RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 CHGBP05060 677 aa6.4□□□□□ -1.38
PRPF38A-203ENST00000487160 NRG3P56975 720 aa6.4□□□□□ -1.38
PRPF38A-203ENST00000487160 CD69Q07108 199 aa6.4□□□□□ -1.38
PRPF38A-203ENST00000487160 MGAT5Q09328 741 aa6.4□□□□□ -1.38
PRPF38A-203ENST00000487160 GRM3Q14832 879 aa6.4□□□□□ -1.38
PRPF38A-203ENST00000487160 PRR31Q5SQ13 230 aa6.4□□□□□ -1.38
PRPF38A-203ENST00000487160 LMBR1LQ6UX01 489 aa6.4□□□□□ -1.38
PRPF38A-203ENST00000487160 KSR2Q6VAB6 950 aa6.4□□□□□ -1.38
PRPF38A-203ENST00000487160 USP45Q70EL2 814 aa6.4□□□□□ -1.38
PRPF38A-203ENST00000487160 GLB1L2Q8IW92 636 aa6.4□□□□□ -1.38
PRPF38A-203ENST00000487160 CCAR1Q8IX12 1150 aaKnown RBP6.4□□□□□ -1.38
PRPF38A-203ENST00000487160 GLB1L3Q8NCI6 653 aaPredicted RBP6.4□□□□□ -1.38
PRPF38A-203ENST00000487160 FNIP1Q8TF40 1166 aa6.4□□□□□ -1.38
PRPF38A-203ENST00000487160 ZCCHC14Q8WYQ9 949 aaKnown RBP6.4□□□□□ -1.38
PRPF38A-203ENST00000487160 RUNDC1Q96C34 613 aa6.4□□□□□ -1.38
PRPF38A-203ENST00000487160 TIFAQ96CG3 184 aa6.4□□□□□ -1.38
PRPF38A-203ENST00000487160 GREM2Q9H772 168 aa6.4□□□□□ -1.38
PRPF38A-203ENST00000487160 ARNT2Q9HBZ2 717 aa6.4□□□□□ -1.38
PRPF38A-203ENST00000487160 PRDM11Q9NQV5 511 aa6.4□□□□□ -1.38
PRPF38A-203ENST00000487160 POLR3BQ9NW08 1133 aaPredicted RBP6.4□□□□□ -1.38
PRPF38A-203ENST00000487160 SAP30BPQ9UHR5 308 aaKnown RBP6.4□□□□□ -1.38
PRPF38A-203ENST00000487160 SCOCQ9UIL1 159 aa6.4□□□□□ -1.38
PRPF38A-203ENST00000487160 FBXO10Q9UK96 956 aa6.4□□□□□ -1.38
PRPF38A-203ENST00000487160 INTUQ9ULD6 942 aa6.4□□□□□ -1.38
PRPF38A-203ENST00000487160 CUX2O14529 1486 aa6.4□□□□□ -1.39
PRPF38A-203ENST00000487160 HTRA2O43464 458 aaPredicted RBP6.39□□□□□ -1.39
PRPF38A-203ENST00000487160 MYBP10242 640 aa6.39□□□□□ -1.39
PRPF38A-203ENST00000487160 EDNRBP24530 442 aa6.39□□□□□ -1.39
PRPF38A-203ENST00000487160 MCAMP43121 646 aa6.39□□□□□ -1.39
PRPF38A-203ENST00000487160 STAT5BP51692 787 aa6.39□□□□□ -1.39
PRPF38A-203ENST00000487160 KCNQ1P51787 676 aa6.39□□□□□ -1.39
PRPF38A-203ENST00000487160 FAM129CQ86XR2 697 aa6.39□□□□□ -1.39
PRPF38A-203ENST00000487160 GRAMD1CQ8IYS0 662 aa6.39□□□□□ -1.39
PRPF38A-203ENST00000487160 PRR18Q8N4B5 295 aa6.39□□□□□ -1.39
PRPF38A-203ENST00000487160 PPP1R14CQ8TAE6 165 aa6.39□□□□□ -1.39
PRPF38A-203ENST00000487160 DPF2Q92785 391 aa6.39□□□□□ -1.39
PRPF38A-203ENST00000487160 SIGLEC10Q96LC7 697 aa6.39□□□□□ -1.39
PRPF38A-203ENST00000487160 WDR92Q96MX6 357 aa6.39□□□□□ -1.39
PRPF38A-203ENST00000487160 TAAR9Q96RI9 348 aa6.39□□□□□ -1.39
PRPF38A-203ENST00000487160 MAP3K14Q99558 947 aa6.39□□□□□ -1.39
PRPF38A-203ENST00000487160 ADI1Q9BV57 179 aa6.39□□□□□ -1.39
PRPF38A-203ENST00000487160 EPB41L4AQ9HCS5 686 aaPredicted RBP6.39□□□□□ -1.39
PRPF38A-203ENST00000487160 IPPQ9Y573 584 aa6.39□□□□□ -1.39
PRPF38A-203ENST00000487160 IRAK3Q9Y616 596 aa6.39□□□□□ -1.39
PRPF38A-203ENST00000487160 ZCCHC6Q5VYS8 1495 aaKnown RBP6.39□□□□□ -1.39
PRPF38A-203ENST00000487160 DCAF1Q9Y4B6 1507 aa6.39□□□□□ -1.39
PRPF38A-203ENST00000487160 DDX3XO00571 662 aaKnown RBP eCLIP6.38□□□□□ -1.39
PRPF38A-203ENST00000487160 LY86O95711 162 aa6.38□□□□□ -1.39
PRPF38A-203ENST00000487160 MYL1P05976 194 aa6.38□□□□□ -1.39
PRPF38A-203ENST00000487160 HNRNPLP14866 589 aaKnown RBP eCLIP6.38□□□□□ -1.39
PRPF38A-203ENST00000487160 ZNF28P17035 718 aa6.38□□□□□ -1.39
PRPF38A-203ENST00000487160 PPP3CAQ08209 521 aa6.38□□□□□ -1.39
PRPF38A-203ENST00000487160 TOP3AQ13472 1001 aaPredicted RBP6.38□□□□□ -1.39
PRPF38A-203ENST00000487160 GBX1Q14549 363 aa6.38□□□□□ -1.39
PRPF38A-203ENST00000487160 EIF4HQ15056 248 aaKnown RBP6.38□□□□□ -1.39
PRPF38A-203ENST00000487160 C3orf36Q3SXR2 165 aa6.38□□□□□ -1.39
PRPF38A-203ENST00000487160 CNKSR3Q6P9H4 555 aa6.38□□□□□ -1.39
PRPF38A-203ENST00000487160 NUDT10Q8NFP7 164 aa6.38□□□□□ -1.39
PRPF38A-203ENST00000487160 RIN2Q8WYP3 895 aaPredicted RBP6.38□□□□□ -1.39
PRPF38A-203ENST00000487160 NKD2Q969F2 451 aaPredicted RBP6.38□□□□□ -1.39
PRPF38A-203ENST00000487160 MVB12AQ96EY5 273 aa6.38□□□□□ -1.39
PRPF38A-203ENST00000487160 NUDT11Q96G61 164 aa6.38□□□□□ -1.39
PRPF38A-203ENST00000487160 PCGF6Q9BYE7 350 aa6.38□□□□□ -1.39
PRPF38A-203ENST00000487160 OSBPL6Q9BZF3 934 aa6.38□□□□□ -1.39
PRPF38A-203ENST00000487160 C1orf112Q9NSG2 853 aa6.38□□□□□ -1.39
PRPF38A-203ENST00000487160 FRMPD2Q68DX3 1309 aaPredicted RBP6.38□□□□□ -1.39
PRPF38A-203ENST00000487160 KLHL18O94889 574 aa6.37□□□□□ -1.39
PRPF38A-203ENST00000487160 RPL13P26373 211 aaKnown RBP6.37□□□□□ -1.39
PRPF38A-203ENST00000487160 POLD1P28340 1107 aa6.37□□□□□ -1.39
PRPF38A-203ENST00000487160 SSPNQ14714 243 aa6.37□□□□□ -1.39
PRPF38A-203ENST00000487160 NOMO1Q15155 1222 aa6.37□□□□□ -1.39
PRPF38A-203ENST00000487160 SYDE1Q6ZW31 735 aaPredicted RBP6.37□□□□□ -1.39
PRPF38A-203ENST00000487160 OR2I1PQ8NGU4 316 aa6.37□□□□□ -1.39
PRPF38A-203ENST00000487160 DIS3LQ8TF46 1054 aaKnown RBP6.37□□□□□ -1.39
PRPF38A-203ENST00000487160 PWWP2AQ96N64 755 aa6.37□□□□□ -1.39
PRPF38A-203ENST00000487160 ACO2Q99798 780 aaKnown RBP6.37□□□□□ -1.39
PRPF38A-203ENST00000487160 L2HGDHQ9H9P8 463 aa6.37□□□□□ -1.39
PRPF38A-203ENST00000487160 A0A1W2PR48 441 aa6.36□□□□□ -1.39
PRPF38A-203ENST00000487160 TMEM127O75204 238 aa6.36□□□□□ -1.39
PRPF38A-203ENST00000487160 PEX14O75381 377 aa6.36□□□□□ -1.39
PRPF38A-203ENST00000487160 FSBPO95073 299 aa6.36□□□□□ -1.39
PRPF38A-203ENST00000487160 GAAP10253 952 aa6.36□□□□□ -1.39
PRPF38A-203ENST00000487160 PI3P19957 117 aa6.36□□□□□ -1.39
PRPF38A-203ENST00000487160 CTSSP25774 331 aa6.36□□□□□ -1.39
PRPF38A-203ENST00000487160 WASP42768 502 aa6.36□□□□□ -1.39
PRPF38A-203ENST00000487160 MESP2Q0VG99 397 aa6.36□□□□□ -1.39
PRPF38A-203ENST00000487160 IL10RAQ13651 578 aa6.36□□□□□ -1.39
PRPF38A-203ENST00000487160 MAN2A1Q16706 1144 aa6.36□□□□□ -1.39
PRPF38A-203ENST00000487160 PGS1Q32NB8 556 aa6.36□□□□□ -1.39
PRPF38A-203ENST00000487160 PPP4R4Q6NUP7 873 aa6.36□□□□□ -1.39
PRPF38A-203ENST00000487160 KLHDC10Q6PID8 442 aa6.36□□□□□ -1.39
PRPF38A-203ENST00000487160 ABHD15Q6UXT9 468 aa6.36□□□□□ -1.39
PRPF38A-203ENST00000487160 IFNL2Q8IZJ0 200 aa6.36□□□□□ -1.39
PRPF38A-203ENST00000487160 ZBTB34Q8NCN2 500 aa6.36□□□□□ -1.39
PRPF38A-203ENST00000487160 PIK3C3Q8NEB9 887 aa6.36□□□□□ -1.39
PRPF38A-203ENST00000487160 GPR156Q8NFN8 814 aa6.36□□□□□ -1.39
PRPF38A-203ENST00000487160 PPP1R35Q8TAP8 253 aa6.36□□□□□ -1.39
PRPF38A-203ENST00000487160 ZNF526Q8TF50 670 aaPredicted RBP6.36□□□□□ -1.39
PRPF38A-203ENST00000487160 PAWRQ96IZ0 340 aaKnown RBP6.36□□□□□ -1.39
PRPF38A-203ENST00000487160 RBM12Q9NTZ6 932 aaKnown RBP6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms