RNA–Protein interactions for RNA: ENST00000486806.1

MCF2L-227, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-227ENST00000486806 MAP4K3Q8IVH8 894 aa10.55□□□□□ -0.72
MCF2L-227ENST00000486806 ADSSL1Q8N142 457 aa10.55□□□□□ -0.72
MCF2L-227ENST00000486806 GUF1Q8N442 669 aaKnown RBP10.55□□□□□ -0.72
MCF2L-227ENST00000486806 DEPTORQ8TB45 409 aa10.55□□□□□ -0.72
MCF2L-227ENST00000486806 CAGE1Q8TC20 777 aa10.55□□□□□ -0.72
MCF2L-227ENST00000486806 TMEM40Q8WWA1 233 aa10.55□□□□□ -0.72
MCF2L-227ENST00000486806 HVCN1Q96D96 273 aa10.55□□□□□ -0.72
MCF2L-227ENST00000486806 FDXACB1Q9BRP7 624 aaPredicted RBP10.55□□□□□ -0.72
MCF2L-227ENST00000486806 GZF1Q9H116 711 aaPredicted RBP10.55□□□□□ -0.72
MCF2L-227ENST00000486806 C2orf40Q9H1Z8 148 aa10.55□□□□□ -0.72
MCF2L-227ENST00000486806 TMEM134Q9H6X4 195 aa10.55□□□□□ -0.72
MCF2L-227ENST00000486806 MINDY3Q9H8M7 445 aa10.55□□□□□ -0.72
MCF2L-227ENST00000486806 ANO10Q9NW15 660 aa10.55□□□□□ -0.72
MCF2L-227ENST00000486806 TBX21Q9UL17 535 aa10.55□□□□□ -0.72
MCF2L-227ENST00000486806 TRPV2Q9Y5S1 764 aa10.55□□□□□ -0.72
MCF2L-227ENST00000486806 DNAH12Q6ZR08 3092 aa10.55□□□□□ -0.72
MCF2L-227ENST00000486806 SIP14410 1827 aa10.54□□□□□ -0.72
MCF2L-227ENST00000486806 DENND3A2RUS2 1198 aa10.54□□□□□ -0.72
MCF2L-227ENST00000486806 PPP1R3GB7ZBB8 358 aa10.54□□□□□ -0.72
MCF2L-227ENST00000486806 PITPNM1O00562 1244 aa10.54□□□□□ -0.72
MCF2L-227ENST00000486806 TLR3O15455 904 aaKnown RBP10.54□□□□□ -0.72
MCF2L-227ENST00000486806 CHRNA1P02708 482 aa10.54□□□□□ -0.72
MCF2L-227ENST00000486806 EDN1P05305 212 aa10.54□□□□□ -0.72
MCF2L-227ENST00000486806 CTSHP09668 335 aa10.54□□□□□ -0.72
MCF2L-227ENST00000486806 IQCF3P0C7M6 154 aa10.54□□□□□ -0.72
MCF2L-227ENST00000486806 SRGAP2CP0DJJ0 459 aa10.54□□□□□ -0.72
MCF2L-227ENST00000486806 CCDC192P0DO97 292 aa10.54□□□□□ -0.72
MCF2L-227ENST00000486806 CKBP12277 381 aa10.54□□□□□ -0.72
MCF2L-227ENST00000486806 DARSP14868 501 aaKnown RBP10.54□□□□□ -0.72
MCF2L-227ENST00000486806 ABCD1P33897 745 aa10.54□□□□□ -0.72
MCF2L-227ENST00000486806 THPOP40225 353 aa10.54□□□□□ -0.72
MCF2L-227ENST00000486806 PPP1R2P41236 205 aa10.54□□□□□ -0.72
MCF2L-227ENST00000486806 PRCPP42785 496 aa10.54□□□□□ -0.72
MCF2L-227ENST00000486806 EFNA5P52803 228 aa10.54□□□□□ -0.72
MCF2L-227ENST00000486806 CRYBB1P53674 252 aaPredicted RBP10.54□□□□□ -0.72
MCF2L-227ENST00000486806 TLE2Q04725 743 aa10.54□□□□□ -0.72
MCF2L-227ENST00000486806 KCNA1Q09470 495 aa10.54□□□□□ -0.72
MCF2L-227ENST00000486806 AMHR2Q16671 573 aa10.54□□□□□ -0.72
MCF2L-227ENST00000486806 FAM187BQ17R55 369 aa10.54□□□□□ -0.72
MCF2L-227ENST00000486806 LRSAM1Q6UWE0 723 aa10.54□□□□□ -0.72
MCF2L-227ENST00000486806 PPP4R3CPQ6ZMV5 832 aa10.54□□□□□ -0.72
MCF2L-227ENST00000486806 C11orf57Q6ZUT1 292 aaPredicted RBP10.54□□□□□ -0.72
MCF2L-227ENST00000486806 STXBP4Q6ZWJ1 553 aa10.54□□□□□ -0.72
MCF2L-227ENST00000486806 ZBTB8OSQ8IWT0 167 aa10.54□□□□□ -0.72
MCF2L-227ENST00000486806 MYOCDQ8IZQ8 938 aa10.54□□□□□ -0.72
MCF2L-227ENST00000486806 MLKLQ8NB16 471 aa10.54□□□□□ -0.72
MCF2L-227ENST00000486806 ZNF507Q8TCN5 953 aa10.54□□□□□ -0.72
MCF2L-227ENST00000486806 NLRP7Q8WX94 980 aa10.54□□□□□ -0.72
MCF2L-227ENST00000486806 ZNF668Q96K58 619 aaPredicted RBP10.54□□□□□ -0.72
MCF2L-227ENST00000486806 PPP1R16BQ96T49 567 aa10.54□□□□□ -0.72
MCF2L-227ENST00000486806 OSMRQ99650 979 aa10.54□□□□□ -0.72
MCF2L-227ENST00000486806 NOC4LQ9BVI4 516 aaKnown RBP10.54□□□□□ -0.72
MCF2L-227ENST00000486806 CELF4Q9BZC1 486 aaKnown RBP10.54□□□□□ -0.72
MCF2L-227ENST00000486806 KCTD10Q9H3F6 313 aa10.54□□□□□ -0.72
MCF2L-227ENST00000486806 FZD8Q9H461 694 aa10.54□□□□□ -0.72
MCF2L-227ENST00000486806 CDHR5Q9HBB8 845 aa10.54□□□□□ -0.72
MCF2L-227ENST00000486806 TBX20Q9UMR3 447 aa10.54□□□□□ -0.72
MCF2L-227ENST00000486806 PCDHB13Q9Y5F0 798 aa10.54□□□□□ -0.72
MCF2L-227ENST00000486806 CDY2AQ9Y6F7 541 aa10.54□□□□□ -0.72
MCF2L-227ENST00000486806 DCDC2CA8MYV0 355 aa10.53□□□□□ -0.72
MCF2L-227ENST00000486806 M0QZ92 97 aa10.53□□□□□ -0.72
MCF2L-227ENST00000486806 PRPF6O94906 941 aaKnown RBP10.53□□□□□ -0.72
MCF2L-227ENST00000486806 PIGRP01833 764 aa10.53□□□□□ -0.72
MCF2L-227ENST00000486806 EIF4BP23588 611 aaKnown RBP10.53□□□□□ -0.72
MCF2L-227ENST00000486806 ZCWPW2Q504Y3 356 aa10.53□□□□□ -0.72
MCF2L-227ENST00000486806 CT47A1Q5JQC4 288 aaPredicted RBP10.53□□□□□ -0.72
MCF2L-227ENST00000486806 ZNF618Q5T7W0 954 aa10.53□□□□□ -0.72
MCF2L-227ENST00000486806 FOXR2Q6PJQ5 311 aa10.53□□□□□ -0.72
MCF2L-227ENST00000486806 SRGAP1Q7Z6B7 1085 aa10.53□□□□□ -0.72
MCF2L-227ENST00000486806 CCDC155Q8N6L0 562 aa10.53□□□□□ -0.72
MCF2L-227ENST00000486806 PRIMPOLQ96LW4 560 aa10.53□□□□□ -0.72
MCF2L-227ENST00000486806 MED15Q96RN5 788 aa10.53□□□□□ -0.72
MCF2L-227ENST00000486806 GCOM2Q9BZD3 368 aaPredicted RBP10.53□□□□□ -0.72
MCF2L-227ENST00000486806 DNAJC25Q9H1X3 360 aa10.53□□□□□ -0.72
MCF2L-227ENST00000486806 DACH1Q9UI36 760 aa10.53□□□□□ -0.72
MCF2L-227ENST00000486806 MAPK8IP1Q9UQF2 711 aa10.53□□□□□ -0.72
MCF2L-227ENST00000486806 ATP11BQ9Y2G3 1177 aa10.53□□□□□ -0.72
MCF2L-227ENST00000486806 CNTNAP2Q9UHC6 1331 aa10.53□□□□□ -0.72
MCF2L-227ENST00000486806 ACKR2O00590 384 aa10.52□□□□□ -0.73
MCF2L-227ENST00000486806 PSMA7O14818 248 aa10.52□□□□□ -0.73
MCF2L-227ENST00000486806 TGFB1I1O43294 461 aa10.52□□□□□ -0.73
MCF2L-227ENST00000486806 TSPAN1O60635 241 aa10.52□□□□□ -0.73
MCF2L-227ENST00000486806 KIF20AO95235 890 aa10.52□□□□□ -0.73
MCF2L-227ENST00000486806 PRKCBP05771 671 aa10.52□□□□□ -0.73
MCF2L-227ENST00000486806 CLTBP09497 229 aa10.52□□□□□ -0.73
MCF2L-227ENST00000486806 SELPP16109 830 aa10.52□□□□□ -0.73
MCF2L-227ENST00000486806 PMS1P54277 932 aaKnown RBP10.52□□□□□ -0.73
MCF2L-227ENST00000486806 PAK1Q13153 545 aa10.52□□□□□ -0.73
MCF2L-227ENST00000486806 BFSP2Q13515 415 aa10.52□□□□□ -0.73
MCF2L-227ENST00000486806 STIM1Q13586 685 aa10.52□□□□□ -0.73
MCF2L-227ENST00000486806 MBTPS1Q14703 1052 aa10.52□□□□□ -0.73
MCF2L-227ENST00000486806 PCBP1Q15365 356 aaKnown RBP eCLIP10.52□□□□□ -0.73
MCF2L-227ENST00000486806 MAPK6Q16659 721 aa10.52□□□□□ -0.73
MCF2L-227ENST00000486806 KNOP1Q1ED39 458 aaKnown RBP10.52□□□□□ -0.73
MCF2L-227ENST00000486806 ANO6Q4KMQ2 910 aa10.52□□□□□ -0.73
MCF2L-227ENST00000486806 FBXO47Q5MNV8 452 aa10.52□□□□□ -0.73
MCF2L-227ENST00000486806 CENPPQ6IPU0 288 aa10.52□□□□□ -0.73
MCF2L-227ENST00000486806 SLC39A4Q6P5W5 647 aa10.52□□□□□ -0.73
MCF2L-227ENST00000486806 LRRC8DQ7L1W4 858 aa10.52□□□□□ -0.73
MCF2L-227ENST00000486806 FAM228AQ86W67 206 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms