RNA–Protein interactions for RNA: ENST00000486960.5

SF1-217, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-217ENST00000486960 ADCY3O60266 1144 aa6.11□□□□□ -1.43
SF1-217ENST00000486960 CTNND1O60716 968 aaKnown RBP6.11□□□□□ -1.43
SF1-217ENST00000486960 CLASP2O75122 1294 aaKnown RBP6.11□□□□□ -1.43
SF1-217ENST00000486960 GUCA1CO95843 209 aa6.11□□□□□ -1.43
SF1-217ENST00000486960 SDSP20132 328 aa6.11□□□□□ -1.43
SF1-217ENST00000486960 GSTT1P30711 240 aa6.11□□□□□ -1.43
SF1-217ENST00000486960 IRS1P35568 1242 aa6.11□□□□□ -1.43
SF1-217ENST00000486960 CD86P42081 329 aa6.11□□□□□ -1.43
SF1-217ENST00000486960 USP14P54578 494 aa6.11□□□□□ -1.43
SF1-217ENST00000486960 LACTBP83111 547 aaPredicted RBP6.11□□□□□ -1.43
SF1-217ENST00000486960 UBXN1Q04323 297 aa6.11□□□□□ -1.43
SF1-217ENST00000486960 PPP2R3AQ06190 1150 aa6.11□□□□□ -1.43
SF1-217ENST00000486960 CDC16Q13042 620 aa6.11□□□□□ -1.43
SF1-217ENST00000486960 GRB10Q13322 594 aa6.11□□□□□ -1.43
SF1-217ENST00000486960 PDE3AQ14432 1141 aa6.11□□□□□ -1.43
SF1-217ENST00000486960 SLC14A2Q15849 920 aa6.11□□□□□ -1.43
SF1-217ENST00000486960 ASIC2Q16515 512 aa6.11□□□□□ -1.43
SF1-217ENST00000486960 ST3GAL2Q16842 350 aa6.11□□□□□ -1.43
SF1-217ENST00000486960 C5orf22Q49AR2 442 aa6.11□□□□□ -1.43
SF1-217ENST00000486960 AMOTQ4VCS5 1084 aa6.11□□□□□ -1.43
SF1-217ENST00000486960 SEZ6Q53EL9 994 aa6.11□□□□□ -1.43
SF1-217ENST00000486960 ODF2Q5BJF6 829 aa6.11□□□□□ -1.43
SF1-217ENST00000486960 HGSNATQ68CP4 663 aa6.11□□□□□ -1.43
SF1-217ENST00000486960 SLC6A19Q695T7 634 aa6.11□□□□□ -1.43
SF1-217ENST00000486960 FIP1L1Q6UN15 594 aaKnown RBP6.11□□□□□ -1.43
SF1-217ENST00000486960 C6orf15Q6UXA7 325 aaPredicted RBP6.11□□□□□ -1.43
SF1-217ENST00000486960 CCDC91Q7Z6B0 441 aa6.11□□□□□ -1.43
SF1-217ENST00000486960 GOLM1Q8NBJ4 401 aa6.11□□□□□ -1.43
SF1-217ENST00000486960 PPP1R14CQ8TAE6 165 aa6.11□□□□□ -1.43
SF1-217ENST00000486960 ADAM32Q8TC27 787 aa6.11□□□□□ -1.43
SF1-217ENST00000486960 KIAA1524Q8TCG1 905 aa6.11□□□□□ -1.43
SF1-217ENST00000486960 ADAMTS18Q8TE60 1221 aa6.11□□□□□ -1.43
SF1-217ENST00000486960 ZNF606Q8WXB4 792 aa6.11□□□□□ -1.43
SF1-217ENST00000486960 KCTD13Q8WZ19 329 aa6.11□□□□□ -1.43
SF1-217ENST00000486960 GPKOWQ92917 476 aaPredicted RBP eCLIP6.11□□□□□ -1.43
SF1-217ENST00000486960 HSPBAP1Q96EW2 488 aa6.11□□□□□ -1.43
SF1-217ENST00000486960 RHOVQ96L33 236 aa6.11□□□□□ -1.43
SF1-217ENST00000486960 TRIM47Q96LD4 638 aa6.11□□□□□ -1.43
SF1-217ENST00000486960 IPO9Q96P70 1041 aaKnown RBP6.11□□□□□ -1.43
SF1-217ENST00000486960 NUP88Q99567 741 aaPredicted RBP6.11□□□□□ -1.43
SF1-217ENST00000486960 HAUS7Q99871 368 aa6.11□□□□□ -1.43
SF1-217ENST00000486960 C7orf25Q9BPX7 421 aa6.11□□□□□ -1.43
SF1-217ENST00000486960 BCO2Q9BYV7 579 aa6.11□□□□□ -1.43
SF1-217ENST00000486960 KIAA1683Q9H0B3 1180 aa6.11□□□□□ -1.43
SF1-217ENST00000486960 IFT22Q9H7X7 185 aa6.11□□□□□ -1.43
SF1-217ENST00000486960 RSAD1Q9HA92 442 aa6.11□□□□□ -1.43
SF1-217ENST00000486960 PAK6Q9NQU5 681 aaPredicted RBP6.11□□□□□ -1.43
SF1-217ENST00000486960 PRDM5Q9NQX1 630 aaPredicted RBP6.11□□□□□ -1.43
SF1-217ENST00000486960 PDLIM7Q9NR12 457 aa6.11□□□□□ -1.43
SF1-217ENST00000486960 EXOC1Q9NV70 894 aa6.11□□□□□ -1.43
SF1-217ENST00000486960 HPF1Q9NWY4 346 aa6.11□□□□□ -1.43
SF1-217ENST00000486960 AIPL1Q9NZN9 384 aa6.11□□□□□ -1.43
SF1-217ENST00000486960 ANKIB1Q9P2G1 1089 aa6.11□□□□□ -1.43
SF1-217ENST00000486960 IFT80Q9P2H3 777 aaPredicted RBP6.11□□□□□ -1.43
SF1-217ENST00000486960 SUCOQ9UBS9 1254 aaKnown RBP6.11□□□□□ -1.43
SF1-217ENST00000486960 FAM198AQ9UFP1 575 aa6.11□□□□□ -1.43
SF1-217ENST00000486960 ZHX1Q9UKY1 873 aaPredicted RBP6.11□□□□□ -1.43
SF1-217ENST00000486960 DSPP15924 2871 aaKnown RBP6.11□□□□□ -1.43
SF1-217ENST00000486960 WDFY3Q8IZQ1 3526 aa6.11□□□□□ -1.43
SF1-217ENST00000486960 SOWAHBA6NEL2 793 aa6.1□□□□□ -1.43
SF1-217ENST00000486960 AKR1B15C9JRZ8 316 aaPredicted RBP6.1□□□□□ -1.43
SF1-217ENST00000486960 ZEB2O60315 1214 aa6.1□□□□□ -1.43
SF1-217ENST00000486960 PQBP1O60828 265 aaKnown RBP6.1□□□□□ -1.43
SF1-217ENST00000486960 TADA3O75528 432 aa6.1□□□□□ -1.43
SF1-217ENST00000486960 MTRF1O75570 445 aaKnown RBP6.1□□□□□ -1.43
SF1-217ENST00000486960 CAMTA2O94983 1202 aa6.1□□□□□ -1.43
SF1-217ENST00000486960 HSPA4LO95757 839 aa6.1□□□□□ -1.43
SF1-217ENST00000486960 L1CAMP32004 1257 aa6.1□□□□□ -1.43
SF1-217ENST00000486960 MCM4P33991 863 aa6.1□□□□□ -1.43
SF1-217ENST00000486960 PHKA1P46020 1223 aa6.1□□□□□ -1.43
SF1-217ENST00000486960 PSEN2P49810 448 aa6.1□□□□□ -1.43
SF1-217ENST00000486960 SESN3P58005 492 aa6.1□□□□□ -1.43
SF1-217ENST00000486960 INHBEP58166 350 aa6.1□□□□□ -1.43
SF1-217ENST00000486960 TCF15Q12870 199 aa6.1□□□□□ -1.43
SF1-217ENST00000486960 ZBTB17Q13105 803 aa6.1□□□□□ -1.43
SF1-217ENST00000486960 IFIT5Q13325 482 aaKnown RBP6.1□□□□□ -1.43
SF1-217ENST00000486960 SCARB2Q14108 478 aa6.1□□□□□ -1.43
SF1-217ENST00000486960 SCARF1Q14162 830 aa6.1□□□□□ -1.43
SF1-217ENST00000486960 CTC1Q2NKJ3 1217 aa6.1□□□□□ -1.43
SF1-217ENST00000486960 FILIP1LQ4L180 1135 aa6.1□□□□□ -1.43
SF1-217ENST00000486960 CCDC38Q502W7 563 aa6.1□□□□□ -1.43
SF1-217ENST00000486960 MUM1L1Q5H9M0 696 aa6.1□□□□□ -1.43
SF1-217ENST00000486960 WDR44Q5JSH3 913 aa6.1□□□□□ -1.43
SF1-217ENST00000486960 PKN3Q6P5Z2 889 aa6.1□□□□□ -1.43
SF1-217ENST00000486960 KDELC1Q6UW63 502 aa6.1□□□□□ -1.43
SF1-217ENST00000486960 ASCL5Q7RTU5 278 aa6.1□□□□□ -1.43
SF1-217ENST00000486960 MTERF4Q7Z6M4 381 aaKnown RBP6.1□□□□□ -1.43
SF1-217ENST00000486960 RALYLQ86SE5 291 aaKnown RBP6.1□□□□□ -1.43
SF1-217ENST00000486960 ARMC2Q8NEN0 867 aa6.1□□□□□ -1.43
SF1-217ENST00000486960 BTN2A2Q8WVV5 523 aa6.1□□□□□ -1.43
SF1-217ENST00000486960 CTNNBL1Q8WYA6 563 aaPredicted RBP6.1□□□□□ -1.43
SF1-217ENST00000486960 ATP2A3Q93084 1043 aa6.1□□□□□ -1.43
SF1-217ENST00000486960 KIF1BPQ96EK5 621 aa6.1□□□□□ -1.43
SF1-217ENST00000486960 GMCL1Q96IK5 515 aa6.1□□□□□ -1.43
SF1-217ENST00000486960 ZSCAN31Q96LW9 406 aaPredicted RBP6.1□□□□□ -1.43
SF1-217ENST00000486960 OCSTAMPQ9BR26 566 aa6.1□□□□□ -1.43
SF1-217ENST00000486960 TRIM56Q9BRZ2 755 aaKnown RBP6.1□□□□□ -1.43
SF1-217ENST00000486960 DESI2Q9BSY9 194 aa6.1□□□□□ -1.43
SF1-217ENST00000486960 TTLL2Q9BWV7 592 aa6.1□□□□□ -1.43
SF1-217ENST00000486960 FAM204AQ9H8W3 233 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms