RNA–Protein interactions for RNA: ENST00000487062.1

SF3A3-206, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-206ENST00000487062 KCND1Q9NSA2 647 aa7.72□□□□□ -1.17
SF3A3-206ENST00000487062 SPTLC3Q9NUV7 552 aa7.72□□□□□ -1.17
SF3A3-206ENST00000487062 ZNHIT6Q9NWK9 470 aaKnown RBP7.72□□□□□ -1.17
SF3A3-206ENST00000487062 TELO2Q9Y4R8 837 aa7.72□□□□□ -1.17
SF3A3-206ENST00000487062 SIP14410 1827 aa7.72□□□□□ -1.17
SF3A3-206ENST00000487062 DENND3A2RUS2 1198 aa7.71□□□□□ -1.18
SF3A3-206ENST00000487062 FAM155AB1AL88 458 aaPredicted RBP7.71□□□□□ -1.18
SF3A3-206ENST00000487062 MAPK13O15264 365 aa7.71□□□□□ -1.18
SF3A3-206ENST00000487062 ZSCAN12O43309 604 aa7.71□□□□□ -1.18
SF3A3-206ENST00000487062 EXOC3O60645 756 aa7.71□□□□□ -1.18
SF3A3-206ENST00000487062 AKAP3O75969 853 aa7.71□□□□□ -1.18
SF3A3-206ENST00000487062 TOMM70O94826 608 aa7.71□□□□□ -1.18
SF3A3-206ENST00000487062 SNAI1O95863 264 aaPredicted RBP7.71□□□□□ -1.18
SF3A3-206ENST00000487062 HOXC6P09630 235 aa7.71□□□□□ -1.18
SF3A3-206ENST00000487062 KRT9P35527 623 aa7.71□□□□□ -1.18
SF3A3-206ENST00000487062 RGS2P41220 211 aa7.71□□□□□ -1.18
SF3A3-206ENST00000487062 NAMPTP43490 491 aa7.71□□□□□ -1.18
SF3A3-206ENST00000487062 FXR1P51114 621 aaKnown RBP eCLIP7.71□□□□□ -1.18
SF3A3-206ENST00000487062 CYP2J2P51589 502 aa7.71□□□□□ -1.18
SF3A3-206ENST00000487062 ZBED6P86452 979 aa7.71□□□□□ -1.18
SF3A3-206ENST00000487062 ARHGAP1Q07960 439 aa7.71□□□□□ -1.18
SF3A3-206ENST00000487062 KCNH2Q12809 1159 aa7.71□□□□□ -1.18
SF3A3-206ENST00000487062 STRN3Q13033 797 aa7.71□□□□□ -1.18
SF3A3-206ENST00000487062 ACVR2BQ13705 512 aa7.71□□□□□ -1.18
SF3A3-206ENST00000487062 PLCB4Q15147 1175 aa7.71□□□□□ -1.18
SF3A3-206ENST00000487062 TARBP2Q15633 366 aaKnown RBP7.71□□□□□ -1.18
SF3A3-206ENST00000487062 DUSP28Q4G0W2 176 aa7.71□□□□□ -1.18
SF3A3-206ENST00000487062 ZNF484Q5JVG2 852 aa7.71□□□□□ -1.18
SF3A3-206ENST00000487062 TCERG1LQ5VWI1 586 aa7.71□□□□□ -1.18
SF3A3-206ENST00000487062 CYP26C1Q6V0L0 522 aa7.71□□□□□ -1.18
SF3A3-206ENST00000487062 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.71□□□□□ -1.18
SF3A3-206ENST00000487062 TMTC1Q8IUR5 882 aa7.71□□□□□ -1.18
SF3A3-206ENST00000487062 MAP4K3Q8IVH8 894 aa7.71□□□□□ -1.18
SF3A3-206ENST00000487062 KSR1Q8IVT5 923 aa7.71□□□□□ -1.18
SF3A3-206ENST00000487062 TMEM161BQ8NDZ6 487 aa7.71□□□□□ -1.18
SF3A3-206ENST00000487062 NPLOC4Q8TAT6 608 aa7.71□□□□□ -1.18
SF3A3-206ENST00000487062 DEPTORQ8TB45 409 aa7.71□□□□□ -1.18
SF3A3-206ENST00000487062 TMEM174Q8WUU8 243 aa7.71□□□□□ -1.18
SF3A3-206ENST00000487062 COPS5Q92905 334 aa7.71□□□□□ -1.18
SF3A3-206ENST00000487062 NUCKS1Q9H1E3 243 aaKnown RBP7.71□□□□□ -1.18
SF3A3-206ENST00000487062 MMRN2Q9H8L6 949 aa7.71□□□□□ -1.18
SF3A3-206ENST00000487062 NPDC1Q9NQX5 325 aaPredicted RBP7.71□□□□□ -1.18
SF3A3-206ENST00000487062 ABHD10Q9NUJ1 306 aa7.71□□□□□ -1.18
SF3A3-206ENST00000487062 DMAC2Q9NW81 257 aa7.71□□□□□ -1.18
SF3A3-206ENST00000487062 ERAP1Q9NZ08 941 aa7.71□□□□□ -1.18
SF3A3-206ENST00000487062 ZHX1Q9UKY1 873 aaPredicted RBP7.71□□□□□ -1.18
SF3A3-206ENST00000487062 TBX20Q9UMR3 447 aa7.71□□□□□ -1.18
SF3A3-206ENST00000487062 PHLPP2Q6ZVD8 1323 aa7.71□□□□□ -1.18
SF3A3-206ENST00000487062 DOCK3Q8IZD9 2030 aa7.71□□□□□ -1.18
SF3A3-206ENST00000487062 KAT6AQ92794 2004 aa7.71□□□□□ -1.18
SF3A3-206ENST00000487062 TTC26A0AVF1 554 aa7.7□□□□□ -1.18
SF3A3-206ENST00000487062 GTPBP10A4D1E9 387 aaKnown RBP7.7□□□□□ -1.18
SF3A3-206ENST00000487062 GOLGA6L9A6NEM1 432 aa7.7□□□□□ -1.18
SF3A3-206ENST00000487062 LRRIQ4A6NIV6 560 aa7.7□□□□□ -1.18
SF3A3-206ENST00000487062 KIF2AO00139 706 aaPredicted RBP7.7□□□□□ -1.18
SF3A3-206ENST00000487062 TNPO2O14787 897 aaKnown RBP7.7□□□□□ -1.18
SF3A3-206ENST00000487062 KIAA0391O15091 583 aaKnown RBP7.7□□□□□ -1.18
SF3A3-206ENST00000487062 CA12O43570 354 aa7.7□□□□□ -1.18
SF3A3-206ENST00000487062 N4BP1O75113 896 aaKnown RBP7.7□□□□□ -1.18
SF3A3-206ENST00000487062 PPFIA4O75335 1185 aa7.7□□□□□ -1.18
SF3A3-206ENST00000487062 TUBB4AP04350 444 aa7.7□□□□□ -1.18
SF3A3-206ENST00000487062 MARK3P27448 753 aa7.7□□□□□ -1.18
SF3A3-206ENST00000487062 SSTR3P32745 418 aaPredicted RBP7.7□□□□□ -1.18
SF3A3-206ENST00000487062 ARL2P36404 184 aa7.7□□□□□ -1.18
SF3A3-206ENST00000487062 ADCYAP1R1P41586 468 aa7.7□□□□□ -1.18
SF3A3-206ENST00000487062 CASP4P49662 377 aa7.7□□□□□ -1.18
SF3A3-206ENST00000487062 GOLGA8FQ08AF8 430 aa7.7□□□□□ -1.18
SF3A3-206ENST00000487062 GOLGA8DPQ0D2H9 430 aa7.7□□□□□ -1.18
SF3A3-206ENST00000487062 NOGQ13253 232 aa7.7□□□□□ -1.18
SF3A3-206ENST00000487062 MXD4Q14582 209 aaPredicted RBP7.7□□□□□ -1.18
SF3A3-206ENST00000487062 BRDTQ58F21 947 aaPredicted RBP7.7□□□□□ -1.18
SF3A3-206ENST00000487062 DCAF17Q5H9S7 520 aaPredicted RBP7.7□□□□□ -1.18
SF3A3-206ENST00000487062 OLFML2BQ68BL8 750 aa7.7□□□□□ -1.18
SF3A3-206ENST00000487062 INTS8Q75QN2 995 aaKnown RBP7.7□□□□□ -1.18
SF3A3-206ENST00000487062 CACNA2D4Q7Z3S7 1137 aa7.7□□□□□ -1.18
SF3A3-206ENST00000487062 USP37Q86T82 979 aa7.7□□□□□ -1.18
SF3A3-206ENST00000487062 TMEM139Q8IV31 216 aa7.7□□□□□ -1.18
SF3A3-206ENST00000487062 CCAR2Q8N163 923 aaKnown RBP7.7□□□□□ -1.18
SF3A3-206ENST00000487062 XXYLT1Q8NBI6 393 aa7.7□□□□□ -1.18
SF3A3-206ENST00000487062 OR6J1Q8NGC5 347 aa7.7□□□□□ -1.18
SF3A3-206ENST00000487062 PPTC7Q8NI37 304 aa7.7□□□□□ -1.18
SF3A3-206ENST00000487062 BSNDQ8WZ55 320 aa7.7□□□□□ -1.18
SF3A3-206ENST00000487062 KCNN1Q92952 543 aa7.7□□□□□ -1.18
SF3A3-206ENST00000487062 TMEM143Q96AN5 459 aa7.7□□□□□ -1.18
SF3A3-206ENST00000487062 BICD1Q96G01 975 aa7.7□□□□□ -1.18
SF3A3-206ENST00000487062 CEP89Q96ST8 783 aa7.7□□□□□ -1.18
SF3A3-206ENST00000487062 DNAJC7Q99615 494 aa7.7□□□□□ -1.18
SF3A3-206ENST00000487062 APBA2Q99767 749 aa7.7□□□□□ -1.18
SF3A3-206ENST00000487062 KATNBL1Q9H079 304 aa7.7□□□□□ -1.18
SF3A3-206ENST00000487062 C2orf40Q9H1Z8 148 aa7.7□□□□□ -1.18
SF3A3-206ENST00000487062 TMEM134Q9H6X4 195 aa7.7□□□□□ -1.18
SF3A3-206ENST00000487062 ARHGAP28Q9P2N2 729 aa7.7□□□□□ -1.18
SF3A3-206ENST00000487062 ZNF215Q9UL58 517 aaPredicted RBP7.7□□□□□ -1.18
SF3A3-206ENST00000487062 SIK3Q9Y2K2 1263 aa7.7□□□□□ -1.18
SF3A3-206ENST00000487062 ZSWIM8A7E2V4 1837 aa7.7□□□□□ -1.18
SF3A3-206ENST00000487062 COL1A2P08123 1366 aa7.7□□□□□ -1.18
SF3A3-206ENST00000487062 EVPLQ92817 2033 aa7.69□□□□□ -1.18
SF3A3-206ENST00000487062 K7ERI5 159 aa7.69□□□□□ -1.18
SF3A3-206ENST00000487062 HNRNPDLO14979 420 aaKnown RBP7.69□□□□□ -1.18
SF3A3-206ENST00000487062 MAGEB2O15479 319 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms