RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 CEP104O60308 925 aa28.33■■■□□ 2.13
HLA-C-208ENST00000487245 SFNP31947 248 aa28.33■■■□□ 2.13
HLA-C-208ENST00000487245 MYL7Q01449 175 aa28.33■■■□□ 2.13
HLA-C-208ENST00000487245 PGM5Q15124 567 aa28.33■■■□□ 2.13
HLA-C-208ENST00000487245 INTS8Q75QN2 995 aaKnown RBP28.33■■■□□ 2.13
HLA-C-208ENST00000487245 PEX26Q7Z412 305 aa28.33■■■□□ 2.13
HLA-C-208ENST00000487245 TAAR1Q96RJ0 339 aa28.33■■■□□ 2.13
HLA-C-208ENST00000487245 TTC7AQ9ULT0 858 aaPredicted RBP28.33■■■□□ 2.13
HLA-C-208ENST00000487245 ESYT3A0FGR9 886 aa28.32■■■□□ 2.12
HLA-C-208ENST00000487245 P4HA2O15460 535 aa28.32■■■□□ 2.12
HLA-C-208ENST00000487245 EVI5O60447 810 aa28.32■■■□□ 2.12
HLA-C-208ENST00000487245 TMEM253P0C7T8 217 aa28.32■■■□□ 2.12
HLA-C-208ENST00000487245 RPS6P62753 249 aaKnown RBP28.32■■■□□ 2.12
HLA-C-208ENST00000487245 GJB7Q6PEY0 223 aa28.32■■■□□ 2.12
HLA-C-208ENST00000487245 NT5DC3Q86UY8 548 aa28.32■■■□□ 2.12
HLA-C-208ENST00000487245 LNX1Q8TBB1 728 aaPredicted RBP28.32■■■□□ 2.12
HLA-C-208ENST00000487245 TCEAL9Q9UHQ7 104 aa28.32■■■□□ 2.12
HLA-C-208ENST00000487245 MAPK13O15264 365 aa28.32■■■□□ 2.12
HLA-C-208ENST00000487245 VCAM1P19320 739 aa28.32■■■□□ 2.12
HLA-C-208ENST00000487245 CETN1Q12798 172 aa28.32■■■□□ 2.12
HLA-C-208ENST00000487245 DRAP1Q14919 205 aaPredicted RBP28.32■■■□□ 2.12
HLA-C-208ENST00000487245 LRIG3Q6UXM1 1119 aa28.32■■■□□ 2.12
HLA-C-208ENST00000487245 RDM1Q8NG50 284 aa28.32■■■□□ 2.12
HLA-C-208ENST00000487245 U2AF1L4Q8WU68 220 aaKnown RBP28.32■■■□□ 2.12
HLA-C-208ENST00000487245 HES6Q96HZ4 224 aa28.32■■■□□ 2.12
HLA-C-208ENST00000487245 RASSF4Q9H2L5 321 aa28.32■■■□□ 2.12
HLA-C-208ENST00000487245 APEX2Q9UBZ4 518 aa28.32■■■□□ 2.12
HLA-C-208ENST00000487245 DIS3Q9Y2L1 958 aaKnown RBP28.32■■■□□ 2.12
HLA-C-208ENST00000487245 FER1L6Q2WGJ9 1857 aa28.31■■■□□ 2.12
HLA-C-208ENST00000487245 ZNF233A6NK53 670 aa28.31■■■□□ 2.12
HLA-C-208ENST00000487245 PSMC5P62195 406 aa28.31■■■□□ 2.12
HLA-C-208ENST00000487245 KRT76Q01546 638 aa28.31■■■□□ 2.12
HLA-C-208ENST00000487245 DNAJC21Q5F1R6 531 aaKnown RBP28.31■■■□□ 2.12
HLA-C-208ENST00000487245 DCAF15Q66K64 600 aa28.31■■■□□ 2.12
HLA-C-208ENST00000487245 KLHL7Q8IXQ5 586 aa28.31■■■□□ 2.12
HLA-C-208ENST00000487245 SLITRK6Q9H5Y7 841 aa28.31■■■□□ 2.12
HLA-C-208ENST00000487245 RPAP3Q9H6T3 665 aaPredicted RBP28.31■■■□□ 2.12
HLA-C-208ENST00000487245 ANKEF1Q9NU02 776 aa28.31■■■□□ 2.12
HLA-C-208ENST00000487245 NOC2LQ9Y3T9 749 aaKnown RBP28.31■■■□□ 2.12
HLA-C-208ENST00000487245 EIF2AK2P19525 551 aaKnown RBP28.3■■■□□ 2.12
HLA-C-208ENST00000487245 YWHABP31946 246 aaKnown RBP28.3■■■□□ 2.12
HLA-C-208ENST00000487245 GALCP54803 685 aa28.3■■■□□ 2.12
HLA-C-208ENST00000487245 CORO7P57737 925 aa28.3■■■□□ 2.12
HLA-C-208ENST00000487245 ERVK-9P63128 1117 aa28.3■■■□□ 2.12
HLA-C-208ENST00000487245 CBWD6Q4V339 395 aa28.3■■■□□ 2.12
HLA-C-208ENST00000487245 CBWD3Q5JTY5 395 aa28.3■■■□□ 2.12
HLA-C-208ENST00000487245 CBWD5Q5RIA9 395 aa28.3■■■□□ 2.12
HLA-C-208ENST00000487245 KDM7AQ6ZMT4 941 aa28.3■■■□□ 2.12
HLA-C-208ENST00000487245 RNF207Q6ZRF8 634 aa28.3■■■□□ 2.12
HLA-C-208ENST00000487245 HOMER2Q9NSB8 354 aa28.3■■■□□ 2.12
HLA-C-208ENST00000487245 WDR64B1ANS9 1081 aa28.29■■■□□ 2.12
HLA-C-208ENST00000487245 ECHS1P30084 290 aa28.29■■■□□ 2.12
HLA-C-208ENST00000487245 GTF2BQ00403 316 aa28.29■■■□□ 2.12
HLA-C-208ENST00000487245 RMDN3Q96TC7 470 aa28.29■■■□□ 2.12
HLA-C-208ENST00000487245 PDCD2LQ9BRP1 358 aa28.29■■■□□ 2.12
HLA-C-208ENST00000487245 FAM107BQ9H098 131 aa28.29■■■□□ 2.12
HLA-C-208ENST00000487245 AS3MTQ9HBK9 375 aa28.29■■■□□ 2.12
HLA-C-208ENST00000487245 PXMP2Q9NR77 195 aa28.29■■■□□ 2.12
HLA-C-208ENST00000487245 RNASE9P60153 205 aaKnown RBP28.29■■■□□ 2.12
HLA-C-208ENST00000487245 GNGT1P63211 74 aa28.29■■■□□ 2.12
HLA-C-208ENST00000487245 MTMR2Q13614 643 aa28.29■■■□□ 2.12
HLA-C-208ENST00000487245 RFFLQ8WZ73 363 aa28.29■■■□□ 2.12
HLA-C-208ENST00000487245 GPR88Q9GZN0 384 aa28.29■■■□□ 2.12
HLA-C-208ENST00000487245 TRIM49P0CI25 452 aa28.28■■■□□ 2.12
HLA-C-208ENST00000487245 TRIM49CP0CI26 452 aa28.28■■■□□ 2.12
HLA-C-208ENST00000487245 MYCLP12524 364 aaPredicted RBP28.28■■■□□ 2.12
HLA-C-208ENST00000487245 PPATQ06203 517 aa28.28■■■□□ 2.12
HLA-C-208ENST00000487245 ARHGEF16Q5VV41 709 aa28.28■■■□□ 2.12
HLA-C-208ENST00000487245 AMFRQ9UKV5 643 aa28.28■■■□□ 2.12
HLA-C-208ENST00000487245 GUCY2FP51841 1108 aa28.27■■■□□ 2.12
HLA-C-208ENST00000487245 PLS1Q14651 629 aa28.27■■■□□ 2.12
HLA-C-208ENST00000487245 MAEAQ7L5Y9 396 aa28.27■■■□□ 2.12
HLA-C-208ENST00000487245 SEC14L1Q92503 715 aa28.27■■■□□ 2.12
HLA-C-208ENST00000487245 GOLPH3Q9H4A6 298 aa28.27■■■□□ 2.12
HLA-C-208ENST00000487245 VWA5AO00534 786 aa28.27■■■□□ 2.12
HLA-C-208ENST00000487245 MAFGO15525 162 aa28.27■■■□□ 2.12
HLA-C-208ENST00000487245 SART1O43290 800 aaKnown RBP28.27■■■□□ 2.12
HLA-C-208ENST00000487245 VAMP7P51809 220 aa28.27■■■□□ 2.12
HLA-C-208ENST00000487245 KIF22Q14807 665 aa28.27■■■□□ 2.12
HLA-C-208ENST00000487245 HAUS6Q7Z4H7 955 aa28.27■■■□□ 2.12
HLA-C-208ENST00000487245 XXYLT1Q8NBI6 393 aa28.27■■■□□ 2.12
HLA-C-208ENST00000487245 LRRC45Q96CN5 670 aa28.27■■■□□ 2.12
HLA-C-208ENST00000487245 EXOC7Q9UPT5 735 aa28.27■■■□□ 2.12
HLA-C-208ENST00000487245 ASTN2O75129 1339 aaPredicted RBP28.27■■■□□ 2.12
HLA-C-208ENST00000487245 TMCO5BA8MYB1 307 aa28.26■■■□□ 2.11
HLA-C-208ENST00000487245 HMGB1P1B2RPK0 211 aaPredicted RBP28.26■■■□□ 2.11
HLA-C-208ENST00000487245 PMM2O15305 246 aa28.26■■■□□ 2.11
HLA-C-208ENST00000487245 DEFB132Q7Z7B7 95 aa28.26■■■□□ 2.11
HLA-C-208ENST00000487245 DAAM2Q86T65 1068 aa28.26■■■□□ 2.11
HLA-C-208ENST00000487245 HVCN1Q96D96 273 aa28.26■■■□□ 2.11
HLA-C-208ENST00000487245 SENP7Q9BQF6 1050 aa28.26■■■□□ 2.11
HLA-C-208ENST00000487245 SCAF8Q9UPN6 1271 aaKnown RBP28.26■■■□□ 2.11
HLA-C-208ENST00000487245 ZEB2O60315 1214 aa28.25■■■□□ 2.11
HLA-C-208ENST00000487245 KRT14P02533 472 aa28.25■■■□□ 2.11
HLA-C-208ENST00000487245 CCND2P30279 289 aa28.25■■■□□ 2.11
HLA-C-208ENST00000487245 MAGEA9P43362 315 aa28.25■■■□□ 2.11
HLA-C-208ENST00000487245 NCKAP1LP55160 1127 aa28.25■■■□□ 2.11
HLA-C-208ENST00000487245 TCEAL1Q15170 157 aa28.25■■■□□ 2.11
HLA-C-208ENST00000487245 TRADDQ15628 312 aa28.25■■■□□ 2.11
HLA-C-208ENST00000487245 MICALL2Q8IY33 904 aa28.25■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms