RNA–Protein interactions for RNA: ENST00000488571.1

SNU13-208, Transcript of small nuclear ribonucleoprotein 13, human

TSL 5

Gene SNU13, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNU13-208	ENST00000488571	ZBP1	Q9H171	429 aa		12.81	□□□□□ -0.36
SNU13-208	ENST00000488571	UNC45A	Q9H3U1	944 aa		12.81	□□□□□ -0.36
SNU13-208	ENST00000488571	NRBP2	Q9NSY0	501 aa		12.81	□□□□□ -0.36
SNU13-208	ENST00000488571	NAP1L2	Q9ULW6	460 aa	Predicted RBP	12.81	□□□□□ -0.36
SNU13-208	ENST00000488571	ZFHX2	Q9C0A1	2572 aa	Predicted RBP	12.81	□□□□□ -0.36
SNU13-208	ENST00000488571	CCDC196	A0A1B0GTZ2	297 aa		12.8	□□□□□ -0.36
SNU13-208	ENST00000488571	TMEM150B	A6NC51	233 aa		12.8	□□□□□ -0.36
SNU13-208	ENST00000488571	CHMP2A	O43633	222 aa		12.8	□□□□□ -0.36
SNU13-208	ENST00000488571	STBD1	O95210	358 aa		12.8	□□□□□ -0.36
SNU13-208	ENST00000488571	CXCL14	O95715	111 aa		12.8	□□□□□ -0.36
SNU13-208	ENST00000488571	ASGR2	P07307	311 aa		12.8	□□□□□ -0.36
SNU13-208	ENST00000488571	GNA11	P29992	359 aa		12.8	□□□□□ -0.36
SNU13-208	ENST00000488571	PHKA2	P46019	1235 aa		12.8	□□□□□ -0.36
SNU13-208	ENST00000488571	ALDH7A1	P49419	539 aa	Known RBP	12.8	□□□□□ -0.36
SNU13-208	ENST00000488571	TBC1D8B	Q0IIM8	1120 aa		12.8	□□□□□ -0.36
SNU13-208	ENST00000488571	KRT32	Q14532	448 aa		12.8	□□□□□ -0.36
SNU13-208	ENST00000488571	CES5A	Q6NT32	575 aa		12.8	□□□□□ -0.36
SNU13-208	ENST00000488571		Q6ZUG5	572 aa		12.8	□□□□□ -0.36
SNU13-208	ENST00000488571	UBALD2	Q8IYN6	164 aa		12.8	□□□□□ -0.36
SNU13-208	ENST00000488571	VPS52	Q8N1B4	723 aa		12.8	□□□□□ -0.36
SNU13-208	ENST00000488571	C12orf76	Q8N812	135 aa	Predicted RBP	12.8	□□□□□ -0.36
SNU13-208	ENST00000488571	TMEM105	Q8N8V8	129 aa		12.8	□□□□□ -0.36
SNU13-208	ENST00000488571	BCL7C	Q8WUZ0	217 aa	Predicted RBP	12.8	□□□□□ -0.36
SNU13-208	ENST00000488571	NLRP7	Q8WX94	980 aa		12.8	□□□□□ -0.36
SNU13-208	ENST00000488571	AUTS2	Q8WXX7	1259 aa		12.8	□□□□□ -0.36
SNU13-208	ENST00000488571	BRF1	Q92994	677 aa		12.8	□□□□□ -0.36
SNU13-208	ENST00000488571	CCDC136	Q96JN2	1154 aa		12.8	□□□□□ -0.36
SNU13-208	ENST00000488571	SCLT1	Q96NL6	688 aa		12.8	□□□□□ -0.36
SNU13-208	ENST00000488571	RIT2	Q99578	217 aa		12.8	□□□□□ -0.36
SNU13-208	ENST00000488571	TRAIP	Q9BWF2	469 aa		12.8	□□□□□ -0.36
SNU13-208	ENST00000488571	MRPL9	Q9BYD2	267 aa	Known RBP	12.8	□□□□□ -0.36
SNU13-208	ENST00000488571	DACT1	Q9NYF0	836 aa		12.8	□□□□□ -0.36
SNU13-208	ENST00000488571	IRAK3	Q9Y616	596 aa		12.8	□□□□□ -0.36
SNU13-208	ENST00000488571	DMD	P11532	3685 aa		12.8	□□□□□ -0.36
SNU13-208	ENST00000488571	IGKV6-21	A0A0C4DH24	114 aa		12.79	□□□□□ -0.36
SNU13-208	ENST00000488571	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	12.79	□□□□□ -0.36
SNU13-208	ENST00000488571	MEIS3P2	A8K0S8	358 aa		12.79	□□□□□ -0.36
SNU13-208	ENST00000488571	PROB1	E7EW31	1015 aa		12.79	□□□□□ -0.36
SNU13-208	ENST00000488571	B4GALT3	O60512	393 aa		12.79	□□□□□ -0.36
SNU13-208	ENST00000488571	GAS7	O60861	476 aa		12.79	□□□□□ -0.36
SNU13-208	ENST00000488571	ZC3H11A	O75152	810 aa	Known RBP eCLIP	12.79	□□□□□ -0.36
SNU13-208	ENST00000488571	PSMD10	O75832	226 aa		12.79	□□□□□ -0.36
SNU13-208	ENST00000488571	HMGB1	P09429	215 aa	Known RBP	12.79	□□□□□ -0.36
SNU13-208	ENST00000488571	EPCAM	P16422	314 aa		12.79	□□□□□ -0.36
SNU13-208	ENST00000488571	SFN	P31947	248 aa		12.79	□□□□□ -0.36
SNU13-208	ENST00000488571	MTHFR	P42898	656 aa		12.79	□□□□□ -0.36
SNU13-208	ENST00000488571	JAK3	P52333	1124 aa		12.79	□□□□□ -0.36
SNU13-208	ENST00000488571	RARS2	Q5T160	578 aa	Known RBP	12.79	□□□□□ -0.36
SNU13-208	ENST00000488571	KIAA1841	Q6NSI8	718 aa		12.79	□□□□□ -0.36
SNU13-208	ENST00000488571	B3GNT9	Q6UX72	402 aa		12.79	□□□□□ -0.36
SNU13-208	ENST00000488571	SLC22A17	Q8WUG5	538 aa		12.79	□□□□□ -0.36
SNU13-208	ENST00000488571	KCNB2	Q92953	911 aa		12.79	□□□□□ -0.36
SNU13-208	ENST00000488571	LPP	Q93052	612 aa		12.79	□□□□□ -0.36
SNU13-208	ENST00000488571	TMEM169	Q96HH4	297 aa		12.79	□□□□□ -0.36
SNU13-208	ENST00000488571	SH2D3A	Q9BRG2	576 aa		12.79	□□□□□ -0.36
SNU13-208	ENST00000488571	VN1R3	Q9BXE9	311 aa		12.79	□□□□□ -0.36
SNU13-208	ENST00000488571	NIFK	Q9BYG3	293 aa	Known RBP	12.79	□□□□□ -0.36
SNU13-208	ENST00000488571	IRF2BPL	Q9H1B7	796 aa		12.79	□□□□□ -0.36
SNU13-208	ENST00000488571	CHST12	Q9NRB3	414 aa		12.79	□□□□□ -0.36
SNU13-208	ENST00000488571	VPS54	Q9P1Q0	977 aa		12.79	□□□□□ -0.36
SNU13-208	ENST00000488571		A0A087WZ62	844 aa		12.78	□□□□□ -0.36
SNU13-208	ENST00000488571	CA8	P35219	290 aa		12.78	□□□□□ -0.36
SNU13-208	ENST00000488571	USP11	P51784	963 aa		12.78	□□□□□ -0.36
SNU13-208	ENST00000488571	FGD1	P98174	961 aa		12.78	□□□□□ -0.36
SNU13-208	ENST00000488571	LONRF3	Q496Y0	759 aa		12.78	□□□□□ -0.36
SNU13-208	ENST00000488571	LRCH2	Q5VUJ6	765 aa		12.78	□□□□□ -0.36
SNU13-208	ENST00000488571	DDX53	Q86TM3	631 aa	Known RBP	12.78	□□□□□ -0.36
SNU13-208	ENST00000488571	ZDHHC14	Q8IZN3	488 aa		12.78	□□□□□ -0.36
SNU13-208	ENST00000488571	FBXL16	Q8N461	479 aa		12.78	□□□□□ -0.36
SNU13-208	ENST00000488571	BICD2	Q8TD16	824 aa		12.78	□□□□□ -0.36
SNU13-208	ENST00000488571	IGSF21	Q96ID5	467 aa		12.78	□□□□□ -0.36
SNU13-208	ENST00000488571	FDXACB1	Q9BRP7	624 aa	Predicted RBP	12.78	□□□□□ -0.36
SNU13-208	ENST00000488571	TEKT3	Q9BXF9	490 aa		12.78	□□□□□ -0.36
SNU13-208	ENST00000488571	RNF26	Q9BY78	433 aa	Predicted RBP	12.78	□□□□□ -0.36
SNU13-208	ENST00000488571	AGXT2	Q9BYV1	514 aa		12.78	□□□□□ -0.36
SNU13-208	ENST00000488571	GCOM2	Q9BZD3	368 aa	Predicted RBP	12.78	□□□□□ -0.36
SNU13-208	ENST00000488571	NRDE2	Q9H7Z3	1164 aa		12.78	□□□□□ -0.36
SNU13-208	ENST00000488571	TBC1D13	Q9NVG8	400 aa		12.78	□□□□□ -0.36
SNU13-208	ENST00000488571	DZANK1	Q9NVP4	752 aa		12.78	□□□□□ -0.36
SNU13-208	ENST00000488571	C2orf16	Q68DN1	1984 aa		12.78	□□□□□ -0.36
SNU13-208	ENST00000488571	GALT	P07902	379 aa		12.77	□□□□□ -0.37
SNU13-208	ENST00000488571	CTSA	P10619	480 aa		12.77	□□□□□ -0.37
SNU13-208	ENST00000488571	NBL1	P41271	181 aa		12.77	□□□□□ -0.37
SNU13-208	ENST00000488571	POLG	P54098	1239 aa	Predicted RBP	12.77	□□□□□ -0.37
SNU13-208	ENST00000488571	MTERF2	Q49AM1	385 aa		12.77	□□□□□ -0.37
SNU13-208	ENST00000488571		Q4G0T1	1027 aa		12.77	□□□□□ -0.37
SNU13-208	ENST00000488571	XKR3	Q5GH77	459 aa		12.77	□□□□□ -0.37
SNU13-208	ENST00000488571	ASCL5	Q7RTU5	278 aa		12.77	□□□□□ -0.37
SNU13-208	ENST00000488571	TDRD5	Q8NAT2	981 aa	Known RBP	12.77	□□□□□ -0.37
SNU13-208	ENST00000488571	CCDC148	Q8NFR7	591 aa		12.77	□□□□□ -0.37
SNU13-208	ENST00000488571	RDM1	Q8NG50	284 aa		12.77	□□□□□ -0.37
SNU13-208	ENST00000488571	RSPH1	Q8WYR4	309 aa		12.77	□□□□□ -0.37
SNU13-208	ENST00000488571	FAM105A	Q9NUU6	356 aa		12.77	□□□□□ -0.37
SNU13-208	ENST00000488571	DNAJB4	Q9UDY4	337 aa		12.77	□□□□□ -0.37
SNU13-208	ENST00000488571	LIMD1	Q9UGP4	676 aa		12.77	□□□□□ -0.37
SNU13-208	ENST00000488571	SEPT9	Q9UHD8	586 aa	Predicted RBP	12.77	□□□□□ -0.37
SNU13-208	ENST00000488571	PIN4	Q9Y237	131 aa	Known RBP	12.77	□□□□□ -0.37
SNU13-208	ENST00000488571	UST	Q9Y2C2	406 aa		12.77	□□□□□ -0.37
SNU13-208	ENST00000488571	SNX14	Q9Y5W7	946 aa		12.77	□□□□□ -0.37
SNU13-208	ENST00000488571	VPS13A	Q96RL7	3174 aa		12.76	□□□□□ -0.37

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