RNA–Protein interactions for RNA: ENST00000485870.1

COL1A1-206, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 403 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-206ENST00000485870 EOMESO95936 686 aa20.44■□□□□ 0.86
COL1A1-206ENST00000485870 TIGD5Q53EQ6 642 aa20.44■□□□□ 0.86
COL1A1-206ENST00000485870 KLHL23Q8NBE8 558 aa20.44■□□□□ 0.86
COL1A1-206ENST00000485870 HELQQ8TDG4 1101 aa20.44■□□□□ 0.86
COL1A1-206ENST00000485870 LPPQ93052 612 aa20.44■□□□□ 0.86
COL1A1-206ENST00000485870 P2RX5Q93086 422 aa20.44■□□□□ 0.86
COL1A1-206ENST00000485870 BHMT2Q9H2M3 363 aa20.44■□□□□ 0.86
COL1A1-206ENST00000485870 FAM105AQ9NUU6 356 aa20.44■□□□□ 0.86
COL1A1-206ENST00000485870 PLAGL2Q9UPG8 496 aa20.44■□□□□ 0.86
COL1A1-206ENST00000485870 ATG2AQ2TAZ0 1938 aa20.43■□□□□ 0.86
COL1A1-206ENST00000485870 XIRP2A4UGR9 3374 aa20.43■□□□□ 0.86
COL1A1-206ENST00000485870 VWA3AA6NCI4 1184 aa20.43■□□□□ 0.86
COL1A1-206ENST00000485870 LRRIQ4A6NIV6 560 aa20.43■□□□□ 0.86
COL1A1-206ENST00000485870 ITGB1P05556 798 aa20.43■□□□□ 0.86
COL1A1-206ENST00000485870 SKIP12755 728 aa20.43■□□□□ 0.86
COL1A1-206ENST00000485870 HOXA11P31270 313 aaPredicted RBP20.43■□□□□ 0.86
COL1A1-206ENST00000485870 TFF2Q03403 129 aa20.43■□□□□ 0.86
COL1A1-206ENST00000485870 ZRSR1Q15695 479 aaKnown RBP20.43■□□□□ 0.86
COL1A1-206ENST00000485870 ATXN2LQ8WWM7 1075 aaKnown RBP20.43■□□□□ 0.86
COL1A1-206ENST00000485870 INTS4Q96HW7 963 aaKnown RBP20.43■□□□□ 0.86
COL1A1-206ENST00000485870 TRAIPQ9BWF2 469 aa20.43■□□□□ 0.86
COL1A1-206ENST00000485870 LMAN2LQ9H0V9 348 aa20.43■□□□□ 0.86
COL1A1-206ENST00000485870 CWH43Q9H720 699 aa20.43■□□□□ 0.86
COL1A1-206ENST00000485870 AAASQ9NRG9 546 aa20.43■□□□□ 0.86
COL1A1-206ENST00000485870 PCDHB12Q9Y5F1 795 aa20.43■□□□□ 0.86
COL1A1-206ENST00000485870 TSPAN1O60635 241 aa20.42■□□□□ 0.86
COL1A1-206ENST00000485870 CYP11B2P19099 503 aa20.42■□□□□ 0.86
COL1A1-206ENST00000485870 SYT1P21579 422 aa20.42■□□□□ 0.86
COL1A1-206ENST00000485870 RAB27AP51159 221 aa20.42■□□□□ 0.86
COL1A1-206ENST00000485870 MRPS5P82675 430 aaKnown RBP20.42■□□□□ 0.86
COL1A1-206ENST00000485870 MBTD1Q05BQ5 628 aa20.42■□□□□ 0.86
COL1A1-206ENST00000485870 POU5F1BQ06416 359 aa20.42■□□□□ 0.86
COL1A1-206ENST00000485870 NAALADL2Q58DX5 795 aa20.42■□□□□ 0.86
COL1A1-206ENST00000485870 TCEAL5Q5H9L2 206 aa20.42■□□□□ 0.86
COL1A1-206ENST00000485870 LRRC55Q6ZSA7 311 aa20.42■□□□□ 0.86
COL1A1-206ENST00000485870 IFNLR1Q8IU57 520 aaPredicted RBP20.42■□□□□ 0.86
COL1A1-206ENST00000485870 LRRC43Q8N309 656 aa20.42■□□□□ 0.86
COL1A1-206ENST00000485870 COLGALT1Q8NBJ5 622 aa20.42■□□□□ 0.86
COL1A1-206ENST00000485870 MMTAG2Q9BU76 263 aaKnown RBP20.42■□□□□ 0.86
COL1A1-206ENST00000485870 PCDHB2Q9Y5E7 798 aa20.42■□□□□ 0.86
COL1A1-206ENST00000485870 MEIS3P2A8K0S8 358 aa20.41■□□□□ 0.86
COL1A1-206ENST00000485870 E9PMD0 336 aa20.41■□□□□ 0.86
COL1A1-206ENST00000485870 DLL1O00548 723 aa20.41■□□□□ 0.86
COL1A1-206ENST00000485870 LAG3P18627 525 aa20.41■□□□□ 0.86
COL1A1-206ENST00000485870 DNAJB1P25685 340 aa20.41■□□□□ 0.86
COL1A1-206ENST00000485870 TJAP1Q5JTD0 557 aa20.41■□□□□ 0.86
COL1A1-206ENST00000485870 ARL6IP4Q66PJ3 421 aaKnown RBP20.41■□□□□ 0.86
COL1A1-206ENST00000485870 THNSL1Q8IYQ7 743 aa20.41■□□□□ 0.86
COL1A1-206ENST00000485870 SPPL3Q8TCT6 385 aa20.41■□□□□ 0.86
COL1A1-206ENST00000485870 HLA-CQ95604 372 aa20.41■□□□□ 0.86
COL1A1-206ENST00000485870 CPB2Q96IY4 423 aa20.41■□□□□ 0.86
COL1A1-206ENST00000485870 ASB2Q96Q27 587 aa20.41■□□□□ 0.86
COL1A1-206ENST00000485870 NSUN3Q9H649 340 aaKnown RBP20.41■□□□□ 0.86
COL1A1-206ENST00000485870 POLD4Q9HCU8 107 aa20.41■□□□□ 0.86
COL1A1-206ENST00000485870 COG5Q9UP83 839 aa20.41■□□□□ 0.86
COL1A1-206ENST00000485870 DNM3Q9UQ16 869 aa20.41■□□□□ 0.86
COL1A1-206ENST00000485870 PLXNA4Q9HCM2 1894 aa20.41■□□□□ 0.86
COL1A1-206ENST00000485870 EYA4O95677 639 aa20.4■□□□□ 0.86
COL1A1-206ENST00000485870 PCBP1Q15365 356 aaKnown RBP eCLIP20.4■□□□□ 0.86
COL1A1-206ENST00000485870 AMHR2Q16671 573 aa20.4■□□□□ 0.86
COL1A1-206ENST00000485870 UBXN11Q5T124 520 aa20.4■□□□□ 0.86
COL1A1-206ENST00000485870 KCNK18Q7Z418 384 aa20.4■□□□□ 0.86
COL1A1-206ENST00000485870 POF1BQ8WVV4 589 aa20.4■□□□□ 0.86
COL1A1-206ENST00000485870 BSNDQ8WZ55 320 aa20.4■□□□□ 0.86
COL1A1-206ENST00000485870 SNX21Q969T3 373 aa20.4■□□□□ 0.86
COL1A1-206ENST00000485870 COL25A1Q9BXS0 654 aaPredicted RBP20.4■□□□□ 0.86
COL1A1-206ENST00000485870 NFKBIZQ9BYH8 718 aa20.4■□□□□ 0.86
COL1A1-206ENST00000485870 INPP5FQ9Y2H2 1132 aa20.4■□□□□ 0.86
COL1A1-206ENST00000485870 TTC28Q96AY4 2481 aa20.39■□□□□ 0.86
COL1A1-206ENST00000485870 B4GALT5O43286 388 aa20.39■□□□□ 0.85
COL1A1-206ENST00000485870 ZNF623O75123 536 aa20.39■□□□□ 0.85
COL1A1-206ENST00000485870 FGF18O76093 207 aa20.39■□□□□ 0.85
COL1A1-206ENST00000485870 AXLP30530 894 aa20.39■□□□□ 0.85
COL1A1-206ENST00000485870 PBX3P40426 434 aa20.39■□□□□ 0.85
COL1A1-206ENST00000485870 NCBP1Q09161 790 aaKnown RBP20.39■□□□□ 0.85
COL1A1-206ENST00000485870 RESTQ13127 1097 aa20.39■□□□□ 0.85
COL1A1-206ENST00000485870 CAMK1Q14012 370 aa20.39■□□□□ 0.85
COL1A1-206ENST00000485870 SF3A1Q15459 793 aaKnown RBP20.39■□□□□ 0.85
COL1A1-206ENST00000485870 NOTUMQ6P988 496 aa20.39■□□□□ 0.85
COL1A1-206ENST00000485870 GLB1LQ6UWU2 654 aa20.39■□□□□ 0.85
COL1A1-206ENST00000485870 HSCBQ8IWL3 235 aa20.39■□□□□ 0.85
COL1A1-206ENST00000485870 PGBD4Q96DM1 585 aa20.39■□□□□ 0.85
COL1A1-206ENST00000485870 PLIN2Q99541 437 aa20.39■□□□□ 0.85
COL1A1-206ENST00000485870 EIF2AQ9BY44 585 aaKnown RBP20.39■□□□□ 0.85
COL1A1-206ENST00000485870 MRPL9Q9BYD2 267 aaKnown RBP20.39■□□□□ 0.85
COL1A1-206ENST00000485870 BMP15O95972 392 aa20.38■□□□□ 0.85
COL1A1-206ENST00000485870 ARF4P18085 180 aaPredicted RBP20.38■□□□□ 0.85
COL1A1-206ENST00000485870 CSPP1Q1MSJ5 1256 aa20.38■□□□□ 0.85
COL1A1-206ENST00000485870 CDCA2Q69YH5 1023 aaPredicted RBP20.38■□□□□ 0.85
COL1A1-206ENST00000485870 KCNT2Q6UVM3 1135 aa20.38■□□□□ 0.85
COL1A1-206ENST00000485870 ZBTB8OSQ8IWT0 167 aa20.38■□□□□ 0.85
COL1A1-206ENST00000485870 CDK5RAP3Q96JB5 506 aa20.38■□□□□ 0.85
COL1A1-206ENST00000485870 ZNF558Q96NG5 402 aa20.38■□□□□ 0.85
COL1A1-206ENST00000485870 PNMA5Q96PV4 448 aa20.38■□□□□ 0.85
COL1A1-206ENST00000485870 UBE2ZQ9H832 354 aaPredicted RBP20.38■□□□□ 0.85
COL1A1-206ENST00000485870 OFD1O75665 1012 aa20.37■□□□□ 0.85
COL1A1-206ENST00000485870 LIG1P18858 919 aa20.37■□□□□ 0.85
COL1A1-206ENST00000485870 IRS1P35568 1242 aa20.37■□□□□ 0.85
COL1A1-206ENST00000485870 NAMPTP43490 491 aa20.37■□□□□ 0.85
COL1A1-206ENST00000485870 KCNQ1P51787 676 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms