RNA–Protein interactions for RNA: ENST00000488834.5

SSR1-209, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-209ENST00000488834 HAPLN2Q9GZV7 340 aa5.45□□□□□ -1.54
SSR1-209ENST00000488834 PUS7LQ9H0K6 701 aaKnown RBP5.45□□□□□ -1.54
SSR1-209ENST00000488834 QRSL1Q9H0R6 528 aaKnown RBP5.45□□□□□ -1.54
SSR1-209ENST00000488834 PCDH12Q9NPG4 1184 aa5.45□□□□□ -1.54
SSR1-209ENST00000488834 SMPD4Q9NXE4 827 aa5.45□□□□□ -1.54
SSR1-209ENST00000488834 ZBTB21Q9ULJ3 1066 aa5.45□□□□□ -1.54
SSR1-209ENST00000488834 ZFR2Q9UPR6 939 aaKnown RBP5.45□□□□□ -1.54
SSR1-209ENST00000488834 PRAMEF4O60810 478 aa5.44□□□□□ -1.54
SSR1-209ENST00000488834 JUNP05412 331 aaKnown RBP5.44□□□□□ -1.54
SSR1-209ENST00000488834 MTHFD2P13995 350 aa5.44□□□□□ -1.54
SSR1-209ENST00000488834 NCLP19338 710 aaKnown RBP5.44□□□□□ -1.54
SSR1-209ENST00000488834 POU3F3P20264 500 aaPredicted RBP5.44□□□□□ -1.54
SSR1-209ENST00000488834 ADCY7P51828 1080 aa5.44□□□□□ -1.54
SSR1-209ENST00000488834 GUCY2FP51841 1108 aa5.44□□□□□ -1.54
SSR1-209ENST00000488834 CDK17Q00537 523 aa5.44□□□□□ -1.54
SSR1-209ENST00000488834 AMPD3Q01432 767 aa5.44□□□□□ -1.54
SSR1-209ENST00000488834 HHEXQ03014 270 aa5.44□□□□□ -1.54
SSR1-209ENST00000488834 HGFACQ04756 655 aa5.44□□□□□ -1.54
SSR1-209ENST00000488834 ITKQ08881 620 aa5.44□□□□□ -1.54
SSR1-209ENST00000488834 RIN1Q13671 783 aa5.44□□□□□ -1.54
SSR1-209ENST00000488834 TRIM25Q14258 630 aaKnown RBP5.44□□□□□ -1.54
SSR1-209ENST00000488834 CLUL1Q15846 466 aa5.44□□□□□ -1.54
SSR1-209ENST00000488834 GAREM2Q75VX8 874 aa5.44□□□□□ -1.54
SSR1-209ENST00000488834 NECAB2Q7Z6G3 386 aa5.44□□□□□ -1.54
SSR1-209ENST00000488834 PRRT2Q7Z6L0 340 aaPredicted RBP5.44□□□□□ -1.54
SSR1-209ENST00000488834 CMIPQ8IY22 773 aa5.44□□□□□ -1.54
SSR1-209ENST00000488834 UNC5BQ8IZJ1 945 aa5.44□□□□□ -1.54
SSR1-209ENST00000488834 CNTD1Q8N815 330 aa5.44□□□□□ -1.54
SSR1-209ENST00000488834 CFHR4Q92496 578 aa5.44□□□□□ -1.54
SSR1-209ENST00000488834 RABGGTAQ92696 567 aa5.44□□□□□ -1.54
SSR1-209ENST00000488834 ARL8AQ96BM9 186 aa5.44□□□□□ -1.54
SSR1-209ENST00000488834 MTMR8Q96EF0 704 aa5.44□□□□□ -1.54
SSR1-209ENST00000488834 TMEM176AQ96HP8 235 aa5.44□□□□□ -1.54
SSR1-209ENST00000488834 RBM15Q96T37 977 aaKnown RBP eCLIP5.44□□□□□ -1.544e-9■□□□□ 10.4
SSR1-209ENST00000488834 NELFAQ9H3P2 528 aa5.44□□□□□ -1.54
SSR1-209ENST00000488834 MSL2Q9HCI7 577 aa5.44□□□□□ -1.54
SSR1-209ENST00000488834 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.44□□□□□ -1.54
SSR1-209ENST00000488834 DNAJC28Q9NX36 388 aa5.44□□□□□ -1.54
SSR1-209ENST00000488834 DPP7Q9UHL4 492 aa5.44□□□□□ -1.54
SSR1-209ENST00000488834 ST6GALNAC2Q9UJ37 374 aa5.44□□□□□ -1.54
SSR1-209ENST00000488834 TCAF1Q9Y4C2 921 aa5.44□□□□□ -1.54
SSR1-209ENST00000488834 CDY2AQ9Y6F7 541 aa5.44□□□□□ -1.54
SSR1-209ENST00000488834 NCANO14594 1321 aa5.44□□□□□ -1.54
SSR1-209ENST00000488834 A0A0A6YYK5 440 aaPredicted RBP5.43□□□□□ -1.54
SSR1-209ENST00000488834 ALG1L2C9J202 215 aa5.43□□□□□ -1.54
SSR1-209ENST00000488834 MATN2O00339 956 aa5.43□□□□□ -1.54
SSR1-209ENST00000488834 ALDH1A2O94788 518 aa5.43□□□□□ -1.54
SSR1-209ENST00000488834 LY86O95711 162 aa5.43□□□□□ -1.54
SSR1-209ENST00000488834 VSIG10L2P0DP72 767 aa5.43□□□□□ -1.54
SSR1-209ENST00000488834 KIR2DL3P43628 341 aa5.43□□□□□ -1.54
SSR1-209ENST00000488834 CDKN1CP49918 316 aaPredicted RBP5.43□□□□□ -1.54
SSR1-209ENST00000488834 NPEPPSP55786 919 aa5.43□□□□□ -1.54
SSR1-209ENST00000488834 CCT2P78371 535 aaKnown RBP5.43□□□□□ -1.54
SSR1-209ENST00000488834 CD69Q07108 199 aa5.43□□□□□ -1.54
SSR1-209ENST00000488834 GRM7Q14831 915 aa5.43□□□□□ -1.54
SSR1-209ENST00000488834 GAGE13Q4V321 117 aa5.43□□□□□ -1.54
SSR1-209ENST00000488834 TOR2AQ5JU69 321 aa5.43□□□□□ -1.54
SSR1-209ENST00000488834 ZNF585AQ6P3V2 769 aa5.43□□□□□ -1.54
SSR1-209ENST00000488834 PRPF38AQ8NAV1 312 aaKnown RBP5.43□□□□□ -1.54
SSR1-209ENST00000488834 LMBR1Q8WVP7 490 aa5.43□□□□□ -1.54
SSR1-209ENST00000488834 AUTS2Q8WXX7 1259 aa5.43□□□□□ -1.54
SSR1-209ENST00000488834 C8orf49Q96NF6 230 aa5.43□□□□□ -1.54
SSR1-209ENST00000488834 SOX7Q9BT81 388 aa5.43□□□□□ -1.54
SSR1-209ENST00000488834 KRTAP4-11Q9BYQ6 195 aa5.43□□□□□ -1.54
SSR1-209ENST00000488834 EPC1Q9H2F5 836 aa5.43□□□□□ -1.54
SSR1-209ENST00000488834 IL23AQ9NPF7 189 aa5.43□□□□□ -1.54
SSR1-209ENST00000488834 EVLQ9UI08 416 aaPredicted RBP5.43□□□□□ -1.54
SSR1-209ENST00000488834 PHLDB1Q86UU1 1377 aa5.42□□□□□ -1.54
SSR1-209ENST00000488834 hCG_2014768A0A024R1R8 64 aa5.42□□□□□ -1.54
SSR1-209ENST00000488834 LOC105371045A0A1W2PR82 267 aa5.42□□□□□ -1.54
SSR1-209ENST00000488834 UBE2QL1A1L167 161 aa5.42□□□□□ -1.54
SSR1-209ENST00000488834 PRRG2O14669 202 aa5.42□□□□□ -1.54
SSR1-209ENST00000488834 NRP1O14786 923 aa5.42□□□□□ -1.54
SSR1-209ENST00000488834 FOXS1O43638 330 aa5.42□□□□□ -1.54
SSR1-209ENST00000488834 ZNF623O75123 536 aa5.42□□□□□ -1.54
SSR1-209ENST00000488834 RAD17O75943 681 aa5.42□□□□□ -1.54
SSR1-209ENST00000488834 GAAP10253 952 aa5.42□□□□□ -1.54
SSR1-209ENST00000488834 COMTP21964 271 aa5.42□□□□□ -1.54
SSR1-209ENST00000488834 MSX2P35548 267 aaPredicted RBP5.42□□□□□ -1.54
SSR1-209ENST00000488834 ANAPC15P60006 121 aa5.42□□□□□ -1.54
SSR1-209ENST00000488834 MRPS9P82933 396 aaKnown RBP5.42□□□□□ -1.54
SSR1-209ENST00000488834 KLF1Q13351 362 aaPredicted RBP5.42□□□□□ -1.54
SSR1-209ENST00000488834 ICAM4Q14773 271 aa5.42□□□□□ -1.54
SSR1-209ENST00000488834 SPATS1Q496A3 300 aa5.42□□□□□ -1.54
SSR1-209ENST00000488834 FUKQ8N0W3 1084 aa5.42□□□□□ -1.54
SSR1-209ENST00000488834 TTC9BQ8N6N2 239 aa5.42□□□□□ -1.54
SSR1-209ENST00000488834 PAWRQ96IZ0 340 aaKnown RBP5.42□□□□□ -1.54
SSR1-209ENST00000488834 FDXACB1Q9BRP7 624 aaPredicted RBP5.42□□□□□ -1.54
SSR1-209ENST00000488834 PLA2G3Q9NZ20 509 aa5.42□□□□□ -1.54
SSR1-209ENST00000488834 TMPRSS11EQ9UL52 423 aa5.42□□□□□ -1.54
SSR1-209ENST00000488834 PMS2P1A4D2B8 440 aa5.41□□□□□ -1.54
SSR1-209ENST00000488834 KATNA1O75449 491 aa5.41□□□□□ -1.54
SSR1-209ENST00000488834 SEC24DO94855 1032 aaPredicted RBP5.41□□□□□ -1.54
SSR1-209ENST00000488834 MAGEA10P43363 369 aaPredicted RBP5.41□□□□□ -1.54
SSR1-209ENST00000488834 EVA1CP58658 441 aa5.41□□□□□ -1.54
SSR1-209ENST00000488834 SRSF2Q01130 221 aaKnown RBP5.41□□□□□ -1.54
SSR1-209ENST00000488834 DUSP2Q05923 314 aa5.41□□□□□ -1.54
SSR1-209ENST00000488834 LCE5AQ5TCM9 118 aa5.41□□□□□ -1.54
SSR1-209ENST00000488834 PGM2L1Q6PCE3 622 aa5.41□□□□□ -1.54
SSR1-209ENST00000488834 FAM180AQ6UWF9 173 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms