RNA–Protein interactions for RNA: ENST00000488146.5

DEPDC1-203, Transcript of DEP domain containing 1, humanhuman

TSL 2

Gene DEPDC1, Length 2,658 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-203ENST00000488146 DLL3Q9NYJ7 618 aa3.12□□□□□ -1.91
DEPDC1-203ENST00000488146 TLR7Q9NYK1 1049 aaKnown RBP3.12□□□□□ -1.91
DEPDC1-203ENST00000488146 ERAP1Q9NZ08 941 aa3.12□□□□□ -1.91
DEPDC1-203ENST00000488146 INPP5FQ9Y2H2 1132 aa3.12□□□□□ -1.91
DEPDC1-203ENST00000488146 PCDHB12Q9Y5F1 795 aa3.12□□□□□ -1.91
DEPDC1-203ENST00000488146 MRVI1Q9Y6F6 885 aa3.12□□□□□ -1.91
DEPDC1-203ENST00000488146 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.12□□□□□ -1.91
DEPDC1-203ENST00000488146 EPOPA6NHQ4 379 aa3.12□□□□□ -1.91
DEPDC1-203ENST00000488146 FIGNL2A6NMB9 653 aa3.12□□□□□ -1.91
DEPDC1-203ENST00000488146 GCOM1H8Y6P7 765 aaPredicted RBP3.12□□□□□ -1.91
DEPDC1-203ENST00000488146 M0QZ92 97 aa3.12□□□□□ -1.91
DEPDC1-203ENST00000488146 HBP1O60381 514 aa3.12□□□□□ -1.91
DEPDC1-203ENST00000488146 ZNF623O75123 536 aa3.12□□□□□ -1.91
DEPDC1-203ENST00000488146 TNFRSF21O75509 655 aa3.12□□□□□ -1.91
DEPDC1-203ENST00000488146 LGALS2P05162 132 aa3.12□□□□□ -1.91
DEPDC1-203ENST00000488146 HNRNPA1P09651 372 aaKnown RBP eCLIP3.12□□□□□ -1.91
DEPDC1-203ENST00000488146 POLR2MP0CAP2 368 aa3.12□□□□□ -1.91
DEPDC1-203ENST00000488146 SMIM10L2AP0DMW4 78 aa3.12□□□□□ -1.91
DEPDC1-203ENST00000488146 SMIM10L2BP0DMW5 78 aa3.12□□□□□ -1.91
DEPDC1-203ENST00000488146 CYP2D6P10635 497 aa3.12□□□□□ -1.91
DEPDC1-203ENST00000488146 ACPPP15309 386 aa3.12□□□□□ -1.91
DEPDC1-203ENST00000488146 AOC1P19801 751 aa3.12□□□□□ -1.91
DEPDC1-203ENST00000488146 MUTP22033 750 aa3.12□□□□□ -1.91
DEPDC1-203ENST00000488146 AVPR2P30518 371 aa3.12□□□□□ -1.91
DEPDC1-203ENST00000488146 KIF5BP33176 963 aa3.12□□□□□ -1.91
DEPDC1-203ENST00000488146 LTBRP36941 435 aa3.12□□□□□ -1.91
DEPDC1-203ENST00000488146 CRYBB1P53674 252 aaPredicted RBP3.12□□□□□ -1.91
DEPDC1-203ENST00000488146 RPS6P62753 249 aaKnown RBP3.12□□□□□ -1.91
DEPDC1-203ENST00000488146 POU5F1Q01860 360 aaKnown RBP3.12□□□□□ -1.91
DEPDC1-203ENST00000488146 NR5A1Q13285 461 aa3.12□□□□□ -1.91
DEPDC1-203ENST00000488146 HNRNPDQ14103 355 aaKnown RBP3.12□□□□□ -1.91
DEPDC1-203ENST00000488146 ARSJQ5FYB0 599 aaPredicted RBP3.12□□□□□ -1.91
DEPDC1-203ENST00000488146 TCEAL5Q5H9L2 206 aa3.12□□□□□ -1.91
DEPDC1-203ENST00000488146 MUM1L1Q5H9M0 696 aa3.12□□□□□ -1.91
DEPDC1-203ENST00000488146 ALKBH2Q6NS38 261 aa3.12□□□□□ -1.91
DEPDC1-203ENST00000488146 RUFY4Q6ZNE9 571 aa3.12□□□□□ -1.91
DEPDC1-203ENST00000488146 OTOP3Q7RTS5 596 aa3.12□□□□□ -1.91
DEPDC1-203ENST00000488146 RNF168Q8IYW5 571 aaPredicted RBP3.12□□□□□ -1.91
DEPDC1-203ENST00000488146 SPPL3Q8TCT6 385 aa3.12□□□□□ -1.91
DEPDC1-203ENST00000488146 UBXN4Q92575 508 aa3.12□□□□□ -1.91
DEPDC1-203ENST00000488146 STAMQ92783 540 aa3.12□□□□□ -1.91
DEPDC1-203ENST00000488146 GLG1Q92896 1179 aa3.12□□□□□ -1.91
DEPDC1-203ENST00000488146 OSBP2Q969R2 916 aa3.12□□□□□ -1.91
DEPDC1-203ENST00000488146 FERMT2Q96AC1 680 aa3.12□□□□□ -1.91
DEPDC1-203ENST00000488146 KIFC2Q96AC6 838 aa3.12□□□□□ -1.91
DEPDC1-203ENST00000488146 TMEM47Q9BQJ4 181 aa3.12□□□□□ -1.91
DEPDC1-203ENST00000488146 NFKBIZQ9BYH8 718 aa3.12□□□□□ -1.91
DEPDC1-203ENST00000488146 ANTXR1Q9H6X2 564 aa3.12□□□□□ -1.91
DEPDC1-203ENST00000488146 RXFP1Q9HBX9 757 aa3.12□□□□□ -1.91
DEPDC1-203ENST00000488146 POLMQ9NP87 494 aaPredicted RBP3.12□□□□□ -1.91
DEPDC1-203ENST00000488146 IL17RBQ9NRM6 502 aa3.12□□□□□ -1.91
DEPDC1-203ENST00000488146 FBXO28Q9NVF7 368 aa3.12□□□□□ -1.91
DEPDC1-203ENST00000488146 RBM28Q9NW13 759 aaKnown RBP3.12□□□□□ -1.91
DEPDC1-203ENST00000488146 PGPEP1Q9NXJ5 209 aa3.12□□□□□ -1.91
DEPDC1-203ENST00000488146 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.12□□□□□ -1.91
DEPDC1-203ENST00000488146 HSFX1Q9UBD0 423 aa3.12□□□□□ -1.91
DEPDC1-203ENST00000488146 PLAGL2Q9UPG8 496 aa3.12□□□□□ -1.91
DEPDC1-203ENST00000488146 TTC3P53804 2025 aa3.12□□□□□ -1.91
DEPDC1-203ENST00000488146 LOC101059915A0A1B0GWI6 518 aaPredicted RBP3.11□□□□□ -1.91
DEPDC1-203ENST00000488146 TSPY2A6NKD2 308 aa3.11□□□□□ -1.91
DEPDC1-203ENST00000488146 ANHXE9PGG2 379 aa3.11□□□□□ -1.91
DEPDC1-203ENST00000488146 EREGO14944 169 aa3.11□□□□□ -1.91
DEPDC1-203ENST00000488146 FGF19O95750 216 aa3.11□□□□□ -1.91
DEPDC1-203ENST00000488146 PARP1P09874 1014 aaKnown RBP3.11□□□□□ -1.91
DEPDC1-203ENST00000488146 ALAS1P13196 640 aa3.11□□□□□ -1.91
DEPDC1-203ENST00000488146 TIMP2P16035 220 aa3.11□□□□□ -1.91
DEPDC1-203ENST00000488146 PFKLP17858 780 aa3.11□□□□□ -1.91
DEPDC1-203ENST00000488146 CDK11BP21127 795 aaKnown RBP3.11□□□□□ -1.91
DEPDC1-203ENST00000488146 CIITAP33076 1130 aa3.11□□□□□ -1.91
DEPDC1-203ENST00000488146 NRLP54845 237 aa3.11□□□□□ -1.91
DEPDC1-203ENST00000488146 STARD6P59095 220 aa3.11□□□□□ -1.91
DEPDC1-203ENST00000488146 PGM5Q15124 567 aa3.11□□□□□ -1.91
DEPDC1-203ENST00000488146 GALNT17Q6IS24 598 aa3.11□□□□□ -1.91
DEPDC1-203ENST00000488146 ZNF746Q6NUN9 644 aaPredicted RBP3.11□□□□□ -1.91
DEPDC1-203ENST00000488146 MTSS1LQ765P7 747 aa3.11□□□□□ -1.91
DEPDC1-203ENST00000488146 RAB44Q7Z6P3 723 aaPredicted RBP3.11□□□□□ -1.91
DEPDC1-203ENST00000488146 MRPL10Q7Z7H8 261 aaKnown RBP3.11□□□□□ -1.91
DEPDC1-203ENST00000488146 DDX53Q86TM3 631 aaKnown RBP3.11□□□□□ -1.91
DEPDC1-203ENST00000488146 FBXO16Q8IX29 292 aaPredicted RBP3.11□□□□□ -1.91
DEPDC1-203ENST00000488146 COLGALT1Q8NBJ5 622 aa3.11□□□□□ -1.91
DEPDC1-203ENST00000488146 LSM14AQ8ND56 463 aaKnown RBP3.11□□□□□ -1.91
DEPDC1-203ENST00000488146 SDR42E1Q8WUS8 393 aa3.11□□□□□ -1.91
DEPDC1-203ENST00000488146 SEPT1Q8WYJ6 367 aa3.11□□□□□ -1.91
DEPDC1-203ENST00000488146 HPS1Q92902 700 aa3.11□□□□□ -1.91
DEPDC1-203ENST00000488146 CUL5Q93034 780 aa3.11□□□□□ -1.91
DEPDC1-203ENST00000488146 DYNLL2Q96FJ2 89 aa3.11□□□□□ -1.91
DEPDC1-203ENST00000488146 MYO19Q96H55 970 aa3.11□□□□□ -1.91
DEPDC1-203ENST00000488146 TMEM87BQ96K49 555 aa3.11□□□□□ -1.91
DEPDC1-203ENST00000488146 CEP295NLQ96MC4 621 aa3.11□□□□□ -1.91
DEPDC1-203ENST00000488146 KLF16Q9BXK1 252 aaPredicted RBP3.11□□□□□ -1.91
DEPDC1-203ENST00000488146 NIFKQ9BYG3 293 aaKnown RBP3.11□□□□□ -1.91
DEPDC1-203ENST00000488146 INO80BQ9C086 356 aaPredicted RBP3.11□□□□□ -1.91
DEPDC1-203ENST00000488146 FTOQ9C0B1 505 aaKnown RBP eCLIP3.11□□□□□ -1.91
DEPDC1-203ENST00000488146 PUS7LQ9H0K6 701 aaKnown RBP3.11□□□□□ -1.91
DEPDC1-203ENST00000488146 EPC1Q9H2F5 836 aa3.11□□□□□ -1.91
DEPDC1-203ENST00000488146 NEUROD4Q9HD90 331 aa3.11□□□□□ -1.91
DEPDC1-203ENST00000488146 ATP13A2Q9NQ11 1180 aa3.11□□□□□ -1.91
DEPDC1-203ENST00000488146 JADE2Q9NQC1 790 aa3.11□□□□□ -1.91
DEPDC1-203ENST00000488146 OBP2AQ9NY56 170 aa3.11□□□□□ -1.91
DEPDC1-203ENST00000488146 PUF60Q9UHX1 559 aaKnown RBP3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms