RNA–Protein interactions for RNA: ENST00000485810.1

PRPF38B-205, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 2

Gene PRPF38B, Length 1,352 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-205ENST00000485810 LDHDQ86WU2 507 aa4.56□□□□□ -1.68
PRPF38B-205ENST00000485810 DGKHQ86XP1 1220 aa4.56□□□□□ -1.68
PRPF38B-205ENST00000485810 NME9Q86XW9 330 aa4.56□□□□□ -1.68
PRPF38B-205ENST00000485810 ZFPM2Q8WW38 1151 aa4.56□□□□□ -1.68
PRPF38B-205ENST00000485810 TBC1D20Q96BZ9 403 aa4.56□□□□□ -1.68
PRPF38B-205ENST00000485810 TRMT2BQ96GJ1 504 aaKnown RBP4.56□□□□□ -1.68
PRPF38B-205ENST00000485810 PPP1R9BQ96SB3 815 aa4.56□□□□□ -1.68
PRPF38B-205ENST00000485810 AP1M1Q9BXS5 423 aa4.56□□□□□ -1.68
PRPF38B-205ENST00000485810 KANSL2Q9H9L4 492 aa4.56□□□□□ -1.68
PRPF38B-205ENST00000485810 GRPEL1Q9HAV7 217 aa4.56□□□□□ -1.68
PRPF38B-205ENST00000485810 RRAGDQ9NQL2 400 aaPredicted RBP4.56□□□□□ -1.68
PRPF38B-205ENST00000485810 TMEM260Q9NX78 707 aa4.56□□□□□ -1.68
PRPF38B-205ENST00000485810 UTP6Q9NYH9 597 aaKnown RBP4.56□□□□□ -1.68
PRPF38B-205ENST00000485810 GPR55Q9Y2T6 319 aaPredicted RBP4.56□□□□□ -1.68
PRPF38B-205ENST00000485810 TTLL3Q9Y4R7 772 aa4.56□□□□□ -1.68
PRPF38B-205ENST00000485810 AFG3L2Q9Y4W6 797 aa4.56□□□□□ -1.68
PRPF38B-205ENST00000485810 DIP2AQ14689 1571 aa4.56□□□□□ -1.68
PRPF38B-205ENST00000485810 SETD1BQ9UPS6 1966 aaKnown RBP4.56□□□□□ -1.68
PRPF38B-205ENST00000485810 E2F8A0AVK6 867 aa4.55□□□□□ -1.68
PRPF38B-205ENST00000485810 FADS2P1A8MWK0 482 aa4.55□□□□□ -1.68
PRPF38B-205ENST00000485810 H0Y8X5 98 aa4.55□□□□□ -1.68
PRPF38B-205ENST00000485810 PRICKLE3O43900 615 aaPredicted RBP4.55□□□□□ -1.68
PRPF38B-205ENST00000485810 BAIAP3O94812 1187 aa4.55□□□□□ -1.68
PRPF38B-205ENST00000485810 BAG4O95429 457 aaKnown RBP4.55□□□□□ -1.68
PRPF38B-205ENST00000485810 HMOX1P09601 288 aa4.55□□□□□ -1.68
PRPF38B-205ENST00000485810 VAV1P15498 845 aa4.55□□□□□ -1.68
PRPF38B-205ENST00000485810 TNFAIP3P21580 790 aa4.55□□□□□ -1.68
PRPF38B-205ENST00000485810 TRPC1P48995 793 aa4.55□□□□□ -1.68
PRPF38B-205ENST00000485810 MCM2P49736 904 aa4.55□□□□□ -1.68
PRPF38B-205ENST00000485810 CCT4P50991 539 aaKnown RBP4.55□□□□□ -1.68
PRPF38B-205ENST00000485810 NEK3P51956 506 aa4.55□□□□□ -1.68
PRPF38B-205ENST00000485810 RTP1P59025 263 aa4.55□□□□□ -1.68
PRPF38B-205ENST00000485810 STK3Q13188 491 aa4.55□□□□□ -1.68
PRPF38B-205ENST00000485810 EIF4A2Q14240 407 aaKnown RBP4.55□□□□□ -1.68
PRPF38B-205ENST00000485810 TCEA2Q15560 299 aa4.55□□□□□ -1.68
PRPF38B-205ENST00000485810 PTPN14Q15678 1187 aa4.55□□□□□ -1.68
PRPF38B-205ENST00000485810 PARP10Q53GL7 1025 aa4.55□□□□□ -1.68
PRPF38B-205ENST00000485810 HS1BP3Q53T59 392 aa4.55□□□□□ -1.68
PRPF38B-205ENST00000485810 WWC2Q6AWC2 1192 aa4.55□□□□□ -1.68
PRPF38B-205ENST00000485810 ISM2Q6H9L7 571 aa4.55□□□□□ -1.68
PRPF38B-205ENST00000485810 CNKSR3Q6P9H4 555 aa4.55□□□□□ -1.68
PRPF38B-205ENST00000485810 LSRQ86X29 649 aaPredicted RBP4.55□□□□□ -1.68
PRPF38B-205ENST00000485810 ERC1Q8IUD2 1116 aa4.55□□□□□ -1.68
PRPF38B-205ENST00000485810 IQCF2Q8IXL9 164 aa4.55□□□□□ -1.68
PRPF38B-205ENST00000485810 C7orf61Q8IZ16 206 aa4.55□□□□□ -1.68
PRPF38B-205ENST00000485810 LILRB2Q8N423 598 aa4.55□□□□□ -1.68
PRPF38B-205ENST00000485810 TEX9Q8N6V9 391 aa4.55□□□□□ -1.68
PRPF38B-205ENST00000485810 MIGA1Q8NAN2 632 aa4.55□□□□□ -1.68
PRPF38B-205ENST00000485810 TMEM52Q8NDY8 209 aa4.55□□□□□ -1.68
PRPF38B-205ENST00000485810 APPL2Q8NEU8 664 aa4.55□□□□□ -1.68
PRPF38B-205ENST00000485810 AFAP1L1Q8TED9 768 aa4.55□□□□□ -1.68
PRPF38B-205ENST00000485810 SEC16BQ96JE7 1060 aa4.55□□□□□ -1.68
PRPF38B-205ENST00000485810 TEPSINQ96N21 525 aa4.55□□□□□ -1.68
PRPF38B-205ENST00000485810 DNAJC7Q99615 494 aa4.55□□□□□ -1.68
PRPF38B-205ENST00000485810 THUMPD2Q9BTF0 503 aaKnown RBP4.55□□□□□ -1.68
PRPF38B-205ENST00000485810 DSCC1Q9BVC3 393 aa4.55□□□□□ -1.68
PRPF38B-205ENST00000485810 LUC7LQ9NQ29 371 aaKnown RBP4.55□□□□□ -1.68
PRPF38B-205ENST00000485810 DIAPH3Q9NSV4 1193 aa4.55□□□□□ -1.68
PRPF38B-205ENST00000485810 COMMD8Q9NX08 183 aa4.55□□□□□ -1.68
PRPF38B-205ENST00000485810 DCAF16Q9NXF7 216 aa4.55□□□□□ -1.68
PRPF38B-205ENST00000485810 PCDHB10Q9UN67 800 aa4.55□□□□□ -1.68
PRPF38B-205ENST00000485810 EFR3BQ9Y2G0 817 aa4.55□□□□□ -1.68
PRPF38B-205ENST00000485810 PCDHA5Q9Y5H7 936 aa4.55□□□□□ -1.68
PRPF38B-205ENST00000485810 SNX5Q9Y5X3 404 aa4.55□□□□□ -1.68
PRPF38B-205ENST00000485810 MORC2Q9Y6X9 1032 aaPredicted RBP4.55□□□□□ -1.68
PRPF38B-205ENST00000485810 PXDNLA1KZ92 1463 aa4.55□□□□□ -1.68
PRPF38B-205ENST00000485810 USP54Q70EL1 1684 aa4.55□□□□□ -1.68
PRPF38B-205ENST00000485810 ITSN1Q15811 1721 aa4.55□□□□□ -1.68
PRPF38B-205ENST00000485810 SALL3Q9BXA9 1300 aa4.55□□□□□ -1.68
PRPF38B-205ENST00000485810 LTBP3Q9NS15 1303 aa4.55□□□□□ -1.68
PRPF38B-205ENST00000485810 SBNO1A3KN83 1393 aa4.55□□□□□ -1.68
PRPF38B-205ENST00000485810 TNRQ92752 1358 aa4.55□□□□□ -1.68
PRPF38B-205ENST00000485810 LRRC37A3O60309 1634 aa4.55□□□□□ -1.68
PRPF38B-205ENST00000485810 ANKARQ7Z5J8 1434 aa4.55□□□□□ -1.68
PRPF38B-205ENST00000485810 ARHGAP23Q9P227 1491 aa4.54□□□□□ -1.68
PRPF38B-205ENST00000485810 UBR1Q8IWV7 1749 aa4.54□□□□□ -1.68
PRPF38B-205ENST00000485810 TMEM110-MUSTN1A8MSY1 372 aa4.54□□□□□ -1.68
PRPF38B-205ENST00000485810 K7ENM7 598 aa4.54□□□□□ -1.68
PRPF38B-205ENST00000485810 FFAR3O14843 346 aa4.54□□□□□ -1.68
PRPF38B-205ENST00000485810 KCNQ2O43526 872 aa4.54□□□□□ -1.68
PRPF38B-205ENST00000485810 AKAP10O43572 662 aa4.54□□□□□ -1.68
PRPF38B-205ENST00000485810 RHOBTB3O94955 611 aa4.54□□□□□ -1.68
PRPF38B-205ENST00000485810 REC8O95072 547 aa4.54□□□□□ -1.68
PRPF38B-205ENST00000485810 GSTM1P09488 218 aa4.54□□□□□ -1.68
PRPF38B-205ENST00000485810 GYS1P13807 737 aa4.54□□□□□ -1.68
PRPF38B-205ENST00000485810 FBLN1P23142 703 aa4.54□□□□□ -1.68
PRPF38B-205ENST00000485810 ADD2P35612 726 aa4.54□□□□□ -1.68
PRPF38B-205ENST00000485810 SOX5P35711 763 aa4.54□□□□□ -1.68
PRPF38B-205ENST00000485810 CCT5P48643 541 aa4.54□□□□□ -1.68
PRPF38B-205ENST00000485810 GUCY2FP51841 1108 aa4.54□□□□□ -1.68
PRPF38B-205ENST00000485810 NEK2P51955 445 aa4.54□□□□□ -1.68
PRPF38B-205ENST00000485810 PMS1P54277 932 aaKnown RBP4.54□□□□□ -1.68
PRPF38B-205ENST00000485810 PLIN5Q00G26 463 aa4.54□□□□□ -1.68
PRPF38B-205ENST00000485810 CCDC173Q0VFZ6 552 aa4.54□□□□□ -1.68
PRPF38B-205ENST00000485810 TBX2Q13207 712 aaPredicted RBP4.54□□□□□ -1.68
PRPF38B-205ENST00000485810 SLC9A5Q14940 896 aa4.54□□□□□ -1.68
PRPF38B-205ENST00000485810 SEPT7Q16181 437 aaKnown RBP4.54□□□□□ -1.68
PRPF38B-205ENST00000485810 ZXDCQ2QGD7 858 aaPredicted RBP4.54□□□□□ -1.68
PRPF38B-205ENST00000485810 TKFCQ3LXA3 575 aa4.54□□□□□ -1.68
PRPF38B-205ENST00000485810 SPATS1Q496A3 300 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms