RNA–Protein interactions for RNA: ENST00000488337.5

SIK3-212, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 4,220 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-212ENST00000488337 CEP63Q96MT8 703 aa6.82□□□□□ -1.32
SIK3-212ENST00000488337 GPR101Q96P66 508 aaPredicted RBP6.82□□□□□ -1.32
SIK3-212ENST00000488337 SENP7Q9BQF6 1050 aa6.82□□□□□ -1.32
SIK3-212ENST00000488337 CCSER1Q9C0I3 900 aa6.82□□□□□ -1.32
SIK3-212ENST00000488337 LRRC27Q9C0I9 530 aa6.82□□□□□ -1.32
SIK3-212ENST00000488337 KLHL3Q9UH77 587 aa6.82□□□□□ -1.32
SIK3-212ENST00000488337 DBNLQ9UJU6 430 aaKnown RBP6.82□□□□□ -1.32
SIK3-212ENST00000488337 ZNF711Q9Y462 761 aa6.82□□□□□ -1.32
SIK3-212ENST00000488337 MED1Q15648 1581 aaPredicted RBP6.82□□□□□ -1.32
SIK3-212ENST00000488337 SPDYE16A6NNV3 312 aaPredicted RBP6.82□□□□□ -1.32
SIK3-212ENST00000488337 RNMTO43148 476 aaKnown RBP6.82□□□□□ -1.32
SIK3-212ENST00000488337 ZNF862O60290 1169 aa6.82□□□□□ -1.32
SIK3-212ENST00000488337 PABPC1P11940 636 aaKnown RBP6.82□□□□□ -1.32
SIK3-212ENST00000488337 MARCKSP29966 332 aaPredicted RBP6.82□□□□□ -1.32
SIK3-212ENST00000488337 WASHC5Q12768 1159 aa6.82□□□□□ -1.32
SIK3-212ENST00000488337 PHKG1Q16816 387 aa6.82□□□□□ -1.32
SIK3-212ENST00000488337 TMTC4Q5T4D3 741 aa6.82□□□□□ -1.32
SIK3-212ENST00000488337 NDUFAF5Q5TEU4 345 aa6.82□□□□□ -1.32
SIK3-212ENST00000488337 NT5DC1Q5TFE4 455 aa6.82□□□□□ -1.32
SIK3-212ENST00000488337 TTC23LQ6PF05 361 aa6.82□□□□□ -1.32
SIK3-212ENST00000488337 CPLX4Q7Z7G2 160 aa6.82□□□□□ -1.32
SIK3-212ENST00000488337 SLC38A6Q8IZM9 456 aa6.82□□□□□ -1.32
SIK3-212ENST00000488337 ARHGAP24Q8N264 748 aa6.82□□□□□ -1.32
SIK3-212ENST00000488337 SLC17A8Q8NDX2 589 aa6.82□□□□□ -1.32
SIK3-212ENST00000488337 DGCR14Q96DF8 476 aaKnown RBP6.82□□□□□ -1.32
SIK3-212ENST00000488337 FAM20AQ96MK3 541 aa6.82□□□□□ -1.32
SIK3-212ENST00000488337 FHDC1Q9C0D6 1143 aaPredicted RBP6.82□□□□□ -1.32
SIK3-212ENST00000488337 NDEL1Q9GZM8 345 aa6.82□□□□□ -1.32
SIK3-212ENST00000488337 HAUS4Q9H6D7 363 aa6.82□□□□□ -1.32
SIK3-212ENST00000488337 TELO2Q9Y4R8 837 aa6.82□□□□□ -1.32
SIK3-212ENST00000488337 CEP170BQ9Y4F5 1589 aaPredicted RBP6.82□□□□□ -1.32
SIK3-212ENST00000488337 GOLGA8BA8MQT2 603 aa6.82□□□□□ -1.32
SIK3-212ENST00000488337 ATP5J2-PTCD1G3V325 749 aa6.82□□□□□ -1.32
SIK3-212ENST00000488337 PTCD1O75127 700 aaKnown RBP6.82□□□□□ -1.32
SIK3-212ENST00000488337 EIF2S1P05198 315 aaKnown RBP6.82□□□□□ -1.32
SIK3-212ENST00000488337 ABCB1P08183 1280 aaPredicted RBP6.82□□□□□ -1.32
SIK3-212ENST00000488337 IFIT1P09914 478 aaKnown RBP6.82□□□□□ -1.32
SIK3-212ENST00000488337 SERPINB3P29508 390 aa6.82□□□□□ -1.32
SIK3-212ENST00000488337 HAND2P61296 217 aa6.82□□□□□ -1.32
SIK3-212ENST00000488337 MDM2Q00987 491 aaPredicted RBP6.82□□□□□ -1.32
SIK3-212ENST00000488337 HNRNPDQ14103 355 aaKnown RBP6.82□□□□□ -1.32
SIK3-212ENST00000488337 PCSK7Q16549 785 aa6.82□□□□□ -1.32
SIK3-212ENST00000488337 CROCCP3Q8IVE0 287 aa6.82□□□□□ -1.32
SIK3-212ENST00000488337 SAMD14Q8IZD0 417 aaPredicted RBP6.82□□□□□ -1.32
SIK3-212ENST00000488337 FITM2Q8N6M3 262 aa6.82□□□□□ -1.32
SIK3-212ENST00000488337 AIDAQ96BJ3 306 aa6.82□□□□□ -1.32
SIK3-212ENST00000488337 PSKH2Q96QS6 385 aa6.82□□□□□ -1.32
SIK3-212ENST00000488337 MUC3BQ9H195 1237 aa6.82□□□□□ -1.32
SIK3-212ENST00000488337 RXFP1Q9HBX9 757 aa6.82□□□□□ -1.32
SIK3-212ENST00000488337 TCF7L2Q9NQB0 619 aa6.82□□□□□ -1.32
SIK3-212ENST00000488337 NDFIP2Q9NV92 336 aa6.82□□□□□ -1.32
SIK3-212ENST00000488337 PCSK1NQ9UHG2 260 aa6.82□□□□□ -1.32
SIK3-212ENST00000488337 RFX7Q2KHR2 1363 aa6.82□□□□□ -1.32
SIK3-212ENST00000488337 RNF225M0QZC1 329 aaPredicted RBP6.81□□□□□ -1.32
SIK3-212ENST00000488337 B3GALNT1O75752 331 aa6.81□□□□□ -1.32
SIK3-212ENST00000488337 MMP13P45452 471 aa6.81□□□□□ -1.32
SIK3-212ENST00000488337 CARSP49589 748 aaKnown RBP6.81□□□□□ -1.32
SIK3-212ENST00000488337 FXR1P51114 621 aaKnown RBP eCLIP6.81□□□□□ -1.32
SIK3-212ENST00000488337 KIF11P52732 1056 aa6.81□□□□□ -1.32
SIK3-212ENST00000488337 GBE1Q04446 702 aa6.81□□□□□ -1.32
SIK3-212ENST00000488337 AP1B1Q10567 949 aa6.81□□□□□ -1.32
SIK3-212ENST00000488337 SLC39A6Q13433 755 aa6.81□□□□□ -1.32
SIK3-212ENST00000488337 GCKRQ14397 625 aa6.81□□□□□ -1.32
SIK3-212ENST00000488337 CERKLQ49MI3 558 aaPredicted RBP6.81□□□□□ -1.32
SIK3-212ENST00000488337 ELMSAN1Q6PJG2 1045 aa6.81□□□□□ -1.32
SIK3-212ENST00000488337 SLC30A10Q6XR72 485 aa6.81□□□□□ -1.32
SIK3-212ENST00000488337 B3GNT6Q6ZMB0 384 aa6.81□□□□□ -1.32
SIK3-212ENST00000488337 SLC51BQ86UW2 128 aa6.81□□□□□ -1.32
SIK3-212ENST00000488337 VPS36Q86VN1 386 aa6.81□□□□□ -1.32
SIK3-212ENST00000488337 FOXP4Q8IVH2 680 aaPredicted RBP6.81□□□□□ -1.32
SIK3-212ENST00000488337 FAM133AQ8N9E0 248 aa6.81□□□□□ -1.32
SIK3-212ENST00000488337 CCDC110Q8TBZ0 833 aa6.81□□□□□ -1.32
SIK3-212ENST00000488337 SCG3Q8WXD2 468 aaKnown RBP6.81□□□□□ -1.32
SIK3-212ENST00000488337 IFT74Q96LB3 600 aa6.81□□□□□ -1.32
SIK3-212ENST00000488337 PRICKLE1Q96MT3 831 aaPredicted RBP6.81□□□□□ -1.32
SIK3-212ENST00000488337 DCLRE1BQ9H816 532 aa6.81□□□□□ -1.32
SIK3-212ENST00000488337 DISC1Q9NRI5 854 aa6.81□□□□□ -1.32
SIK3-212ENST00000488337 MOCS1Q9NZB8 636 aa6.81□□□□□ -1.32
SIK3-212ENST00000488337 PNMA3Q9UL41 463 aa6.81□□□□□ -1.32
SIK3-212ENST00000488337 WWC3Q9ULE0 1092 aa6.81□□□□□ -1.32
SIK3-212ENST00000488337 KLF18A0A0U1RQI7 1052 aa6.81□□□□□ -1.32
SIK3-212ENST00000488337 PDE5AO76074 875 aa6.81□□□□□ -1.32
SIK3-212ENST00000488337 ERCC5P28715 1186 aaPredicted RBP6.81□□□□□ -1.32
SIK3-212ENST00000488337 WEE1P30291 646 aa6.81□□□□□ -1.32
SIK3-212ENST00000488337 CREB5Q02930 508 aa6.81□□□□□ -1.32
SIK3-212ENST00000488337 PRKG1Q13976 671 aa6.81□□□□□ -1.32
SIK3-212ENST00000488337 WTAPQ15007 396 aa6.81□□□□□ -1.32
SIK3-212ENST00000488337 SNX30Q5VWJ9 437 aa6.81□□□□□ -1.32
SIK3-212ENST00000488337 CAPN12Q6ZSI9 719 aa6.81□□□□□ -1.32
SIK3-212ENST00000488337 PATL1Q86TB9 770 aaKnown RBP6.81□□□□□ -1.32
SIK3-212ENST00000488337 LINC00301Q8NCQ3 95 aa6.81□□□□□ -1.32
SIK3-212ENST00000488337 EMILIN3Q9NT22 766 aa6.81□□□□□ -1.32
SIK3-212ENST00000488337 DCAF16Q9NXF7 216 aa6.81□□□□□ -1.32
SIK3-212ENST00000488337 SALL4Q9UJQ4 1053 aa6.81□□□□□ -1.32
SIK3-212ENST00000488337 SNX12Q9UMY4 172 aa6.81□□□□□ -1.32
SIK3-212ENST00000488337 MROH7-TTC4A0A0A0MT08 1334 aa6.81□□□□□ -1.32
SIK3-212ENST00000488337 A0A0B4J203 849 aa6.81□□□□□ -1.32
SIK3-212ENST00000488337 SPECC1L-ADORA2AF8WAN1 911 aa6.81□□□□□ -1.32
SIK3-212ENST00000488337 RSL1D1O76021 490 aaKnown RBP6.81□□□□□ -1.32
SIK3-212ENST00000488337 YEATS4O95619 227 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms