22■□□□□ 0.51
USP48-210ENST00000489108 FAM193BQ96PV7 902 aaPredicted RBP18.22■□□□□ 0.51
USP48-210ENST00000489108 SH2D3AQ9BRG2 576 aa18.22■□□□□ 0.51
USP48-210ENST00000489108 FAM217BQ9NTX9 383 aaPredicted RBP18.22■□□□□ 0.51
USP48-210ENST00000489108 STK39Q9UEW8 545 aa18.22■□□□□ 0.51
USP48-210ENST00000489108 PCDHB2Q9Y5E7 798 aa18.22■□□□□ 0.51
USP48-210ENST00000489108 TMEM150BA6NC51 233 aa18.21■□□□□ 0.51
USP48-210ENST00000489108 TEX28O15482 410 aa18.21■□□□□ 0.51
USP48-210ENST00000489108 CHMP2AO43633 222 aa18.21■□□□□ 0.51
USP48-210ENST00000489108 SPATA31D3P0C874 917 aa18.21■□□□□ 0.51
USP48-210ENST00000489108 GLULP15104 373 aa18.21■□□□□ 0.51
USP48-210ENST00000489108 CDC27P30260 824 aa18.21■□□□□ 0.51
USP48-210ENST00000489108 CIITAP33076 1130 aa18.21■□□□□ 0.51
USP48-210ENST00000489108 DNM2P50570 870 aa18.21■□□□□ 0.51
USP48-210ENST00000489108 RAB27AP51159 221 aa18.21■□□□□ 0.51
USP48-210ENST00000489108 CYP26C1Q6V0L0 522 aa18.21■□□□□ 0.51
USP48-210ENST00000489108 SPATA31D4Q6ZUB0 917 aa18.21■□□□□ 0.51
USP48-210ENST00000489108 CATSPER4Q7RTX7 472 aa18.21■□□□□ 0.51
USP48-210ENST00000489108 RHPN2Q8IUC4 686 aa18.21■□□□□ 0.51
USP48-210ENST00000489108 KSR1Q8IVT5 923 aa18.21■□□□□ 0.51
USP48-210ENST00000489108 ST13P5Q8NFI4 369 aaPredicted RBP18.21■□□□□ 0.51
USP48-210ENST00000489108 SMG7Q92540 1137 aaKnown RBP18.21■□□□□ 0.51
USP48-210ENST00000489108 TCEANC2Q96MN5 208 aa18.21■□□□□ 0.51
USP48-210ENST00000489108 RPS6KC1Q96S38 1066 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms