RNA–Protein interactions for RNA: ENST00000487633.1

COL4A3-206, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 3

Gene COL4A3, Length 524 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-206ENST00000487633 ANP32CO43423 234 aa6.73□□□□□ -1.33
COL4A3-206ENST00000487633 HYAL3O43820 417 aaPredicted RBP6.73□□□□□ -1.33
COL4A3-206ENST00000487633 LRP3O75074 770 aa6.73□□□□□ -1.33
COL4A3-206ENST00000487633 RAB11FIP3O75154 756 aa6.73□□□□□ -1.33
COL4A3-206ENST00000487633 POLR2MP0CAP2 368 aa6.73□□□□□ -1.33
COL4A3-206ENST00000487633 NOVA1P51513 510 aaKnown RBP6.73□□□□□ -1.33
COL4A3-206ENST00000487633 ZBTB41Q5SVQ8 909 aa6.73□□□□□ -1.33
COL4A3-206ENST00000487633 PALB2Q86YC2 1186 aa6.73□□□□□ -1.33
COL4A3-206ENST00000487633 CELF5Q8N6W0 485 aaKnown RBP6.73□□□□□ -1.33
COL4A3-206ENST00000487633 PI4K2BQ8TCG2 481 aa6.73□□□□□ -1.33
COL4A3-206ENST00000487633 PIBF1Q8WXW3 757 aa6.73□□□□□ -1.33
COL4A3-206ENST00000487633 FAM227BQ96M60 508 aa6.73□□□□□ -1.33
COL4A3-206ENST00000487633 TTC14Q96N46 770 aa6.73□□□□□ -1.33
COL4A3-206ENST00000487633 SENP7Q9BQF6 1050 aa6.73□□□□□ -1.33
COL4A3-206ENST00000487633 OSBPL6Q9BZF3 934 aa6.73□□□□□ -1.33
COL4A3-206ENST00000487633 MAF1Q9H063 256 aa6.73□□□□□ -1.33
COL4A3-206ENST00000487633 GBP3Q9H0R5 595 aa6.73□□□□□ -1.33
COL4A3-206ENST00000487633 SMARCAD1Q9H4L7 1026 aa6.73□□□□□ -1.33
COL4A3-206ENST00000487633 RBM12Q9NTZ6 932 aaKnown RBP6.73□□□□□ -1.33
COL4A3-206ENST00000487633 POLR3BQ9NW08 1133 aaPredicted RBP6.73□□□□□ -1.33
COL4A3-206ENST00000487633 MARCH5Q9NX47 278 aa6.73□□□□□ -1.33
COL4A3-206ENST00000487633 CACNA2D2Q9NY47 1150 aa6.73□□□□□ -1.33
COL4A3-206ENST00000487633 MAD2L2Q9UI95 211 aa6.73□□□□□ -1.33
COL4A3-206ENST00000487633 VWA8A3KMH1 1905 aa6.73□□□□□ -1.33
COL4A3-206ENST00000487633 TDRD15B5MCY1 1934 aaKnown RBP6.73□□□□□ -1.33
COL4A3-206ENST00000487633 NCANO14594 1321 aa6.73□□□□□ -1.33
COL4A3-206ENST00000487633 ABCA7Q8IZY2 2146 aa6.73□□□□□ -1.33
COL4A3-206ENST00000487633 A0A0D9SFI3 127 aa6.72□□□□□ -1.33
COL4A3-206ENST00000487633 RRN3P2A6NIE6 340 aa6.72□□□□□ -1.33
COL4A3-206ENST00000487633 MEIS2O14770 477 aa6.72□□□□□ -1.33
COL4A3-206ENST00000487633 ZBTB5O15062 677 aa6.72□□□□□ -1.33
COL4A3-206ENST00000487633 PAPLNO95428 1278 aa6.72□□□□□ -1.33
COL4A3-206ENST00000487633 EFEMP2O95967 443 aa6.72□□□□□ -1.33
COL4A3-206ENST00000487633 ZFYP08048 801 aaPredicted RBP6.72□□□□□ -1.33
COL4A3-206ENST00000487633 RPL17P18621 184 aaKnown RBP6.72□□□□□ -1.33
COL4A3-206ENST00000487633 RPS9P46781 194 aaKnown RBP6.72□□□□□ -1.33
COL4A3-206ENST00000487633 PXNP49023 591 aaPredicted RBP6.72□□□□□ -1.33
COL4A3-206ENST00000487633 ALDH7A1P49419 539 aaKnown RBP6.72□□□□□ -1.33
COL4A3-206ENST00000487633 PRKCQQ04759 706 aa6.72□□□□□ -1.33
COL4A3-206ENST00000487633 GNPTABQ3T906 1256 aa6.72□□□□□ -1.33
COL4A3-206ENST00000487633 Q6ZS52 159 aa6.72□□□□□ -1.33
COL4A3-206ENST00000487633 TRMT1LQ7Z2T5 733 aaKnown RBP6.72□□□□□ -1.33
COL4A3-206ENST00000487633 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.72□□□□□ -1.33
COL4A3-206ENST00000487633 GRASPQ7Z6J2 395 aaPredicted RBP6.72□□□□□ -1.33
COL4A3-206ENST00000487633 FTSJ3Q8IY81 847 aaKnown RBP6.72□□□□□ -1.33
COL4A3-206ENST00000487633 ENAHQ8N8S7 591 aaPredicted RBP6.72□□□□□ -1.33
COL4A3-206ENST00000487633 FGF13Q92913 245 aa6.72□□□□□ -1.33
COL4A3-206ENST00000487633 CHRDQ9H2X0 955 aa6.72□□□□□ -1.33
COL4A3-206ENST00000487633 ADAMTS10Q9H324 1103 aa6.72□□□□□ -1.33
COL4A3-206ENST00000487633 HCFC1R1Q9NWW0 138 aa6.72□□□□□ -1.33
COL4A3-206ENST00000487633 INPP5FQ9Y2H2 1132 aa6.72□□□□□ -1.33
COL4A3-206ENST00000487633 ZNF316A6NFI3 1004 aaPredicted RBP6.71□□□□□ -1.34
COL4A3-206ENST00000487633 C4orf47A7E2U8 309 aa6.71□□□□□ -1.34
COL4A3-206ENST00000487633 TRIM6-TRIM34B2RNG4 842 aa6.71□□□□□ -1.34
COL4A3-206ENST00000487633 KLRF2D3W0D1 207 aa6.71□□□□□ -1.34
COL4A3-206ENST00000487633 PYCARD-AS1I3L0S3 204 aa6.71□□□□□ -1.34
COL4A3-206ENST00000487633 GPR182O15218 404 aa6.71□□□□□ -1.34
COL4A3-206ENST00000487633 TGM5O43548 720 aa6.71□□□□□ -1.34
COL4A3-206ENST00000487633 OFD1O75665 1012 aa6.71□□□□□ -1.34
COL4A3-206ENST00000487633 C22orf31O95567 290 aa6.71□□□□□ -1.34
COL4A3-206ENST00000487633 CCNE2O96020 404 aa6.71□□□□□ -1.34
COL4A3-206ENST00000487633 PARP1P09874 1014 aaKnown RBP6.71□□□□□ -1.34
COL4A3-206ENST00000487633 ZNF806P0C7X5 589 aa6.71□□□□□ -1.34
COL4A3-206ENST00000487633 CLCN3P51790 818 aa6.71□□□□□ -1.34
COL4A3-206ENST00000487633 CRYBB1P53674 252 aaPredicted RBP6.71□□□□□ -1.34
COL4A3-206ENST00000487633 POLGP54098 1239 aaPredicted RBP6.71□□□□□ -1.34
COL4A3-206ENST00000487633 AK2P54819 239 aa6.71□□□□□ -1.34
COL4A3-206ENST00000487633 ITGB3BPQ13352 177 aaPredicted RBP6.71□□□□□ -1.34
COL4A3-206ENST00000487633 NONOQ15233 471 aaKnown RBP eCLIP6.71□□□□□ -1.34
COL4A3-206ENST00000487633 ALX1Q15699 326 aa6.71□□□□□ -1.34
COL4A3-206ENST00000487633 ASPRV1Q53RT3 343 aa6.71□□□□□ -1.34
COL4A3-206ENST00000487633 PLA2G2CQ5R387 149 aa6.71□□□□□ -1.34
COL4A3-206ENST00000487633 SH3PXD2AQ5TCZ1 1133 aa6.71□□□□□ -1.34
COL4A3-206ENST00000487633 PCNX4Q63HM2 1172 aa6.71□□□□□ -1.34
COL4A3-206ENST00000487633 PKN3Q6P5Z2 889 aa6.71□□□□□ -1.34
COL4A3-206ENST00000487633 KBTBD6Q86V97 674 aa6.71□□□□□ -1.34
COL4A3-206ENST00000487633 DGKHQ86XP1 1220 aa6.71□□□□□ -1.34
COL4A3-206ENST00000487633 CCDC60Q8IWA6 550 aaPredicted RBP6.71□□□□□ -1.34
COL4A3-206ENST00000487633 RNF168Q8IYW5 571 aaPredicted RBP6.71□□□□□ -1.34
COL4A3-206ENST00000487633 ABI1Q8IZP0 508 aa6.71□□□□□ -1.34
COL4A3-206ENST00000487633 NME8Q8N427 588 aa6.71□□□□□ -1.34
COL4A3-206ENST00000487633 TMEM87AQ8NBN3 555 aa6.71□□□□□ -1.34
COL4A3-206ENST00000487633 ING5Q8WYH8 240 aa6.71□□□□□ -1.34
COL4A3-206ENST00000487633 DDX1Q92499 740 aaKnown RBP6.71□□□□□ -1.34
COL4A3-206ENST00000487633 NXPE3Q969Y0 559 aa6.71□□□□□ -1.34
COL4A3-206ENST00000487633 BORCS6Q96GS4 357 aa6.71□□□□□ -1.34
COL4A3-206ENST00000487633 SHDQ96IW2 340 aa6.71□□□□□ -1.34
COL4A3-206ENST00000487633 LRRCC1Q9C099 1032 aa6.71□□□□□ -1.34
COL4A3-206ENST00000487633 LMAN1LQ9HAT1 526 aa6.71□□□□□ -1.34
COL4A3-206ENST00000487633 ZBTB40Q9NUA8 1239 aa6.71□□□□□ -1.34
COL4A3-206ENST00000487633 CACNG4Q9UBN1 327 aa6.71□□□□□ -1.34
COL4A3-206ENST00000487633 RAB23Q9ULC3 237 aa6.71□□□□□ -1.34
COL4A3-206ENST00000487633 UBIAD1Q9Y5Z9 338 aa6.71□□□□□ -1.34
COL4A3-206ENST00000487633 NBPF19A0A087WUL8 3843 aa6.7□□□□□ -1.34
COL4A3-206ENST00000487633 A0A0U1RQF3 1178 aa6.7□□□□□ -1.34
COL4A3-206ENST00000487633 PALM3A6NDB9 673 aaPredicted RBP6.7□□□□□ -1.34
COL4A3-206ENST00000487633 CHRNB1P11230 501 aa6.7□□□□□ -1.34
COL4A3-206ENST00000487633 FSHRP23945 695 aa6.7□□□□□ -1.34
COL4A3-206ENST00000487633 STAT5BP51692 787 aa6.7□□□□□ -1.34
COL4A3-206ENST00000487633 NLRP11P59045 1033 aaKnown RBP6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms