RNA–Protein interactions for RNA: ENST00000488973.6

HMG20B-213, Transcript of high mobility group 20B, humanhuman

TSL 1 (best)

Gene HMG20B, Length 2,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-213ENST00000488973 GLG1Q92896 1179 aa21.07■□□□□ 0.96
HMG20B-213ENST00000488973 RNF25Q96BH1 459 aaPredicted RBP21.07■□□□□ 0.96
HMG20B-213ENST00000488973 MKNK1Q9BUB5 465 aa21.07■□□□□ 0.96
HMG20B-213ENST00000488973 DNAJC12Q9UKB3 198 aa21.07■□□□□ 0.96
HMG20B-213ENST00000488973 RTN2O75298 545 aa21.07■□□□□ 0.96
HMG20B-213ENST00000488973 AGTP01019 485 aa21.07■□□□□ 0.96
HMG20B-213ENST00000488973 ABCB4P21439 1286 aa21.07■□□□□ 0.96
HMG20B-213ENST00000488973 PLTPP55058 493 aa21.07■□□□□ 0.96
HMG20B-213ENST00000488973 KCTD17Q8N5Z5 321 aa21.07■□□□□ 0.96
HMG20B-213ENST00000488973 ZNF483Q8TF39 744 aaPredicted RBP21.07■□□□□ 0.96
HMG20B-213ENST00000488973 FAM20AQ96MK3 541 aa21.07■□□□□ 0.96
HMG20B-213ENST00000488973 SCLT1Q96NL6 688 aa21.07■□□□□ 0.96
HMG20B-213ENST00000488973 PAIP2Q9BPZ3 127 aaKnown RBP21.07■□□□□ 0.96
HMG20B-213ENST00000488973 TMEM109Q9BVC6 243 aa21.07■□□□□ 0.96
HMG20B-213ENST00000488973 FRMPD4Q14CM0 1322 aa21.07■□□□□ 0.96
HMG20B-213ENST00000488973 ANKRD62A6NC57 917 aa21.06■□□□□ 0.96
HMG20B-213ENST00000488973 MEIS2O14770 477 aa21.06■□□□□ 0.96
HMG20B-213ENST00000488973 RGS16O15492 202 aaPredicted RBP21.06■□□□□ 0.96
HMG20B-213ENST00000488973 VCAM1P19320 739 aa21.06■□□□□ 0.96
HMG20B-213ENST00000488973 SHMT1P34896 483 aa21.06■□□□□ 0.96
HMG20B-213ENST00000488973 FMO5P49326 533 aa21.06■□□□□ 0.96
HMG20B-213ENST00000488973 HADHBP55084 474 aaKnown RBP21.06■□□□□ 0.96
HMG20B-213ENST00000488973 ELF3P78545 371 aaPredicted RBP21.06■□□□□ 0.96
HMG20B-213ENST00000488973 FBXO25Q8TCJ0 367 aa21.06■□□□□ 0.96
HMG20B-213ENST00000488973 SELENOSQ9BQE4 189 aa21.06■□□□□ 0.96
HMG20B-213ENST00000488973 SLC12A4Q9UP95 1085 aa21.06■□□□□ 0.96
HMG20B-213ENST00000488973 SNX24Q9Y343 169 aa21.06■□□□□ 0.96
HMG20B-213ENST00000488973 PHF2O75151 1096 aa21.06■□□□□ 0.96
HMG20B-213ENST00000488973 EYA4O95677 639 aa21.06■□□□□ 0.96
HMG20B-213ENST00000488973 CHRNA3P32297 505 aa21.06■□□□□ 0.96
HMG20B-213ENST00000488973 KCNA1Q09470 495 aa21.06■□□□□ 0.96
HMG20B-213ENST00000488973 ARMC2Q8NEN0 867 aa21.06■□□□□ 0.96
HMG20B-213ENST00000488973 LENG9Q96B70 501 aa21.06■□□□□ 0.96
HMG20B-213ENST00000488973 ARHGEF26Q96DR7 871 aa21.06■□□□□ 0.96
HMG20B-213ENST00000488973 RUSC1Q9BVN2 902 aa21.06■□□□□ 0.96
HMG20B-213ENST00000488973 GPR88Q9GZN0 384 aa21.06■□□□□ 0.96
HMG20B-213ENST00000488973 BHMT2Q9H2M3 363 aa21.06■□□□□ 0.96
HMG20B-213ENST00000488973 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP21.06■□□□□ 0.96
HMG20B-213ENST00000488973 PARP2Q9UGN5 583 aa21.06■□□□□ 0.96
HMG20B-213ENST00000488973 TRPC6Q9Y210 931 aa21.06■□□□□ 0.96
HMG20B-213ENST00000488973 SYNGAP1Q96PV0 1343 aa21.06■□□□□ 0.96
HMG20B-213ENST00000488973 TNFAIP3P21580 790 aa21.05■□□□□ 0.96
HMG20B-213ENST00000488973 COPB2P35606 906 aa21.05■□□□□ 0.96
HMG20B-213ENST00000488973 PTGIRP43119 386 aa21.05■□□□□ 0.96
HMG20B-213ENST00000488973 RWDD2BP57060 319 aa21.05■□□□□ 0.96
HMG20B-213ENST00000488973 SLC29A2Q14542 456 aa21.05■□□□□ 0.96
HMG20B-213ENST00000488973 SLC15A2Q16348 729 aa21.05■□□□□ 0.96
HMG20B-213ENST00000488973 BTNL9Q6UXG8 535 aa21.05■□□□□ 0.96
HMG20B-213ENST00000488973 ADAT2Q7Z6V5 191 aaKnown RBP21.05■□□□□ 0.96
HMG20B-213ENST00000488973 POLR3CQ9BUI4 534 aaPredicted RBP21.05■□□□□ 0.96
HMG20B-213ENST00000488973 GRHL1Q9NZI5 618 aa21.05■□□□□ 0.96
HMG20B-213ENST00000488973 ZMYM2Q9UBW7 1377 aa21.05■□□□□ 0.96
HMG20B-213ENST00000488973 RPTORQ8N122 1335 aa21.05■□□□□ 0.96
HMG20B-213ENST00000488973 PODXLO00592 558 aa21.05■□□□□ 0.96
HMG20B-213ENST00000488973 RHOT2Q8IXI1 618 aa21.05■□□□□ 0.96
HMG20B-213ENST00000488973 CNBD1Q8NA66 436 aa21.05■□□□□ 0.96
HMG20B-213ENST00000488973 ALG3Q92685 438 aa21.05■□□□□ 0.96
HMG20B-213ENST00000488973 THAP2Q9H0W7 228 aa21.05■□□□□ 0.96
HMG20B-213ENST00000488973 STMN4Q9H169 189 aaPredicted RBP21.05■□□□□ 0.96
HMG20B-213ENST00000488973 AZI2Q9H6S1 392 aa21.05■□□□□ 0.96
HMG20B-213ENST00000488973 DDX4Q9NQI0 724 aaKnown RBP21.05■□□□□ 0.96
HMG20B-213ENST00000488973 SPATS2LQ9NUQ6 558 aaKnown RBP21.05■□□□□ 0.96
HMG20B-213ENST00000488973 INTS9Q9NV88 658 aaKnown RBP21.05■□□□□ 0.96
HMG20B-213ENST00000488973 PCYOX1Q9UHG3 505 aa21.05■□□□□ 0.96
HMG20B-213ENST00000488973 MIF4GDA9UHW6 222 aaKnown RBP21.04■□□□□ 0.96
HMG20B-213ENST00000488973 ZNF211Q13398 564 aaPredicted RBP21.04■□□□□ 0.96
HMG20B-213ENST00000488973 RPGRQ92834 1020 aaKnown RBP21.04■□□□□ 0.96
HMG20B-213ENST00000488973 SAMD15Q9P1V8 674 aa21.04■□□□□ 0.96
HMG20B-213ENST00000488973 MTRF1LQ9UGC7 380 aaKnown RBP21.04■□□□□ 0.96
HMG20B-213ENST00000488973 RABGAP1Q9Y3P9 1069 aa21.04■□□□□ 0.96
HMG20B-213ENST00000488973 TLDC2A0PJX2 215 aa21.04■□□□□ 0.96
HMG20B-213ENST00000488973 OPLAHO14841 1288 aa21.04■□□□□ 0.96
HMG20B-213ENST00000488973 ATP6V1G2O95670 118 aa21.04■□□□□ 0.96
HMG20B-213ENST00000488973 GYS1P13807 737 aa21.04■□□□□ 0.96
HMG20B-213ENST00000488973 TRAF1Q13077 416 aa21.04■□□□□ 0.96
HMG20B-213ENST00000488973 LRRC34Q8IZ02 419 aa21.04■□□□□ 0.96
HMG20B-213ENST00000488973 ATP6V0A4Q9HBG4 840 aa21.04■□□□□ 0.96
HMG20B-213ENST00000488973 COG5Q9UP83 839 aa21.04■□□□□ 0.96
HMG20B-213ENST00000488973 QSER1Q2KHR3 1735 aa21.04■□□□□ 0.96
HMG20B-213ENST00000488973 A0A1B0GUA9 196 aa21.03■□□□□ 0.96
HMG20B-213ENST00000488973 KRT13P13646 458 aa21.03■□□□□ 0.96
HMG20B-213ENST00000488973 PPP1R7Q15435 360 aa21.03■□□□□ 0.96
HMG20B-213ENST00000488973 TNFAIP8L3Q5GJ75 292 aa21.03■□□□□ 0.96
HMG20B-213ENST00000488973 C11orf63Q6NUN7 778 aa21.03■□□□□ 0.96
HMG20B-213ENST00000488973 P2RX7Q99572 595 aaKnown RBP21.03■□□□□ 0.96
HMG20B-213ENST00000488973 APEX2Q9UBZ4 518 aa21.03■□□□□ 0.96
HMG20B-213ENST00000488973 VAV3Q9UKW4 847 aa21.03■□□□□ 0.96
HMG20B-213ENST00000488973 ALG6Q9Y672 507 aa21.03■□□□□ 0.96
HMG20B-213ENST00000488973 GGPS1O95749 300 aa21.03■□□□□ 0.96
HMG20B-213ENST00000488973 CTNNA2P26232 953 aa21.03■□□□□ 0.96
HMG20B-213ENST00000488973 IFI35P80217 286 aaPredicted RBP21.03■□□□□ 0.96
HMG20B-213ENST00000488973 KIF22Q14807 665 aa21.03■□□□□ 0.96
HMG20B-213ENST00000488973 TCEAL1Q15170 157 aa21.03■□□□□ 0.96
HMG20B-213ENST00000488973 RINT1Q6NUQ1 792 aa21.03■□□□□ 0.96
HMG20B-213ENST00000488973 HIBCHQ6NVY1 386 aaPredicted RBP21.03■□□□□ 0.96
HMG20B-213ENST00000488973 UBL4BQ8N7F7 174 aa21.03■□□□□ 0.96
HMG20B-213ENST00000488973 NSRP1Q9H0G5 558 aaKnown RBP21.03■□□□□ 0.96
HMG20B-213ENST00000488973 BCAS3Q9H6U6 928 aa21.03■□□□□ 0.96
HMG20B-213ENST00000488973 MYH11P35749 1972 aa21.02■□□□□ 0.96
HMG20B-213ENST00000488973 PFASO15067 1338 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms