RNA–Protein interactions for RNA: ENST00000485612.5

SSR4-210, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 701 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-210ENST00000485612 ZNF484Q5JVG2 852 aa13.8□□□□□ -0.2
SSR4-210ENST00000485612 NETO1Q8TDF5 533 aa13.8□□□□□ -0.2
SSR4-210ENST00000485612 SDF4Q9BRK5 362 aa13.8□□□□□ -0.2
SSR4-210ENST00000485612 PARD6AQ9NPB6 346 aa13.8□□□□□ -0.2
SSR4-210ENST00000485612 SLC2A4RGQ9NR83 387 aa13.8□□□□□ -0.2
SSR4-210ENST00000485612 FAM217BQ9NTX9 383 aaPredicted RBP13.8□□□□□ -0.2
SSR4-210ENST00000485612 V9GY48 417 aaPredicted RBP13.8□□□□□ -0.2
SSR4-210ENST00000485612 GPR179Q6PRD1 2367 aa13.8□□□□□ -0.2
SSR4-210ENST00000485612 A0A0U1RQF3 1178 aa13.79□□□□□ -0.2
SSR4-210ENST00000485612 CARNS1A5YM72 827 aa13.79□□□□□ -0.2
SSR4-210ENST00000485612 SMCO2A6NFE2 343 aa13.79□□□□□ -0.2
SSR4-210ENST00000485612 GOLGA8AA7E2F4 631 aa13.79□□□□□ -0.2
SSR4-210ENST00000485612 GOLGA8BA8MQT2 603 aa13.79□□□□□ -0.2
SSR4-210ENST00000485612 ZBTB43O43298 467 aa13.79□□□□□ -0.2
SSR4-210ENST00000485612 CNPP09543 421 aaKnown RBP13.79□□□□□ -0.2
SSR4-210ENST00000485612 CPA1P15085 419 aa13.79□□□□□ -0.2
SSR4-210ENST00000485612 SREBF1P36956 1147 aa13.79□□□□□ -0.2
SSR4-210ENST00000485612 CLK2P49760 499 aaKnown RBP13.79□□□□□ -0.2
SSR4-210ENST00000485612 CEP55Q53EZ4 464 aa13.79□□□□□ -0.2
SSR4-210ENST00000485612 PPP1R18Q6NYC8 613 aa13.79□□□□□ -0.2
SSR4-210ENST00000485612 CYP26C1Q6V0L0 522 aa13.79□□□□□ -0.2
SSR4-210ENST00000485612 SYNE3Q6ZMZ3 975 aa13.79□□□□□ -0.2
SSR4-210ENST00000485612 ZNF598Q86UK7 904 aaKnown RBP13.79□□□□□ -0.2
SSR4-210ENST00000485612 CCDC60Q8IWA6 550 aaPredicted RBP13.79□□□□□ -0.2
SSR4-210ENST00000485612 METTL13Q8N6R0 699 aa13.79□□□□□ -0.2
SSR4-210ENST00000485612 RBM28Q9NW13 759 aaKnown RBP13.79□□□□□ -0.2
SSR4-210ENST00000485612 ANGPTL2Q9UKU9 493 aa13.79□□□□□ -0.2
SSR4-210ENST00000485612 CLUHO75153 1309 aa13.79□□□□□ -0.2
SSR4-210ENST00000485612 CACNA1IQ9P0X4 2223 aa13.79□□□□□ -0.2
SSR4-210ENST00000485612 CHD8Q9HCK8 2581 aa13.78□□□□□ -0.2
SSR4-210ENST00000485612 USP24Q9UPU5 2620 aa13.78□□□□□ -0.2
SSR4-210ENST00000485612 ARID2Q68CP9 1835 aa13.78□□□□□ -0.2
SSR4-210ENST00000485612 IGKV6D-21A0A0A0MT36 114 aa13.78□□□□□ -0.2
SSR4-210ENST00000485612 KLF18A0A0U1RQI7 1052 aa13.78□□□□□ -0.2
SSR4-210ENST00000485612 KANSL1LA0AUZ9 987 aa13.78□□□□□ -0.2
SSR4-210ENST00000485612 FAM86B1E9PN63 330 aa13.78□□□□□ -0.2
SSR4-210ENST00000485612 MEIS1O00470 390 aa13.78□□□□□ -0.2
SSR4-210ENST00000485612 ATG7O95352 703 aa13.78□□□□□ -0.2
SSR4-210ENST00000485612 SSBP05455 408 aaKnown RBP eCLIP13.78□□□□□ -0.2
SSR4-210ENST00000485612 GALTP07902 379 aa13.78□□□□□ -0.2
SSR4-210ENST00000485612 FAM86B2P0C5J1 330 aa13.78□□□□□ -0.2
SSR4-210ENST00000485612 SPEM2Q0P670 501 aa13.78□□□□□ -0.2
SSR4-210ENST00000485612 JAKMIP3Q5VZ66 844 aa13.78□□□□□ -0.2
SSR4-210ENST00000485612 ABHD15Q6UXT9 468 aa13.78□□□□□ -0.2
SSR4-210ENST00000485612 BCL7CQ8WUZ0 217 aaPredicted RBP13.78□□□□□ -0.2
SSR4-210ENST00000485612 BBXQ8WY36 941 aaPredicted RBP13.78□□□□□ -0.2
SSR4-210ENST00000485612 MAN1C1Q9NR34 630 aa13.78□□□□□ -0.2
SSR4-210ENST00000485612 BARHL2Q9NY43 387 aa13.78□□□□□ -0.2
SSR4-210ENST00000485612 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.78□□□□□ -0.2
SSR4-210ENST00000485612 COL1A2P08123 1366 aa13.78□□□□□ -0.2
SSR4-210ENST00000485612 IGLV3-22A0A075B6J6 115 aa13.77□□□□□ -0.21
SSR4-210ENST00000485612 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.77□□□□□ -0.21
SSR4-210ENST00000485612 ZBTB42B2RXF5 422 aa13.77□□□□□ -0.21
SSR4-210ENST00000485612 ANHXE9PGG2 379 aa13.77□□□□□ -0.21
SSR4-210ENST00000485612 BACH1O14867 736 aa13.77□□□□□ -0.21
SSR4-210ENST00000485612 INPPL1O15357 1258 aa13.77□□□□□ -0.21
SSR4-210ENST00000485612 DHX15O43143 795 aaKnown RBP13.77□□□□□ -0.21
SSR4-210ENST00000485612 FOSP01100 380 aaPredicted RBP13.77□□□□□ -0.21
SSR4-210ENST00000485612 LAMP2P13473 410 aa13.77□□□□□ -0.21
SSR4-210ENST00000485612 ATP4AP20648 1035 aa13.77□□□□□ -0.21
SSR4-210ENST00000485612 NLRP11P59045 1033 aaKnown RBP13.77□□□□□ -0.21
SSR4-210ENST00000485612 SNW1Q13573 536 aaKnown RBP13.77□□□□□ -0.21
SSR4-210ENST00000485612 UBXN2BQ14CS0 331 aa13.77□□□□□ -0.21
SSR4-210ENST00000485612 BMP2KLQ5H9B9 411 aa13.77□□□□□ -0.21
SSR4-210ENST00000485612 FAM160B1Q5W0V3 765 aa13.77□□□□□ -0.21
SSR4-210ENST00000485612 DHX32Q7L7V1 743 aaKnown RBP13.77□□□□□ -0.21
SSR4-210ENST00000485612 ST13P5Q8NFI4 369 aaPredicted RBP13.77□□□□□ -0.21
SSR4-210ENST00000485612 NELL1Q92832 810 aa13.77□□□□□ -0.21
SSR4-210ENST00000485612 VN1R3Q9BXE9 311 aa13.77□□□□□ -0.21
SSR4-210ENST00000485612 RHOBTB2Q9BYZ6 727 aa13.77□□□□□ -0.21
SSR4-210ENST00000485612 NRDE2Q9H7Z3 1164 aa13.77□□□□□ -0.21
SSR4-210ENST00000485612 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.77□□□□□ -0.21
SSR4-210ENST00000485612 MTF2Q9Y483 593 aaPredicted RBP13.77□□□□□ -0.21
SSR4-210ENST00000485612 NUMBLQ9Y6R0 609 aa13.77□□□□□ -0.21
SSR4-210ENST00000485612 ATRXP46100 2492 aa13.76□□□□□ -0.21
SSR4-210ENST00000485612 FAM170BA6NMN3 283 aa13.76□□□□□ -0.21
SSR4-210ENST00000485612 LILRB3O75022 631 aa13.76□□□□□ -0.21
SSR4-210ENST00000485612 C22orf31O95567 290 aa13.76□□□□□ -0.21
SSR4-210ENST00000485612 KCNA4P22459 653 aa13.76□□□□□ -0.21
SSR4-210ENST00000485612 EIF4BP23588 611 aaKnown RBP13.76□□□□□ -0.21
SSR4-210ENST00000485612 ADD1P35611 737 aaKnown RBP13.76□□□□□ -0.21
SSR4-210ENST00000485612 ZNF76P36508 570 aa13.76□□□□□ -0.21
SSR4-210ENST00000485612 MAGEA9P43362 315 aa13.76□□□□□ -0.21
SSR4-210ENST00000485612 GPC5P78333 572 aa13.76□□□□□ -0.21
SSR4-210ENST00000485612 AP3B2Q13367 1082 aa13.76□□□□□ -0.21
SSR4-210ENST00000485612 HTR4Q13639 388 aa13.76□□□□□ -0.21
SSR4-210ENST00000485612 RNF20Q5VTR2 975 aa13.76□□□□□ -0.21
SSR4-210ENST00000485612 ELMSAN1Q6PJG2 1045 aa13.76□□□□□ -0.21
SSR4-210ENST00000485612 TSSK4Q6SA08 328 aa13.76□□□□□ -0.21
SSR4-210ENST00000485612 PLA2G4DQ86XP0 818 aa13.76□□□□□ -0.21
SSR4-210ENST00000485612 CRYGNQ8WXF5 182 aa13.76□□□□□ -0.21
SSR4-210ENST00000485612 SMG7Q92540 1137 aaKnown RBP13.76□□□□□ -0.21
SSR4-210ENST00000485612 COL26A1Q96A83 441 aa13.76□□□□□ -0.21
SSR4-210ENST00000485612 DDX23Q9BUQ8 820 aaKnown RBP13.76□□□□□ -0.21
SSR4-210ENST00000485612 OSBPL6Q9BZF3 934 aa13.76□□□□□ -0.21
SSR4-210ENST00000485612 MRPL17Q9NRX2 175 aaKnown RBP13.76□□□□□ -0.21
SSR4-210ENST00000485612 TBC1D13Q9NVG8 400 aa13.76□□□□□ -0.21
SSR4-210ENST00000485612 STK39Q9UEW8 545 aa13.76□□□□□ -0.21
SSR4-210ENST00000485612 DPP7Q9UHL4 492 aa13.76□□□□□ -0.21
SSR4-210ENST00000485612 NAP1L2Q9ULW6 460 aaPredicted RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms