RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 CLDN3O15551 220 aa13.35□□□□□ -0.27
HSPG2-211ENST00000486901 EXOC3O60645 756 aa13.35□□□□□ -0.27
HSPG2-211ENST00000486901 SPATA31C1P0DKV0 1188 aa13.35□□□□□ -0.27
HSPG2-211ENST00000486901 CHKAP35790 457 aa13.35□□□□□ -0.27
HSPG2-211ENST00000486901 SESN3P58005 492 aa13.35□□□□□ -0.27
HSPG2-211ENST00000486901 ARHGAP4P98171 946 aa13.35□□□□□ -0.27
HSPG2-211ENST00000486901 ZFYVE27Q5T4F4 411 aa13.35□□□□□ -0.27
HSPG2-211ENST00000486901 CYP4F22Q6NT55 531 aa13.35□□□□□ -0.27
HSPG2-211ENST00000486901 ZNF449Q6P9G9 518 aa13.35□□□□□ -0.27
HSPG2-211ENST00000486901 SRRM1Q8IYB3 904 aaKnown RBP13.35□□□□□ -0.27
HSPG2-211ENST00000486901 ARHGEF2Q92974 986 aaKnown RBP13.35□□□□□ -0.27
HSPG2-211ENST00000486901 ZDHHC18Q9NUE0 388 aa13.35□□□□□ -0.27
HSPG2-211ENST00000486901 STXBP5LQ9Y2K9 1186 aa13.35□□□□□ -0.27
HSPG2-211ENST00000486901 TMEM150BA6NC51 233 aa13.35□□□□□ -0.27
HSPG2-211ENST00000486901 LGR5O75473 907 aa13.35□□□□□ -0.27
HSPG2-211ENST00000486901 SOX5P35711 763 aa13.35□□□□□ -0.27
HSPG2-211ENST00000486901 CCNHP51946 323 aaPredicted RBP13.35□□□□□ -0.27
HSPG2-211ENST00000486901 CCDC127Q96BQ5 260 aa13.35□□□□□ -0.27
HSPG2-211ENST00000486901 C9orf72Q96LT7 481 aa13.35□□□□□ -0.27
HSPG2-211ENST00000486901 RMDN2Q96LZ7 410 aa13.35□□□□□ -0.27
HSPG2-211ENST00000486901 YIPF3Q9GZM5 350 aa13.35□□□□□ -0.27
HSPG2-211ENST00000486901 TMX4Q9H1E5 349 aaPredicted RBP13.35□□□□□ -0.27
HSPG2-211ENST00000486901 SLITRK6Q9H5Y7 841 aa13.35□□□□□ -0.27
HSPG2-211ENST00000486901 SWAP70Q9UH65 585 aa13.35□□□□□ -0.27
HSPG2-211ENST00000486901 ZBTB5O15062 677 aa13.35□□□□□ -0.27
HSPG2-211ENST00000486901 TGFB1I1O43294 461 aa13.35□□□□□ -0.27
HSPG2-211ENST00000486901 CALUO43852 315 aaPredicted RBP13.35□□□□□ -0.27
HSPG2-211ENST00000486901 ZBTB48P10074 688 aaPredicted RBP13.35□□□□□ -0.27
HSPG2-211ENST00000486901 GCFC2P16383 781 aaKnown RBP13.35□□□□□ -0.27
HSPG2-211ENST00000486901 MAPK7Q13164 816 aa13.35□□□□□ -0.27
HSPG2-211ENST00000486901 DUPD1Q68J44 220 aa13.35□□□□□ -0.27
HSPG2-211ENST00000486901 PHLDB3Q6NSJ2 640 aa13.35□□□□□ -0.27
HSPG2-211ENST00000486901 RFFLQ8WZ73 363 aa13.35□□□□□ -0.27
HSPG2-211ENST00000486901 CRAMP1Q96RY5 1269 aa13.35□□□□□ -0.27
HSPG2-211ENST00000486901 CCDC169A6NNP5 214 aa13.34□□□□□ -0.27
HSPG2-211ENST00000486901 TOM1O60784 492 aa13.34□□□□□ -0.27
HSPG2-211ENST00000486901 CFBP00751 764 aa13.34□□□□□ -0.27
HSPG2-211ENST00000486901 PDHA1P08559 390 aa13.34□□□□□ -0.27
HSPG2-211ENST00000486901 PTENP60484 403 aa13.34□□□□□ -0.27
HSPG2-211ENST00000486901 POU5F1Q01860 360 aaKnown RBP13.34□□□□□ -0.27
HSPG2-211ENST00000486901 XRCC4Q13426 336 aa13.34□□□□□ -0.27
HSPG2-211ENST00000486901 MPP2Q14168 576 aa13.34□□□□□ -0.27
HSPG2-211ENST00000486901 EXOC3L1Q86VI1 746 aa13.34□□□□□ -0.27
HSPG2-211ENST00000486901 ARHGEF1Q92888 912 aaKnown RBP13.34□□□□□ -0.27
HSPG2-211ENST00000486901 TRPC6Q9Y210 931 aa13.34□□□□□ -0.27
HSPG2-211ENST00000486901 DAGLAQ9Y4D2 1042 aa13.34□□□□□ -0.27
HSPG2-211ENST00000486901 PPFIA2O75334 1257 aa13.34□□□□□ -0.27
HSPG2-211ENST00000486901 TTLL1O95922 423 aa13.34□□□□□ -0.27
HSPG2-211ENST00000486901 COBLL1Q53SF7 1204 aa13.34□□□□□ -0.27
HSPG2-211ENST00000486901 RPUSD2Q8IZ73 545 aaKnown RBP13.34□□□□□ -0.27
HSPG2-211ENST00000486901 SYCE1Q8N0S2 351 aa13.34□□□□□ -0.27
HSPG2-211ENST00000486901 TLCD1Q96CP7 247 aa13.34□□□□□ -0.27
HSPG2-211ENST00000486901 RSRC1Q96IZ7 334 aaKnown RBP13.34□□□□□ -0.27
HSPG2-211ENST00000486901 GRHL1Q9NZI5 618 aa13.34□□□□□ -0.27
HSPG2-211ENST00000486901 RABGAP1Q9Y3P9 1069 aa13.34□□□□□ -0.27
HSPG2-211ENST00000486901 ABCB11O95342 1321 aa13.34□□□□□ -0.27
HSPG2-211ENST00000486901 MGRN1O60291 552 aa13.33□□□□□ -0.27
HSPG2-211ENST00000486901 AUHQ13825 339 aaKnown RBP13.33□□□□□ -0.27
HSPG2-211ENST00000486901 WLSQ5T9L3 541 aa13.33□□□□□ -0.27
HSPG2-211ENST00000486901 ARHGEF19Q8IW93 802 aa13.33□□□□□ -0.27
HSPG2-211ENST00000486901 CYP4X1Q8N118 509 aa13.33□□□□□ -0.27
HSPG2-211ENST00000486901 DYDC2Q96IM9 177 aa13.33□□□□□ -0.27
HSPG2-211ENST00000486901 CALR3Q96L12 384 aaKnown RBP13.33□□□□□ -0.27
HSPG2-211ENST00000486901 KIF9Q9HAQ2 790 aa13.33□□□□□ -0.27
HSPG2-211ENST00000486901 KLHL11Q9NVR0 708 aa13.33□□□□□ -0.27
HSPG2-211ENST00000486901 A0A1B0GUA9 196 aa13.33□□□□□ -0.28
HSPG2-211ENST00000486901 GSTTP1A0A1W2PQM5 241 aa13.33□□□□□ -0.28
HSPG2-211ENST00000486901 FMO5P49326 533 aa13.33□□□□□ -0.28
HSPG2-211ENST00000486901 EAPPQ56P03 285 aaPredicted RBP13.33□□□□□ -0.28
HSPG2-211ENST00000486901 ODR4Q5SWX8 454 aa13.33□□□□□ -0.28
HSPG2-211ENST00000486901 PPM1KQ8N3J5 372 aa13.33□□□□□ -0.28
HSPG2-211ENST00000486901 INTS2Q9H0H0 1204 aaKnown RBP13.33□□□□□ -0.28
HSPG2-211ENST00000486901 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.33□□□□□ -0.28
HSPG2-211ENST00000486901 ITGB4P16144 1822 aa13.33□□□□□ -0.28
HSPG2-211ENST00000486901 WDR91A4D1P6 747 aa13.33□□□□□ -0.28
HSPG2-211ENST00000486901 EME2A4GXA9 379 aaPredicted RBP13.33□□□□□ -0.28
HSPG2-211ENST00000486901 SGPL1O95470 568 aa13.33□□□□□ -0.28
HSPG2-211ENST00000486901 NCALDP61601 193 aa13.33□□□□□ -0.28
HSPG2-211ENST00000486901 PPP1R18Q6NYC8 613 aa13.33□□□□□ -0.28
HSPG2-211ENST00000486901 FRMD5Q7Z6J6 570 aa13.33□□□□□ -0.28
HSPG2-211ENST00000486901 PAGR1Q9BTK6 254 aa13.33□□□□□ -0.28
HSPG2-211ENST00000486901 TRIM6Q9C030 488 aaPredicted RBP13.33□□□□□ -0.28
HSPG2-211ENST00000486901 SERPINB13Q9UIV8 391 aa13.33□□□□□ -0.28
HSPG2-211ENST00000486901 PFASO15067 1338 aa13.33□□□□□ -0.28
HSPG2-211ENST00000486901 CNGA2Q16280 664 aa13.32□□□□□ -0.28
HSPG2-211ENST00000486901 FITM2Q8N6M3 262 aa13.32□□□□□ -0.28
HSPG2-211ENST00000486901 EIF2AK1Q9BQI3 630 aaKnown RBP13.32□□□□□ -0.28
HSPG2-211ENST00000486901 CDC42EP4Q9H3Q1 356 aaKnown RBP13.32□□□□□ -0.28
HSPG2-211ENST00000486901 USP20Q9Y2K6 914 aa13.32□□□□□ -0.28
HSPG2-211ENST00000486901 MYO3BQ8WXR4 1341 aa13.32□□□□□ -0.28
HSPG2-211ENST00000486901 KDM3AQ9Y4C1 1321 aa13.32□□□□□ -0.28
HSPG2-211ENST00000486901 C5orf60A6NFR6 353 aa13.32□□□□□ -0.28
HSPG2-211ENST00000486901 CYP26A1O43174 497 aa13.32□□□□□ -0.28
HSPG2-211ENST00000486901 RARAP10276 462 aa13.32□□□□□ -0.28
HSPG2-211ENST00000486901 EEF2P13639 858 aaKnown RBP13.32□□□□□ -0.28
HSPG2-211ENST00000486901 FERP16591 822 aa13.32□□□□□ -0.28
HSPG2-211ENST00000486901 RPL13P26373 211 aaKnown RBP13.32□□□□□ -0.28
HSPG2-211ENST00000486901 MMP13P45452 471 aa13.32□□□□□ -0.28
HSPG2-211ENST00000486901 PLCB4Q15147 1175 aa13.32□□□□□ -0.28
HSPG2-211ENST00000486901 ASPRV1Q53RT3 343 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms