RNA–Protein interactions for RNA: ENST00000488896.1

PTPN4-212, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 575 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-212ENST00000488896 CXorf67Q86X51 503 aaPredicted RBP6.8□□□□□ -1.32
PTPN4-212ENST00000488896 TCF25Q9BQ70 676 aa6.8□□□□□ -1.32
PTPN4-212ENST00000488896 C14orf93Q9H972 538 aaKnown RBP6.8□□□□□ -1.32
PTPN4-212ENST00000488896 HECAQ9UBI9 543 aaPredicted RBP6.8□□□□□ -1.32
PTPN4-212ENST00000488896 NEMP1O14524 444 aa6.79□□□□□ -1.32
PTPN4-212ENST00000488896 PLSCR1O15162 318 aa6.79□□□□□ -1.32
PTPN4-212ENST00000488896 JUNP05412 331 aaKnown RBP6.79□□□□□ -1.32
PTPN4-212ENST00000488896 KIR2DL3P43628 341 aa6.79□□□□□ -1.32
PTPN4-212ENST00000488896 DGCR2P98153 550 aa6.79□□□□□ -1.32
PTPN4-212ENST00000488896 CD69Q07108 199 aa6.79□□□□□ -1.32
PTPN4-212ENST00000488896 CRHR2Q13324 411 aa6.79□□□□□ -1.32
PTPN4-212ENST00000488896 MAN2A1Q16706 1144 aa6.79□□□□□ -1.32
PTPN4-212ENST00000488896 SPTY2D1Q68D10 685 aaPredicted RBP6.79□□□□□ -1.32
PTPN4-212ENST00000488896 CCDC62Q6P9F0 684 aa6.79□□□□□ -1.32
PTPN4-212ENST00000488896 FAM111BQ6SJ93 734 aa6.79□□□□□ -1.32
PTPN4-212ENST00000488896 FRMD7Q6ZUT3 714 aa6.79□□□□□ -1.32
PTPN4-212ENST00000488896 HDGFL2Q7Z4V5 671 aaPredicted RBP6.79□□□□□ -1.32
PTPN4-212ENST00000488896 THNSL2Q86YJ6 484 aa6.79□□□□□ -1.32
PTPN4-212ENST00000488896 CDYL2Q8N8U2 506 aa6.79□□□□□ -1.32
PTPN4-212ENST00000488896 ARL8AQ96BM9 186 aa6.79□□□□□ -1.32
PTPN4-212ENST00000488896 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.79□□□□□ -1.32
PTPN4-212ENST00000488896 ING3Q9NXR8 418 aa6.79□□□□□ -1.32
PTPN4-212ENST00000488896 PPP2R3BQ9Y5P8 575 aa6.79□□□□□ -1.32
PTPN4-212ENST00000488896 PFKMP08237 780 aa6.78□□□□□ -1.32
PTPN4-212ENST00000488896 GAAP10253 952 aa6.78□□□□□ -1.32
PTPN4-212ENST00000488896 XPAP23025 273 aaPredicted RBP6.78□□□□□ -1.32
PTPN4-212ENST00000488896 ACRV1P26436 265 aa6.78□□□□□ -1.32
PTPN4-212ENST00000488896 HSD3B2P26439 372 aa6.78□□□□□ -1.32
PTPN4-212ENST00000488896 PPARAQ07869 468 aa6.78□□□□□ -1.32
PTPN4-212ENST00000488896 FOXE3Q13461 319 aa6.78□□□□□ -1.32
PTPN4-212ENST00000488896 ELAVL1Q15717 326 aaKnown RBP6.78□□□□□ -1.32
PTPN4-212ENST00000488896 GAGE13Q4V321 117 aa6.78□□□□□ -1.32
PTPN4-212ENST00000488896 CRIP3Q6Q6R5 217 aa6.78□□□□□ -1.32
PTPN4-212ENST00000488896 STRA8Q7Z7C7 330 aa6.78□□□□□ -1.32
PTPN4-212ENST00000488896 RNF180Q86T96 592 aa6.78□□□□□ -1.32
PTPN4-212ENST00000488896 Q8N1X5 172 aa6.78□□□□□ -1.32
PTPN4-212ENST00000488896 GAB3Q8WWW8 586 aa6.78□□□□□ -1.32
PTPN4-212ENST00000488896 MPHOSPH9Q99550 1183 aa6.78□□□□□ -1.32
PTPN4-212ENST00000488896 OSBPL6Q9BZF3 934 aa6.78□□□□□ -1.32
PTPN4-212ENST00000488896 KCNG1Q9UIX4 513 aa6.78□□□□□ -1.32
PTPN4-212ENST00000488896 GIT1Q9Y2X7 761 aa6.78□□□□□ -1.32
PTPN4-212ENST00000488896 HS3ST3A1Q9Y663 406 aa6.78□□□□□ -1.32
PTPN4-212ENST00000488896 C1SP09871 688 aa6.77□□□□□ -1.33
PTPN4-212ENST00000488896 NPEPPSP55786 919 aa6.77□□□□□ -1.33
PTPN4-212ENST00000488896 DHCR24Q15392 516 aa6.77□□□□□ -1.33
PTPN4-212ENST00000488896 CT47A1Q5JQC4 288 aaPredicted RBP6.77□□□□□ -1.33
PTPN4-212ENST00000488896 FKBP15Q5T1M5 1219 aa6.77□□□□□ -1.33
PTPN4-212ENST00000488896 THEMISQ8N1K5 641 aaPredicted RBP6.77□□□□□ -1.33
PTPN4-212ENST00000488896 SLC16A11Q8NCK7 471 aa6.77□□□□□ -1.33
PTPN4-212ENST00000488896 PIK3C3Q8NEB9 887 aa6.77□□□□□ -1.33
PTPN4-212ENST00000488896 IL17DQ8TAD2 202 aa6.77□□□□□ -1.33
PTPN4-212ENST00000488896 PLEKHG4BQ96PX9 1271 aa6.77□□□□□ -1.33
PTPN4-212ENST00000488896 TTC1Q99614 292 aa6.77□□□□□ -1.33
PTPN4-212ENST00000488896 SCAND2PQ9GZW5 306 aaPredicted RBP6.77□□□□□ -1.33
PTPN4-212ENST00000488896 IFT22Q9H7X7 185 aa6.77□□□□□ -1.33
PTPN4-212ENST00000488896 NPIPB8E9PQR5 432 aa6.76□□□□□ -1.33
PTPN4-212ENST00000488896 AKAP8O43823 692 aaKnown RBP6.76□□□□□ -1.33
PTPN4-212ENST00000488896 ALDH1A2O94788 518 aa6.76□□□□□ -1.33
PTPN4-212ENST00000488896 LY86O95711 162 aa6.76□□□□□ -1.33
PTPN4-212ENST00000488896 LPLP06858 475 aa6.76□□□□□ -1.33
PTPN4-212ENST00000488896 BPIP17213 487 aa6.76□□□□□ -1.33
PTPN4-212ENST00000488896 MANFP55145 182 aaKnown RBP6.76□□□□□ -1.33
PTPN4-212ENST00000488896 MGAT5Q09328 741 aa6.76□□□□□ -1.33
PTPN4-212ENST00000488896 CT83Q5H943 113 aa6.76□□□□□ -1.33
PTPN4-212ENST00000488896 ZFPM1Q8IX07 1006 aa6.76□□□□□ -1.33
PTPN4-212ENST00000488896 GSPT2Q8IYD1 628 aaKnown RBP6.76□□□□□ -1.33
PTPN4-212ENST00000488896 ELOA2Q8IYF1 753 aaPredicted RBP6.76□□□□□ -1.33
PTPN4-212ENST00000488896 CMTM4Q8IZR5 234 aa6.76□□□□□ -1.33
PTPN4-212ENST00000488896 ANKRD35Q8N283 1001 aa6.76□□□□□ -1.33
PTPN4-212ENST00000488896 MB21D1Q8N884 522 aa6.76□□□□□ -1.33
PTPN4-212ENST00000488896 PGBD4Q96DM1 585 aa6.76□□□□□ -1.33
PTPN4-212ENST00000488896 FDXACB1Q9BRP7 624 aaPredicted RBP6.76□□□□□ -1.33
PTPN4-212ENST00000488896 EPC1Q9H2F5 836 aa6.76□□□□□ -1.33
PTPN4-212ENST00000488896 PRDM12Q9H4Q4 367 aa6.76□□□□□ -1.33
PTPN4-212ENST00000488896 EDARQ9UNE0 448 aa6.76□□□□□ -1.33
PTPN4-212ENST00000488896 CYP27B1O15528 508 aa6.75□□□□□ -1.33
PTPN4-212ENST00000488896 STC2O76061 302 aa6.75□□□□□ -1.33
PTPN4-212ENST00000488896 GDF5P43026 501 aa6.75□□□□□ -1.33
PTPN4-212ENST00000488896 MASP1P48740 699 aa6.75□□□□□ -1.33
PTPN4-212ENST00000488896 RRP1BQ14684 758 aaKnown RBP6.75□□□□□ -1.33
PTPN4-212ENST00000488896 FAM214AQ32MH5 1076 aa6.75□□□□□ -1.33
PTPN4-212ENST00000488896 LMBR1LQ6UX01 489 aa6.75□□□□□ -1.33
PTPN4-212ENST00000488896 Q6ZRM9 215 aa6.75□□□□□ -1.33
PTPN4-212ENST00000488896 RASSF3Q86WH2 238 aa6.75□□□□□ -1.33
PTPN4-212ENST00000488896 CHAC2Q8WUX2 184 aa6.75□□□□□ -1.33
PTPN4-212ENST00000488896 MIEF2Q96C03 454 aa6.75□□□□□ -1.33
PTPN4-212ENST00000488896 ZNF503Q96F45 646 aa6.75□□□□□ -1.33
PTPN4-212ENST00000488896 KRTAP4-5Q9BYR2 181 aa6.75□□□□□ -1.33
PTPN4-212ENST00000488896 CAAP1Q9H8G2 361 aa6.75□□□□□ -1.33
PTPN4-212ENST00000488896 TOPORSQ9NS56 1045 aaPredicted RBP6.75□□□□□ -1.33
PTPN4-212ENST00000488896 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.74□□□□□ -1.33
PTPN4-212ENST00000488896 NRP2O60462 931 aa6.74□□□□□ -1.33
PTPN4-212ENST00000488896 FZD7O75084 574 aa6.74□□□□□ -1.33
PTPN4-212ENST00000488896 SOX5P35711 763 aa6.74□□□□□ -1.33
PTPN4-212ENST00000488896 CASRP41180 1078 aa6.74□□□□□ -1.33
PTPN4-212ENST00000488896 SCNN1GP51170 649 aa6.74□□□□□ -1.33
PTPN4-212ENST00000488896 NRG3P56975 720 aa6.74□□□□□ -1.33
PTPN4-212ENST00000488896 PTH1RQ03431 593 aa6.74□□□□□ -1.33
PTPN4-212ENST00000488896 CNGB1Q14028 1251 aaPredicted RBP6.74□□□□□ -1.33
PTPN4-212ENST00000488896 TRIM25Q14258 630 aaKnown RBP6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms