RNA–Protein interactions for RNA: ENST00000486254.3

PKP4-213, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-213ENST00000486254 CLMNQ96JQ2 1002 aa13.03□□□□□ -0.32
PKP4-213ENST00000486254 IFT74Q96LB3 600 aa13.03□□□□□ -0.32
PKP4-213ENST00000486254 KIAA1586Q9HCI6 787 aa13.03□□□□□ -0.32
PKP4-213ENST00000486254 POLD4Q9HCU8 107 aa13.03□□□□□ -0.32
PKP4-213ENST00000486254 KMT5AQ9NQR1 393 aa13.03□□□□□ -0.32
PKP4-213ENST00000486254 ZNF302Q9NR11 478 aa13.03□□□□□ -0.32
PKP4-213ENST00000486254 SAR1BQ9Y6B6 198 aa13.03□□□□□ -0.32
PKP4-213ENST00000486254 F8VZ95 297 aa13.03□□□□□ -0.32
PKP4-213ENST00000486254 SLC16A4O15374 487 aa13.03□□□□□ -0.32
PKP4-213ENST00000486254 GRIN3BO60391 1043 aa13.03□□□□□ -0.32
PKP4-213ENST00000486254 SOX5P35711 763 aa13.03□□□□□ -0.32
PKP4-213ENST00000486254 STAT1P42224 750 aa13.03□□□□□ -0.32
PKP4-213ENST00000486254 RBM10P98175 930 aaKnown RBP13.03□□□□□ -0.32
PKP4-213ENST00000486254 FAM160B1Q5W0V3 765 aa13.03□□□□□ -0.32
PKP4-213ENST00000486254 GPAT2Q6NUI2 795 aa13.03□□□□□ -0.32
PKP4-213ENST00000486254 ZNF572Q7Z3I7 529 aaPredicted RBP13.03□□□□□ -0.32
PKP4-213ENST00000486254 NCAPG2Q86XI2 1143 aa13.03□□□□□ -0.32
PKP4-213ENST00000486254 LMO3Q8TAP4 145 aa13.03□□□□□ -0.32
PKP4-213ENST00000486254 NOX5Q96PH1 765 aa13.03□□□□□ -0.32
PKP4-213ENST00000486254 CEP89Q96ST8 783 aa13.03□□□□□ -0.32
PKP4-213ENST00000486254 INTS2Q9H0H0 1204 aaKnown RBP13.03□□□□□ -0.32
PKP4-213ENST00000486254 GPRC5CQ9NQ84 441 aa13.03□□□□□ -0.32
PKP4-213ENST00000486254 TRIM10Q9UDY6 481 aa13.03□□□□□ -0.32
PKP4-213ENST00000486254 SEPT9Q9UHD8 586 aaPredicted RBP13.03□□□□□ -0.32
PKP4-213ENST00000486254 COQ4Q9Y3A0 265 aa13.03□□□□□ -0.32
PKP4-213ENST00000486254 PCDHGC5Q9Y5F6 944 aa13.03□□□□□ -0.32
PKP4-213ENST00000486254 STYXL1Q9Y6J8 313 aa13.03□□□□□ -0.32
PKP4-213ENST00000486254 MYH10P35580 1976 aa13.02□□□□□ -0.33
PKP4-213ENST00000486254 A0A0A6YYK5 440 aaPredicted RBP13.02□□□□□ -0.33
PKP4-213ENST00000486254 DENND3A2RUS2 1198 aa13.02□□□□□ -0.33
PKP4-213ENST00000486254 CTAGE15A4D2H0 777 aa13.02□□□□□ -0.33
PKP4-213ENST00000486254 LGR5O75473 907 aa13.02□□□□□ -0.33
PKP4-213ENST00000486254 CTAGE8P0CG41 777 aa13.02□□□□□ -0.33
PKP4-213ENST00000486254 TCP1P17987 556 aaKnown RBP13.02□□□□□ -0.33
PKP4-213ENST00000486254 CNGA1P29973 690 aa13.02□□□□□ -0.33
PKP4-213ENST00000486254 NAMPTP43490 491 aa13.02□□□□□ -0.33
PKP4-213ENST00000486254 SLC26A2P50443 739 aa13.02□□□□□ -0.33
PKP4-213ENST00000486254 SP2Q02086 613 aa13.02□□□□□ -0.33
PKP4-213ENST00000486254 EMC2Q15006 297 aa13.02□□□□□ -0.33
PKP4-213ENST00000486254 TARBP2Q15633 366 aaKnown RBP13.02□□□□□ -0.33
PKP4-213ENST00000486254 NAB2Q15742 525 aa13.02□□□□□ -0.33
PKP4-213ENST00000486254 CBWD6Q4V339 395 aa13.02□□□□□ -0.33
PKP4-213ENST00000486254 EPC2Q52LR7 807 aa13.02□□□□□ -0.33
PKP4-213ENST00000486254 CBWD3Q5JTY5 395 aa13.02□□□□□ -0.33
PKP4-213ENST00000486254 CBWD5Q5RIA9 395 aa13.02□□□□□ -0.33
PKP4-213ENST00000486254 IQCEQ6IPM2 695 aa13.02□□□□□ -0.33
PKP4-213ENST00000486254 CTAGE6Q86UF2 777 aa13.02□□□□□ -0.33
PKP4-213ENST00000486254 KSR1Q8IVT5 923 aa13.02□□□□□ -0.33
PKP4-213ENST00000486254 CTAGE4Q8IX94 777 aa13.02□□□□□ -0.33
PKP4-213ENST00000486254 MSANTD4Q8NCY6 345 aa13.02□□□□□ -0.33
PKP4-213ENST00000486254 LRRN4CLQ8ND94 238 aa13.02□□□□□ -0.33
PKP4-213ENST00000486254 UBE2Q2Q8WVN8 375 aa13.02□□□□□ -0.33
PKP4-213ENST00000486254 CBWD1Q9BRT8 395 aa13.02□□□□□ -0.33
PKP4-213ENST00000486254 PORCNQ9H237 461 aa13.02□□□□□ -0.33
PKP4-213ENST00000486254 RBPJLQ9UBG7 517 aa13.02□□□□□ -0.33
PKP4-213ENST00000486254 TMEM150BA6NC51 233 aa13.01□□□□□ -0.33
PKP4-213ENST00000486254 ATP8B1O43520 1251 aa13.01□□□□□ -0.33
PKP4-213ENST00000486254 ACTN1P12814 892 aa13.01□□□□□ -0.33
PKP4-213ENST00000486254 PTK2Q05397 1052 aa13.01□□□□□ -0.33
PKP4-213ENST00000486254 GFPT1Q06210 699 aaPredicted RBP13.01□□□□□ -0.33
PKP4-213ENST00000486254 KCTD2Q14681 263 aa13.01□□□□□ -0.33
PKP4-213ENST00000486254 NAA30Q147X3 362 aaPredicted RBP13.01□□□□□ -0.33
PKP4-213ENST00000486254 IFI16Q16666 785 aaKnown RBP13.01□□□□□ -0.33
PKP4-213ENST00000486254 FBXO38Q6PIJ6 1188 aa13.01□□□□□ -0.33
PKP4-213ENST00000486254 CYFIP1Q7L576 1253 aa13.01□□□□□ -0.33
PKP4-213ENST00000486254 ABRAQ8N0Z2 381 aa13.01□□□□□ -0.33
PKP4-213ENST00000486254 SEPT1Q8WYJ6 367 aa13.01□□□□□ -0.33
PKP4-213ENST00000486254 BSNDQ8WZ55 320 aa13.01□□□□□ -0.33
PKP4-213ENST00000486254 CALR3Q96L12 384 aaKnown RBP13.01□□□□□ -0.33
PKP4-213ENST00000486254 FAM81BQ96LP2 452 aa13.01□□□□□ -0.33
PKP4-213ENST00000486254 FGD4Q96M96 766 aa13.01□□□□□ -0.33
PKP4-213ENST00000486254 MFSD14AQ96MC6 490 aa13.01□□□□□ -0.33
PKP4-213ENST00000486254 SYT11Q9BT88 431 aa13.01□□□□□ -0.33
PKP4-213ENST00000486254 NRBP2Q9NSY0 501 aa13.01□□□□□ -0.33
PKP4-213ENST00000486254 RNF14Q9UBS8 474 aa13.01□□□□□ -0.33
PKP4-213ENST00000486254 EMSYQ7Z589 1322 aa13.01□□□□□ -0.33
PKP4-213ENST00000486254 ZNFX1Q9P2E3 1918 aaKnown RBP13.01□□□□□ -0.33
PKP4-213ENST00000486254 A0A087X0T9 212 aa13□□□□□ -0.33
PKP4-213ENST00000486254 GSTTP1A0A1W2PQM5 241 aa13□□□□□ -0.33
PKP4-213ENST00000486254 CCDC169A6NNP5 214 aa13□□□□□ -0.33
PKP4-213ENST00000486254 FAM228BP0C875 321 aa13□□□□□ -0.33
PKP4-213ENST00000486254 ATP4AP20648 1035 aa13□□□□□ -0.33
PKP4-213ENST00000486254 ADSSP30520 456 aa13□□□□□ -0.33
PKP4-213ENST00000486254 ARL2P36404 184 aa13□□□□□ -0.33
PKP4-213ENST00000486254 MXI1P50539 228 aa13□□□□□ -0.33
PKP4-213ENST00000486254 POLGP54098 1239 aaPredicted RBP13□□□□□ -0.33
PKP4-213ENST00000486254 CCNA1P78396 465 aa13□□□□□ -0.33
PKP4-213ENST00000486254 TTLL12Q14166 644 aaPredicted RBP13□□□□□ -0.33
PKP4-213ENST00000486254 KIF22Q14807 665 aa13□□□□□ -0.33
PKP4-213ENST00000486254 SNRNP35Q16560 246 aaKnown RBP13□□□□□ -0.33
PKP4-213ENST00000486254 C1orf220Q5T0J3 134 aa13□□□□□ -0.33
PKP4-213ENST00000486254 MAEAQ7L5Y9 396 aa13□□□□□ -0.33
PKP4-213ENST00000486254 ZNF571Q7Z3V5 609 aaPredicted RBP13□□□□□ -0.33
PKP4-213ENST00000486254 SLC7A3Q8WY07 619 aa13□□□□□ -0.33
PKP4-213ENST00000486254 RUBCNQ92622 972 aa13□□□□□ -0.33
PKP4-213ENST00000486254 PAGR1Q9BTK6 254 aa13□□□□□ -0.33
PKP4-213ENST00000486254 CCDC94Q9BW85 323 aaPredicted RBP13□□□□□ -0.33
PKP4-213ENST00000486254 POLR3FQ9H1D9 316 aaPredicted RBP13□□□□□ -0.33
PKP4-213ENST00000486254 IKZF4Q9H2S9 585 aa13□□□□□ -0.33
PKP4-213ENST00000486254 TMEM134Q9H6X4 195 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms