RNA–Protein interactions for RNA: ENST00000486711.1

SMC4-218, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-218ENST00000486711 TRAF5O00463 557 aa6.2□□□□□ -1.42
SMC4-218ENST00000486711 GPR39O43194 453 aa6.2□□□□□ -1.42
SMC4-218ENST00000486711 FKBP9O95302 570 aa6.2□□□□□ -1.42
SMC4-218ENST00000486711 BPIP17213 487 aa6.2□□□□□ -1.42
SMC4-218ENST00000486711 KPNA1P52294 538 aaPredicted RBP6.2□□□□□ -1.42
SMC4-218ENST00000486711 TMPRSS15P98073 1019 aa6.2□□□□□ -1.42
SMC4-218ENST00000486711 DSG1Q02413 1049 aa6.2□□□□□ -1.42
SMC4-218ENST00000486711 ROM1Q03395 351 aa6.2□□□□□ -1.42
SMC4-218ENST00000486711 CRHR2Q13324 411 aa6.2□□□□□ -1.42
SMC4-218ENST00000486711 FKBP9P1Q75LS8 142 aa6.2□□□□□ -1.42
SMC4-218ENST00000486711 TMPRSS6Q8IU80 811 aa6.2□□□□□ -1.42
SMC4-218ENST00000486711 SMC1BQ8NDV3 1235 aa6.2□□□□□ -1.42
SMC4-218ENST00000486711 STAG1Q8WVM7 1258 aa6.2□□□□□ -1.42
SMC4-218ENST00000486711 NEU4Q8WWR8 484 aaPredicted RBP6.2□□□□□ -1.42
SMC4-218ENST00000486711 GPR101Q96P66 508 aaPredicted RBP6.2□□□□□ -1.42
SMC4-218ENST00000486711 SLC6A15Q9H2J7 730 aa6.2□□□□□ -1.42
SMC4-218ENST00000486711 THG1LQ9NWX6 298 aaKnown RBP6.2□□□□□ -1.42
SMC4-218ENST00000486711 SLC5A4Q9NY91 659 aa6.2□□□□□ -1.42
SMC4-218ENST00000486711 DENND2AQ9ULE3 1009 aa6.2□□□□□ -1.42
SMC4-218ENST00000486711 NEMP1O14524 444 aa6.19□□□□□ -1.42
SMC4-218ENST00000486711 KRT37O76014 449 aa6.19□□□□□ -1.42
SMC4-218ENST00000486711 PRLP01236 227 aa6.19□□□□□ -1.42
SMC4-218ENST00000486711 MAKP20794 623 aa6.19□□□□□ -1.42
SMC4-218ENST00000486711 LSSP48449 732 aa6.19□□□□□ -1.42
SMC4-218ENST00000486711 MECP2P51608 486 aaKnown RBP6.19□□□□□ -1.42
SMC4-218ENST00000486711 ADCY7P51828 1080 aa6.19□□□□□ -1.42
SMC4-218ENST00000486711 INHBCP55103 352 aa6.19□□□□□ -1.42
SMC4-218ENST00000486711 ATP2C1P98194 919 aaPredicted RBP6.19□□□□□ -1.42
SMC4-218ENST00000486711 SAFB2Q14151 953 aaKnown RBP eCLIP6.19□□□□□ -1.42
SMC4-218ENST00000486711 ZNF174Q15697 407 aa6.19□□□□□ -1.42
SMC4-218ENST00000486711 DGKDQ16760 1214 aa6.19□□□□□ -1.42
SMC4-218ENST00000486711 BRDTQ58F21 947 aaPredicted RBP6.19□□□□□ -1.42
SMC4-218ENST00000486711 SPTY2D1Q68D10 685 aaPredicted RBP6.19□□□□□ -1.42
SMC4-218ENST00000486711 PASD1Q8IV76 773 aa6.19□□□□□ -1.42
SMC4-218ENST00000486711 OR5AN1Q8NGI8 311 aa6.19□□□□□ -1.42
SMC4-218ENST00000486711 GCDHQ92947 438 aaPredicted RBP6.19□□□□□ -1.42
SMC4-218ENST00000486711 CEP72Q9P209 647 aa6.19□□□□□ -1.42
SMC4-218ENST00000486711 C11orf21Q9P2W6 132 aa6.19□□□□□ -1.42
SMC4-218ENST00000486711 ULK1O75385 1050 aa6.18□□□□□ -1.42
SMC4-218ENST00000486711 ADCYAP1R1P41586 468 aa6.18□□□□□ -1.42
SMC4-218ENST00000486711 KIF11P52732 1056 aa6.18□□□□□ -1.42
SMC4-218ENST00000486711 INHBEP58166 350 aa6.18□□□□□ -1.42
SMC4-218ENST00000486711 SLC6A3Q01959 620 aa6.18□□□□□ -1.42
SMC4-218ENST00000486711 RRP1BQ14684 758 aaKnown RBP6.18□□□□□ -1.42
SMC4-218ENST00000486711 ATP13A4Q4VNC1 1196 aa6.18□□□□□ -1.42
SMC4-218ENST00000486711 FNDC7Q5VTL7 733 aa6.18□□□□□ -1.42
SMC4-218ENST00000486711 IQSEC1Q6DN90 963 aa6.18□□□□□ -1.42
SMC4-218ENST00000486711 CHTF18Q8WVB6 975 aa6.18□□□□□ -1.42
SMC4-218ENST00000486711 MAML3Q96JK9 1138 aa6.18□□□□□ -1.42
SMC4-218ENST00000486711 PUS7LQ9H0K6 701 aaKnown RBP6.18□□□□□ -1.42
SMC4-218ENST00000486711 MMRN2Q9H8L6 949 aa6.18□□□□□ -1.42
SMC4-218ENST00000486711 ACSS2Q9NR19 701 aa6.18□□□□□ -1.42
SMC4-218ENST00000486711 KLHL42Q9P2K6 505 aa6.18□□□□□ -1.42
SMC4-218ENST00000486711 SH3BP1Q9Y3L3 701 aa6.18□□□□□ -1.42
SMC4-218ENST00000486711 WASHC2CQ9Y4E1 1318 aa6.18□□□□□ -1.42
SMC4-218ENST00000486711 PHLDB1Q86UU1 1377 aa6.18□□□□□ -1.42
SMC4-218ENST00000486711 UBA6A0AVT1 1052 aaPredicted RBP6.17□□□□□ -1.42
SMC4-218ENST00000486711 PEX11BO96011 259 aa6.17□□□□□ -1.42
SMC4-218ENST00000486711 ATP2A2P16615 1042 aaKnown RBP6.17□□□□□ -1.42
SMC4-218ENST00000486711 ID4P47928 161 aa6.17□□□□□ -1.42
SMC4-218ENST00000486711 RGS3P49796 1198 aa6.17□□□□□ -1.42
SMC4-218ENST00000486711 ITKQ08881 620 aa6.17□□□□□ -1.42
SMC4-218ENST00000486711 FAPQ12884 760 aa6.17□□□□□ -1.42
SMC4-218ENST00000486711 SMN1Q16637 294 aaKnown RBP6.17□□□□□ -1.42
SMC4-218ENST00000486711 ODR4Q5SWX8 454 aa6.17□□□□□ -1.42
SMC4-218ENST00000486711 SLFN12LQ6IEE8 588 aa6.17□□□□□ -1.42
SMC4-218ENST00000486711 MIEF2Q96C03 454 aa6.17□□□□□ -1.42
SMC4-218ENST00000486711 MTMR8Q96EF0 704 aa6.17□□□□□ -1.42
SMC4-218ENST00000486711 IKZF4Q9H2S9 585 aa6.17□□□□□ -1.42
SMC4-218ENST00000486711 PCIF1Q9H4Z3 704 aa6.17□□□□□ -1.42
SMC4-218ENST00000486711 MAGEL2Q9UJ55 1249 aa6.17□□□□□ -1.42
SMC4-218ENST00000486711 REXO2Q9Y3B8 237 aaKnown RBP6.17□□□□□ -1.42
SMC4-218ENST00000486711 RBM8AQ9Y5S9 174 aaKnown RBP6.17□□□□□ -1.42
SMC4-218ENST00000486711 KATNA1O75449 491 aa6.16□□□□□ -1.42
SMC4-218ENST00000486711 BPIFB4P59827 614 aa6.16□□□□□ -1.42
SMC4-218ENST00000486711 TCIRG1Q13488 830 aa6.16□□□□□ -1.42
SMC4-218ENST00000486711 GAGE13Q4V321 117 aa6.16□□□□□ -1.42
SMC4-218ENST00000486711 TTC38Q5R3I4 469 aa6.16□□□□□ -1.42
SMC4-218ENST00000486711 LHFPL2Q6ZUX7 228 aa6.16□□□□□ -1.42
SMC4-218ENST00000486711 EFHBQ8N7U6 833 aa6.16□□□□□ -1.42
SMC4-218ENST00000486711 ANKRD53Q8N9V6 530 aa6.16□□□□□ -1.42
SMC4-218ENST00000486711 RPL10LQ96L21 214 aaKnown RBP6.16□□□□□ -1.42
SMC4-218ENST00000486711 EMC7Q9NPA0 242 aa6.16□□□□□ -1.42
SMC4-218ENST00000486711 SPTLC3Q9NUV7 552 aa6.16□□□□□ -1.42
SMC4-218ENST00000486711 OXSMQ9NWU1 459 aa6.16□□□□□ -1.42
SMC4-218ENST00000486711 KCMF1Q9P0J7 381 aa6.16□□□□□ -1.42
SMC4-218ENST00000486711 HECAQ9UBI9 543 aaPredicted RBP6.16□□□□□ -1.42
SMC4-218ENST00000486711 A0A087X1B8 175 aa6.15□□□□□ -1.42
SMC4-218ENST00000486711 C2orf78A6NCI8 922 aa6.15□□□□□ -1.42
SMC4-218ENST00000486711 GOLGA8BA8MQT2 603 aa6.15□□□□□ -1.42
SMC4-218ENST00000486711 CYP17A1P05093 508 aa6.15□□□□□ -1.42
SMC4-218ENST00000486711 CNGB1Q14028 1251 aaPredicted RBP6.15□□□□□ -1.42
SMC4-218ENST00000486711 GAREM2Q75VX8 874 aa6.15□□□□□ -1.42
SMC4-218ENST00000486711 HDGFL2Q7Z4V5 671 aaPredicted RBP6.15□□□□□ -1.42
SMC4-218ENST00000486711 NME9Q86XW9 330 aa6.15□□□□□ -1.42
SMC4-218ENST00000486711 JDP2Q8WYK2 163 aa6.15□□□□□ -1.42
SMC4-218ENST00000486711 LARP4BQ92615 738 aaKnown RBP6.15□□□□□ -1.42
SMC4-218ENST00000486711 NKD2Q969F2 451 aaPredicted RBP6.15□□□□□ -1.42
SMC4-218ENST00000486711 GPHA2Q96T91 129 aa6.15□□□□□ -1.42
SMC4-218ENST00000486711 POLR3BQ9NW08 1133 aaPredicted RBP6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms