RNA–Protein interactions for RNA: ENST00000487447.1

CLIP2-207, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 4

Gene CLIP2, Length 564 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-207ENST00000487447 E2F4Q16254 413 aa12.91□□□□□ -0.34
CLIP2-207ENST00000487447 FAM187BQ17R55 369 aa12.91□□□□□ -0.34
CLIP2-207ENST00000487447 FAM102BQ5T8I3 360 aa12.91□□□□□ -0.34
CLIP2-207ENST00000487447 CCDC73Q6ZRK6 1079 aa12.91□□□□□ -0.34
CLIP2-207ENST00000487447 SLC24A5Q71RS6 500 aa12.91□□□□□ -0.34
CLIP2-207ENST00000487447 CHAMP1Q96JM3 812 aa12.91□□□□□ -0.34
CLIP2-207ENST00000487447 DRC1Q96MC2 740 aa12.91□□□□□ -0.34
CLIP2-207ENST00000487447 SCLT1Q96NL6 688 aa12.91□□□□□ -0.34
CLIP2-207ENST00000487447 PLIN2Q99541 437 aa12.91□□□□□ -0.34
CLIP2-207ENST00000487447 NTPCRQ9BSD7 190 aaKnown RBP12.91□□□□□ -0.34
CLIP2-207ENST00000487447 SCAND2PQ9GZW5 306 aaPredicted RBP12.91□□□□□ -0.34
CLIP2-207ENST00000487447 CCDC113Q9H0I3 377 aa12.91□□□□□ -0.34
CLIP2-207ENST00000487447 ODF2LQ9ULJ1 636 aa12.91□□□□□ -0.34
CLIP2-207ENST00000487447 ADGRA3Q8IWK6 1321 aa12.9□□□□□ -0.34
CLIP2-207ENST00000487447 HIP1RO75146 1068 aa12.9□□□□□ -0.34
CLIP2-207ENST00000487447 DNAJB2P25686 324 aa12.9□□□□□ -0.34
CLIP2-207ENST00000487447 HOXA11P31270 313 aaPredicted RBP12.9□□□□□ -0.34
CLIP2-207ENST00000487447 PBX2P40425 430 aa12.9□□□□□ -0.34
CLIP2-207ENST00000487447 ME1P48163 572 aa12.9□□□□□ -0.34
CLIP2-207ENST00000487447 SARSP49591 514 aaKnown RBP12.9□□□□□ -0.34
CLIP2-207ENST00000487447 MCM6Q14566 821 aa12.9□□□□□ -0.34
CLIP2-207ENST00000487447 RRAGBQ5VZM2 374 aa12.9□□□□□ -0.34
CLIP2-207ENST00000487447 ADALQ6DHV7 355 aa12.9□□□□□ -0.34
CLIP2-207ENST00000487447 MAEAQ7L5Y9 396 aa12.9□□□□□ -0.34
CLIP2-207ENST00000487447 NPAS4Q8IUM7 802 aa12.9□□□□□ -0.34
CLIP2-207ENST00000487447 SPIRE2Q8WWL2 714 aa12.9□□□□□ -0.34
CLIP2-207ENST00000487447 SPATA32Q96LK8 384 aa12.9□□□□□ -0.34
CLIP2-207ENST00000487447 PRIMPOLQ96LW4 560 aa12.9□□□□□ -0.34
CLIP2-207ENST00000487447 ADAM2Q99965 735 aa12.9□□□□□ -0.34
CLIP2-207ENST00000487447 C2orf40Q9H1Z8 148 aa12.9□□□□□ -0.34
CLIP2-207ENST00000487447 FZD8Q9H461 694 aa12.9□□□□□ -0.34
CLIP2-207ENST00000487447 CUEDC2Q9H467 287 aa12.9□□□□□ -0.34
CLIP2-207ENST00000487447 ELAC1Q9H777 363 aaKnown RBP12.9□□□□□ -0.34
CLIP2-207ENST00000487447 ARHGAP28Q9P2N2 729 aa12.9□□□□□ -0.34
CLIP2-207ENST00000487447 YBX2Q9Y2T7 364 aaKnown RBP12.9□□□□□ -0.34
CLIP2-207ENST00000487447 NLRC5Q86WI3 1866 aa12.9□□□□□ -0.34
CLIP2-207ENST00000487447 COL4A4P53420 1690 aaPredicted RBP12.89□□□□□ -0.35
CLIP2-207ENST00000487447 TSPAN1O60635 241 aa12.89□□□□□ -0.35
CLIP2-207ENST00000487447 CSDE1O75534 798 aaKnown RBP12.89□□□□□ -0.35
CLIP2-207ENST00000487447 FGFR4P22455 802 aa12.89□□□□□ -0.35
CLIP2-207ENST00000487447 AXLP30530 894 aa12.89□□□□□ -0.35
CLIP2-207ENST00000487447 CATSPER4Q7RTX7 472 aa12.89□□□□□ -0.35
CLIP2-207ENST00000487447 ZNF598Q86UK7 904 aaKnown RBP12.89□□□□□ -0.35
CLIP2-207ENST00000487447 MYOCDQ8IZQ8 938 aa12.89□□□□□ -0.35
CLIP2-207ENST00000487447 RASSF8Q8NHQ8 419 aa12.89□□□□□ -0.35
CLIP2-207ENST00000487447 ZNF689Q96CS4 500 aaPredicted RBP12.89□□□□□ -0.35
CLIP2-207ENST00000487447 CCDC51Q96ER9 411 aa12.89□□□□□ -0.35
CLIP2-207ENST00000487447 RAD9AQ99638 391 aa12.89□□□□□ -0.35
CLIP2-207ENST00000487447 REEP2Q9BRK0 252 aa12.89□□□□□ -0.35
CLIP2-207ENST00000487447 TNMDQ9H2S6 317 aa12.89□□□□□ -0.35
CLIP2-207ENST00000487447 PRMT7Q9NVM4 692 aaPredicted RBP12.89□□□□□ -0.35
CLIP2-207ENST00000487447 KBTBD4Q9NVX7 518 aa12.89□□□□□ -0.35
CLIP2-207ENST00000487447 RNF216Q9NWF9 866 aaPredicted RBP12.89□□□□□ -0.35
CLIP2-207ENST00000487447 TMEM161AQ9NX61 479 aa12.89□□□□□ -0.35
CLIP2-207ENST00000487447 KCNG1Q9UIX4 513 aa12.89□□□□□ -0.35
CLIP2-207ENST00000487447 HPSEQ9Y251 543 aa12.89□□□□□ -0.35
CLIP2-207ENST00000487447 PHLPP2Q6ZVD8 1323 aa12.88□□□□□ -0.35
CLIP2-207ENST00000487447 CNTNAP2Q9UHC6 1331 aa12.88□□□□□ -0.35
CLIP2-207ENST00000487447 A0A0U1RQF3 1178 aa12.88□□□□□ -0.35
CLIP2-207ENST00000487447 A0A1W2PQ27 194 aa12.88□□□□□ -0.35
CLIP2-207ENST00000487447 A0A1W2PQ64 194 aa12.88□□□□□ -0.35
CLIP2-207ENST00000487447 A0A1W2PQD8 194 aa12.88□□□□□ -0.35
CLIP2-207ENST00000487447 DENND3A2RUS2 1198 aa12.88□□□□□ -0.35
CLIP2-207ENST00000487447 LRRIQ4A6NIV6 560 aa12.88□□□□□ -0.35
CLIP2-207ENST00000487447 ZNF623O75123 536 aa12.88□□□□□ -0.35
CLIP2-207ENST00000487447 DGKIO75912 1065 aa12.88□□□□□ -0.35
CLIP2-207ENST00000487447 PLS3P13797 630 aa12.88□□□□□ -0.35
CLIP2-207ENST00000487447 ATF7P17544 494 aaPredicted RBP12.88□□□□□ -0.35
CLIP2-207ENST00000487447 SCP2P22307 547 aa12.88□□□□□ -0.35
CLIP2-207ENST00000487447 CMA1P23946 247 aa12.88□□□□□ -0.35
CLIP2-207ENST00000487447 STAT6P42226 847 aa12.88□□□□□ -0.35
CLIP2-207ENST00000487447 NPTX2P47972 431 aa12.88□□□□□ -0.35
CLIP2-207ENST00000487447 EFNA5P52803 228 aa12.88□□□□□ -0.35
CLIP2-207ENST00000487447 RABGGTBP53611 331 aa12.88□□□□□ -0.35
CLIP2-207ENST00000487447 NCKAP1LP55160 1127 aa12.88□□□□□ -0.35
CLIP2-207ENST00000487447 GIT2Q14161 759 aa12.88□□□□□ -0.35
CLIP2-207ENST00000487447 UBXN11Q5T124 520 aa12.88□□□□□ -0.35
CLIP2-207ENST00000487447 CNNM4Q6P4Q7 775 aa12.88□□□□□ -0.35
CLIP2-207ENST00000487447 TMCO2Q7Z6W1 182 aaPredicted RBP12.88□□□□□ -0.35
CLIP2-207ENST00000487447 GPBP1Q86WP2 473 aa12.88□□□□□ -0.35
CLIP2-207ENST00000487447 ZBTB8OSQ8IWT0 167 aa12.88□□□□□ -0.35
CLIP2-207ENST00000487447 TIFAQ96CG3 184 aa12.88□□□□□ -0.35
CLIP2-207ENST00000487447 DNAJC19Q96DA6 116 aa12.88□□□□□ -0.35
CLIP2-207ENST00000487447 IFT74Q96LB3 600 aa12.88□□□□□ -0.35
CLIP2-207ENST00000487447 PYM1Q9BRP8 204 aaKnown RBP12.88□□□□□ -0.35
CLIP2-207ENST00000487447 ZNF576Q9H609 170 aa12.88□□□□□ -0.35
CLIP2-207ENST00000487447 TMEM134Q9H6X4 195 aa12.88□□□□□ -0.35
CLIP2-207ENST00000487447 MAGEF1Q9HAY2 307 aa12.88□□□□□ -0.35
CLIP2-207ENST00000487447 TSHZ2Q9NRE2 1034 aa12.88□□□□□ -0.35
CLIP2-207ENST00000487447 DACT1Q9NYF0 836 aa12.88□□□□□ -0.35
CLIP2-207ENST00000487447 CHMP5Q9NZZ3 219 aa12.88□□□□□ -0.35
CLIP2-207ENST00000487447 INSL6Q9Y581 213 aa12.88□□□□□ -0.35
CLIP2-207ENST00000487447 CDH23Q9H251 3354 aa12.87□□□□□ -0.35
CLIP2-207ENST00000487447 UNC80Q8N2C7 3258 aa12.87□□□□□ -0.35
CLIP2-207ENST00000487447 FRMD3A2A2Y4 597 aa12.87□□□□□ -0.35
CLIP2-207ENST00000487447 MYMKA6NI61 221 aa12.87□□□□□ -0.35
CLIP2-207ENST00000487447 INO80B-WBP1J3KQ70 363 aa12.87□□□□□ -0.35
CLIP2-207ENST00000487447 TLL1O43897 1013 aa12.87□□□□□ -0.35
CLIP2-207ENST00000487447 EDN1P05305 212 aa12.87□□□□□ -0.35
CLIP2-207ENST00000487447 SSBP05455 408 aaKnown RBP eCLIP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms