RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 PTENP60484 403 aa13.64□□□□□ -0.23
MSH5-216ENST00000484309 MRPS5P82675 430 aaKnown RBP13.64□□□□□ -0.23
MSH5-216ENST00000484309 TFDP1Q14186 410 aa13.64□□□□□ -0.23
MSH5-216ENST00000484309 MXD4Q14582 209 aaPredicted RBP13.64□□□□□ -0.23
MSH5-216ENST00000484309 ZRSR1Q15695 479 aaKnown RBP13.64□□□□□ -0.23
MSH5-216ENST00000484309 TIGD5Q53EQ6 642 aa13.64□□□□□ -0.23
MSH5-216ENST00000484309 TJAP1Q5JTD0 557 aa13.64□□□□□ -0.23
MSH5-216ENST00000484309 PADI6Q6TGC4 694 aa13.64□□□□□ -0.23
MSH5-216ENST00000484309 DTHD1Q6ZMT9 781 aa13.64□□□□□ -0.23
MSH5-216ENST00000484309 FAM43BQ6ZT52 329 aaPredicted RBP13.64□□□□□ -0.23
MSH5-216ENST00000484309 EP400NLQ6ZTU2 488 aa13.64□□□□□ -0.23
MSH5-216ENST00000484309 IGSF22Q8N9C0 903 aa13.64□□□□□ -0.23
MSH5-216ENST00000484309 COLGALT1Q8NBJ5 622 aa13.64□□□□□ -0.23
MSH5-216ENST00000484309 ATXN2LQ8WWM7 1075 aaKnown RBP13.64□□□□□ -0.23
MSH5-216ENST00000484309 CPB2Q96IY4 423 aa13.64□□□□□ -0.23
MSH5-216ENST00000484309 ASB2Q96Q27 587 aa13.64□□□□□ -0.23
MSH5-216ENST00000484309 PLVAPQ9BX97 442 aa13.64□□□□□ -0.23
MSH5-216ENST00000484309 CWH43Q9H720 699 aa13.64□□□□□ -0.23
MSH5-216ENST00000484309 FAM105AQ9NUU6 356 aa13.64□□□□□ -0.23
MSH5-216ENST00000484309 DDX19AQ9NUU7 478 aaKnown RBP13.64□□□□□ -0.23
MSH5-216ENST00000484309 INPP5FQ9Y2H2 1132 aa13.64□□□□□ -0.23
MSH5-216ENST00000484309 PCDHGC5Q9Y5F6 944 aa13.64□□□□□ -0.23
MSH5-216ENST00000484309 TTC28Q96AY4 2481 aa13.64□□□□□ -0.23
MSH5-216ENST00000484309 VWA3AA6NCI4 1184 aa13.63□□□□□ -0.23
MSH5-216ENST00000484309 LRRIQ4A6NIV6 560 aa13.63□□□□□ -0.23
MSH5-216ENST00000484309 E9PMD0 336 aa13.63□□□□□ -0.23
MSH5-216ENST00000484309 LAD1O00515 517 aa13.63□□□□□ -0.23
MSH5-216ENST00000484309 TSPAN1O60635 241 aa13.63□□□□□ -0.23
MSH5-216ENST00000484309 IRS1P35568 1242 aa13.63□□□□□ -0.23
MSH5-216ENST00000484309 PRPHP41219 470 aa13.63□□□□□ -0.23
MSH5-216ENST00000484309 ATP2C1P98194 919 aaPredicted RBP13.63□□□□□ -0.23
MSH5-216ENST00000484309 MBTD1Q05BQ5 628 aa13.63□□□□□ -0.23
MSH5-216ENST00000484309 CAMK1Q14012 370 aa13.63□□□□□ -0.23
MSH5-216ENST00000484309 CDR2LQ86X02 465 aaPredicted RBP13.63□□□□□ -0.23
MSH5-216ENST00000484309 THNSL1Q8IYQ7 743 aa13.63□□□□□ -0.23
MSH5-216ENST00000484309 LRRC43Q8N309 656 aa13.63□□□□□ -0.23
MSH5-216ENST00000484309 SPPL3Q8TCT6 385 aa13.63□□□□□ -0.23
MSH5-216ENST00000484309 POF1BQ8WVV4 589 aa13.63□□□□□ -0.23
MSH5-216ENST00000484309 BSNDQ8WZ55 320 aa13.63□□□□□ -0.23
MSH5-216ENST00000484309 P2RX5Q93086 422 aa13.63□□□□□ -0.23
MSH5-216ENST00000484309 HLA-CQ95604 372 aa13.63□□□□□ -0.23
MSH5-216ENST00000484309 RAB34Q9BZG1 259 aa13.63□□□□□ -0.23
MSH5-216ENST00000484309 BHMT2Q9H2M3 363 aa13.63□□□□□ -0.23
MSH5-216ENST00000484309 NSUN3Q9H649 340 aaKnown RBP13.63□□□□□ -0.23
MSH5-216ENST00000484309 PCDHB12Q9Y5F1 795 aa13.63□□□□□ -0.23
MSH5-216ENST00000484309 NCOR1O75376 2440 aa13.63□□□□□ -0.23
MSH5-216ENST00000484309 K7ELQ4 463 aaPredicted RBP13.62□□□□□ -0.23
MSH5-216ENST00000484309 B4GALT5O43286 388 aa13.62□□□□□ -0.23
MSH5-216ENST00000484309 EOMESO95936 686 aa13.62□□□□□ -0.23
MSH5-216ENST00000484309 LAG3P18627 525 aa13.62□□□□□ -0.23
MSH5-216ENST00000484309 LIG1P18858 919 aa13.62□□□□□ -0.23
MSH5-216ENST00000484309 HOXA11P31270 313 aaPredicted RBP13.62□□□□□ -0.23
MSH5-216ENST00000484309 GTF2F1P35269 517 aaKnown RBP eCLIP13.62□□□□□ -0.23
MSH5-216ENST00000484309 PDIA5Q14554 519 aa13.62□□□□□ -0.23
MSH5-216ENST00000484309 UBXN11Q5T124 520 aa13.62□□□□□ -0.23
MSH5-216ENST00000484309 KRT79Q5XKE5 535 aa13.62□□□□□ -0.23
MSH5-216ENST00000484309 KCNK18Q7Z418 384 aa13.62□□□□□ -0.23
MSH5-216ENST00000484309 MCPH1Q8NEM0 835 aa13.62□□□□□ -0.23
MSH5-216ENST00000484309 PLIN2Q99541 437 aa13.62□□□□□ -0.23
MSH5-216ENST00000484309 MMTAG2Q9BU76 263 aaKnown RBP13.62□□□□□ -0.23
MSH5-216ENST00000484309 EIF2AQ9BY44 585 aaKnown RBP13.62□□□□□ -0.23
MSH5-216ENST00000484309 LMAN2LQ9H0V9 348 aa13.62□□□□□ -0.23
MSH5-216ENST00000484309 IGFLR1Q9H665 355 aa13.62□□□□□ -0.23
MSH5-216ENST00000484309 UBE2ZQ9H832 354 aaPredicted RBP13.62□□□□□ -0.23
MSH5-216ENST00000484309 AAASQ9NRG9 546 aa13.62□□□□□ -0.23
MSH5-216ENST00000484309 COG5Q9UP83 839 aa13.62□□□□□ -0.23
MSH5-216ENST00000484309 PCDHB2Q9Y5E7 798 aa13.62□□□□□ -0.23
MSH5-216ENST00000484309 A0A0C4DFX4 3053 aa13.62□□□□□ -0.23
MSH5-216ENST00000484309 FGF18O76093 207 aa13.61□□□□□ -0.23
MSH5-216ENST00000484309 CYP11B2P19099 503 aa13.61□□□□□ -0.23
MSH5-216ENST00000484309 MUTP22033 750 aa13.61□□□□□ -0.23
MSH5-216ENST00000484309 KCNA5P22460 613 aa13.61□□□□□ -0.23
MSH5-216ENST00000484309 RAB27AP51159 221 aa13.61□□□□□ -0.23
MSH5-216ENST00000484309 AMHR2Q16671 573 aa13.61□□□□□ -0.23
MSH5-216ENST00000484309 KCNT2Q6UVM3 1135 aa13.61□□□□□ -0.23
MSH5-216ENST00000484309 ADGRD2Q7Z7M1 963 aa13.61□□□□□ -0.23
MSH5-216ENST00000484309 IFNLR1Q8IU57 520 aaPredicted RBP13.61□□□□□ -0.23
MSH5-216ENST00000484309 NECAB3Q96P71 396 aaPredicted RBP13.61□□□□□ -0.23
MSH5-216ENST00000484309 TRAIPQ9BWF2 469 aa13.61□□□□□ -0.23
MSH5-216ENST00000484309 APOL6Q9BWW8 343 aa13.61□□□□□ -0.23
MSH5-216ENST00000484309 GBP3Q9H0R5 595 aa13.61□□□□□ -0.23
MSH5-216ENST00000484309 NT5C1B-RDH14C9J2C7 533 aa13.6□□□□□ -0.23
MSH5-216ENST00000484309 H3BQ06 376 aaPredicted RBP13.6□□□□□ -0.23
MSH5-216ENST00000484309 ZC3H11AO75152 810 aaKnown RBP eCLIP13.6□□□□□ -0.23
MSH5-216ENST00000484309 SKIP12755 728 aa13.6□□□□□ -0.23
MSH5-216ENST00000484309 ARF4P18085 180 aaPredicted RBP13.6□□□□□ -0.23
MSH5-216ENST00000484309 PDCP20941 246 aa13.6□□□□□ -0.23
MSH5-216ENST00000484309 SYT1P21579 422 aa13.6□□□□□ -0.23
MSH5-216ENST00000484309 HYAL1Q12794 435 aa13.6□□□□□ -0.23
MSH5-216ENST00000484309 SF3A1Q15459 793 aaKnown RBP13.6□□□□□ -0.23
MSH5-216ENST00000484309 NAALADL2Q58DX5 795 aa13.6□□□□□ -0.23
MSH5-216ENST00000484309 FAM173BQ6P4H8 233 aa13.6□□□□□ -0.23
MSH5-216ENST00000484309 NOTUMQ6P988 496 aa13.6□□□□□ -0.23
MSH5-216ENST00000484309 GLB1LQ6UWU2 654 aa13.6□□□□□ -0.23
MSH5-216ENST00000484309 AGMOQ6ZNB7 445 aa13.6□□□□□ -0.23
MSH5-216ENST00000484309 BRAPQ7Z569 592 aa13.6□□□□□ -0.23
MSH5-216ENST00000484309 SMG8Q8ND04 991 aaKnown RBP13.6□□□□□ -0.23
MSH5-216ENST00000484309 ADAMTS19Q8TE59 1207 aa13.6□□□□□ -0.23
MSH5-216ENST00000484309 ZNF558Q96NG5 402 aa13.6□□□□□ -0.23
MSH5-216ENST00000484309 PNMA5Q96PV4 448 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms