RNA–Protein interactions for RNA: ENST00000488206.5

TM2D1-208, Transcript of TM2 domain containing 1, humanhuman

TSL 5

Gene TM2D1, Length 921 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM2D1-208ENST00000488206 PCBP1Q15365 356 aaKnown RBP eCLIP17.28■□□□□ 0.36
TM2D1-208ENST00000488206 HERC4Q5GLZ8 1057 aaPredicted RBP17.28■□□□□ 0.36
TM2D1-208ENST00000488206 MFSD5Q6N075 450 aa17.28■□□□□ 0.36
TM2D1-208ENST00000488206 TSHZ1Q6ZSZ6 1077 aa17.28■□□□□ 0.36
TM2D1-208ENST00000488206 KIFC3Q9BVG8 833 aa17.28■□□□□ 0.36
TM2D1-208ENST00000488206 ARHGAP28Q9P2N2 729 aa17.28■□□□□ 0.36
TM2D1-208ENST00000488206 ZMYND8Q9ULU4 1186 aaPredicted RBP17.28■□□□□ 0.36
TM2D1-208ENST00000488206 ADGRA3Q8IWK6 1321 aa17.27■□□□□ 0.36
TM2D1-208ENST00000488206 RPS6KA5O75582 802 aa17.27■□□□□ 0.36
TM2D1-208ENST00000488206 PFKMP08237 780 aa17.27■□□□□ 0.36
TM2D1-208ENST00000488206 GHRP10912 638 aa17.27■□□□□ 0.36
TM2D1-208ENST00000488206 ITGB8P26012 769 aa17.27■□□□□ 0.36
TM2D1-208ENST00000488206 MBTD1Q05BQ5 628 aa17.27■□□□□ 0.36
TM2D1-208ENST00000488206 PAK2Q13177 524 aa17.27■□□□□ 0.36
TM2D1-208ENST00000488206 ALCAMQ13740 583 aa17.27■□□□□ 0.36
TM2D1-208ENST00000488206 LPIN1Q14693 890 aa17.27■□□□□ 0.36
TM2D1-208ENST00000488206 FAM26FQ5R3K3 315 aa17.27■□□□□ 0.36
TM2D1-208ENST00000488206 TMEM40Q8WWA1 233 aa17.27■□□□□ 0.36
TM2D1-208ENST00000488206 KCNN1Q92952 543 aa17.27■□□□□ 0.36
TM2D1-208ENST00000488206 SMARCE1Q969G3 411 aa17.27■□□□□ 0.36
TM2D1-208ENST00000488206 SCLYQ96I15 445 aa17.27■□□□□ 0.36
TM2D1-208ENST00000488206 NTPCRQ9BSD7 190 aaKnown RBP17.27■□□□□ 0.36
TM2D1-208ENST00000488206 CDHR5Q9HBB8 845 aa17.27■□□□□ 0.36
TM2D1-208ENST00000488206 RMND1Q9NWS8 449 aa17.27■□□□□ 0.36
TM2D1-208ENST00000488206 INO80B-WBP1J3KQ70 363 aa17.26■□□□□ 0.35
TM2D1-208ENST00000488206 SLC16A4O15374 487 aa17.26■□□□□ 0.35
TM2D1-208ENST00000488206 KLRC4O43908 158 aa17.26■□□□□ 0.35
TM2D1-208ENST00000488206 CXCL10P02778 98 aa17.26■□□□□ 0.35
TM2D1-208ENST00000488206 SYN1P17600 705 aa17.26■□□□□ 0.35
TM2D1-208ENST00000488206 EHHADHQ08426 723 aa17.26■□□□□ 0.35
TM2D1-208ENST00000488206 PPIGQ13427 754 aaKnown RBP eCLIP17.26■□□□□ 0.355e-6■■□□□ 11.4
TM2D1-208ENST00000488206 KCNB1Q14721 858 aa17.26■□□□□ 0.35
TM2D1-208ENST00000488206 KMT5BQ4FZB7 885 aa17.26■□□□□ 0.35
TM2D1-208ENST00000488206 FAM43BQ6ZT52 329 aaPredicted RBP17.26■□□□□ 0.35
TM2D1-208ENST00000488206 STXBP4Q6ZWJ1 553 aa17.26■□□□□ 0.35
TM2D1-208ENST00000488206 FAM228AQ86W67 206 aa17.26■□□□□ 0.35
TM2D1-208ENST00000488206 TMEM161BQ8NDZ6 487 aa17.26■□□□□ 0.35
TM2D1-208ENST00000488206 HVCN1Q96D96 273 aa17.26■□□□□ 0.35
TM2D1-208ENST00000488206 LBHD1Q9BQE6 289 aaPredicted RBP17.26■□□□□ 0.35
TM2D1-208ENST00000488206 ST6GALNAC4Q9H4F1 302 aa17.26■□□□□ 0.35
TM2D1-208ENST00000488206 MRPL44Q9H9J2 332 aaKnown RBP17.26■□□□□ 0.35
TM2D1-208ENST00000488206 DENND3A2RUS2 1198 aa17.25■□□□□ 0.35
TM2D1-208ENST00000488206 GPR182O15218 404 aa17.25■□□□□ 0.35
TM2D1-208ENST00000488206 NBNO60934 754 aa17.25■□□□□ 0.35
TM2D1-208ENST00000488206 ERLIN2O94905 339 aa17.25■□□□□ 0.35
TM2D1-208ENST00000488206 FPGSQ05932 587 aa17.25■□□□□ 0.35
TM2D1-208ENST00000488206 CAMK4Q16566 473 aa17.25■□□□□ 0.35
TM2D1-208ENST00000488206 MAPK6Q16659 721 aa17.25■□□□□ 0.35
TM2D1-208ENST00000488206 KLHL40Q2TBA0 621 aa17.25■□□□□ 0.35
TM2D1-208ENST00000488206 PPP4R3CPQ6ZMV5 832 aa17.25■□□□□ 0.35
TM2D1-208ENST00000488206 CATSPER4Q7RTX7 472 aa17.25■□□□□ 0.35
TM2D1-208ENST00000488206 HAUS6Q7Z4H7 955 aa17.25■□□□□ 0.35
TM2D1-208ENST00000488206 APBB2Q92870 758 aa17.25■□□□□ 0.35
TM2D1-208ENST00000488206 BADQ92934 168 aa17.25■□□□□ 0.35
TM2D1-208ENST00000488206 SYAP1Q96A49 352 aaPredicted RBP17.25■□□□□ 0.35
TM2D1-208ENST00000488206 PRIMPOLQ96LW4 560 aa17.25■□□□□ 0.35
TM2D1-208ENST00000488206 GSDMAQ96QA5 445 aa17.25■□□□□ 0.35
TM2D1-208ENST00000488206 FIZ1Q96SL8 496 aa17.25■□□□□ 0.35
TM2D1-208ENST00000488206 IFIH1Q9BYX4 1025 aaKnown RBP17.25■□□□□ 0.35
TM2D1-208ENST00000488206 CCDC113Q9H0I3 377 aa17.25■□□□□ 0.35
TM2D1-208ENST00000488206 TMEM134Q9H6X4 195 aa17.25■□□□□ 0.35
TM2D1-208ENST00000488206 MINDY3Q9H8M7 445 aa17.25■□□□□ 0.35
TM2D1-208ENST00000488206 PRMT7Q9NVM4 692 aaPredicted RBP17.25■□□□□ 0.35
TM2D1-208ENST00000488206 NOC2LQ9Y3T9 749 aaKnown RBP17.25■□□□□ 0.35
TM2D1-208ENST00000488206 UBE4BO95155 1302 aa17.24■□□□□ 0.35
TM2D1-208ENST00000488206 RHOBTB3O94955 611 aa17.24■□□□□ 0.35
TM2D1-208ENST00000488206 GCNT3O95395 438 aa17.24■□□□□ 0.35
TM2D1-208ENST00000488206 PRKCBP05771 671 aa17.24■□□□□ 0.35
TM2D1-208ENST00000488206 CSF2RAP15509 400 aa17.24■□□□□ 0.35
TM2D1-208ENST00000488206 NMT1P30419 496 aaKnown RBP17.24■□□□□ 0.35
TM2D1-208ENST00000488206 CD52P31358 61 aa17.24■□□□□ 0.35
TM2D1-208ENST00000488206 STRN3Q13033 797 aa17.24■□□□□ 0.35
TM2D1-208ENST00000488206 PSMD2Q13200 908 aa17.24■□□□□ 0.35
TM2D1-208ENST00000488206 NFKBIBQ15653 356 aa17.24■□□□□ 0.35
TM2D1-208ENST00000488206 FAM187BQ17R55 369 aa17.24■□□□□ 0.35
TM2D1-208ENST00000488206 SKOR2Q2VWA4 1001 aaPredicted RBP17.24■□□□□ 0.35
TM2D1-208ENST00000488206 PLEKHG4Q58EX7 1191 aa17.24■□□□□ 0.35
TM2D1-208ENST00000488206 CCDC183Q5T5S1 534 aa17.24■□□□□ 0.35
TM2D1-208ENST00000488206 RPUSD2Q8IZ73 545 aaKnown RBP17.24■□□□□ 0.35
TM2D1-208ENST00000488206 SPATA20Q8TB22 786 aa17.24■□□□□ 0.35
TM2D1-208ENST00000488206 SEPT8Q92599 483 aa17.24■□□□□ 0.35
TM2D1-208ENST00000488206 GTPBP4Q9BZE4 634 aaKnown RBP17.24■□□□□ 0.35
TM2D1-208ENST00000488206 ERVK-5Q9HDB9 667 aa17.24■□□□□ 0.35
TM2D1-208ENST00000488206 IL23AQ9NPF7 189 aa17.24■□□□□ 0.35
TM2D1-208ENST00000488206 TBC1D7Q9P0N9 293 aa17.24■□□□□ 0.35
TM2D1-208ENST00000488206 PADI3Q9ULW8 664 aa17.24■□□□□ 0.35
TM2D1-208ENST00000488206 ST3GAL5Q9UNP4 418 aa17.24■□□□□ 0.35
TM2D1-208ENST00000488206 CNTNAP2Q9UHC6 1331 aa17.23■□□□□ 0.35
TM2D1-208ENST00000488206 SCN5AQ14524 2016 aa17.23■□□□□ 0.35
TM2D1-208ENST00000488206 K7ERI5 159 aa17.23■□□□□ 0.35
TM2D1-208ENST00000488206 EIF3DO15371 548 aaKnown RBP eCLIP17.23■□□□□ 0.35
TM2D1-208ENST00000488206 GTF2BQ00403 316 aa17.23■□□□□ 0.35
TM2D1-208ENST00000488206 GPNMBQ14956 572 aa17.23■□□□□ 0.35
TM2D1-208ENST00000488206 NT5DC1Q5TFE4 455 aa17.23■□□□□ 0.35
TM2D1-208ENST00000488206 CNKSR3Q6P9H4 555 aa17.23■□□□□ 0.35
TM2D1-208ENST00000488206 ZNF720Q7Z2F6 126 aa17.23■□□□□ 0.35
TM2D1-208ENST00000488206 DEFB128Q7Z7B8 93 aa17.23■□□□□ 0.35
TM2D1-208ENST00000488206 FZD8Q9H461 694 aa17.23■□□□□ 0.35
TM2D1-208ENST00000488206 AGO3Q9H9G7 860 aaKnown RBP17.23■□□□□ 0.35
TM2D1-208ENST00000488206 AGPAT5Q9NUQ2 364 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms