RNA–Protein interactions for RNA: ENST00000483941.1

SMAD9-204, Transcript of SMAD family member 9, humanhuman

TSL 3

Gene SMAD9, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-204ENST00000483941 EPM2AIP1Q7L775 607 aaPredicted RBP15.37■□□□□ 0.05
SMAD9-204ENST00000483941 HS2ST1Q7LGA3 356 aa15.37■□□□□ 0.05
SMAD9-204ENST00000483941 DAW1Q8N136 415 aa15.37■□□□□ 0.05
SMAD9-204ENST00000483941 TRIM43Q96BQ3 446 aaPredicted RBP15.37■□□□□ 0.05
SMAD9-204ENST00000483941 ACCSQ96QU6 501 aa15.37■□□□□ 0.05
SMAD9-204ENST00000483941 CTAGE1Q96RT6 745 aa15.37■□□□□ 0.05
SMAD9-204ENST00000483941 CEP89Q96ST8 783 aa15.37■□□□□ 0.05
SMAD9-204ENST00000483941 SEZ6LQ9BYH1 1024 aa15.37■□□□□ 0.05
SMAD9-204ENST00000483941 POLR3FQ9H1D9 316 aaPredicted RBP15.37■□□□□ 0.05
SMAD9-204ENST00000483941 C2orf40Q9H1Z8 148 aa15.37■□□□□ 0.05
SMAD9-204ENST00000483941 TBC1D7Q9P0N9 293 aa15.37■□□□□ 0.05
SMAD9-204ENST00000483941 MAGEC2Q9UBF1 373 aaPredicted RBP15.37■□□□□ 0.05
SMAD9-204ENST00000483941 MAPK8IP1Q9UQF2 711 aa15.37■□□□□ 0.05
SMAD9-204ENST00000483941 NFE2L3Q9Y4A8 694 aa15.37■□□□□ 0.05
SMAD9-204ENST00000483941 BDP1A6H8Y1 2624 aa15.36■□□□□ 0.05
SMAD9-204ENST00000483941 XIRP2A4UGR9 3374 aa15.36■□□□□ 0.05
SMAD9-204ENST00000483941 PDXKO00764 312 aa15.36■□□□□ 0.05
SMAD9-204ENST00000483941 GNA14O95837 355 aa15.36■□□□□ 0.05
SMAD9-204ENST00000483941 TPM2P07951 284 aa15.36■□□□□ 0.05
SMAD9-204ENST00000483941 EFNA5P52803 228 aa15.36■□□□□ 0.05
SMAD9-204ENST00000483941 NCKAP1LP55160 1127 aa15.36■□□□□ 0.05
SMAD9-204ENST00000483941 GTF2BQ00403 316 aa15.36■□□□□ 0.05
SMAD9-204ENST00000483941 PURAQ00577 322 aaKnown RBP15.36■□□□□ 0.05
SMAD9-204ENST00000483941 FKBP3Q00688 224 aaKnown RBP15.36■□□□□ 0.05
SMAD9-204ENST00000483941 POU5F1BQ06416 359 aa15.36■□□□□ 0.05
SMAD9-204ENST00000483941 GRIK4Q16099 956 aa15.36■□□□□ 0.05
SMAD9-204ENST00000483941 KIAA0753Q2KHM9 967 aa15.36■□□□□ 0.05
SMAD9-204ENST00000483941 EDRF1Q3B7T1 1238 aa15.36■□□□□ 0.05
SMAD9-204ENST00000483941 C1orf53Q5VUE5 145 aa15.36■□□□□ 0.05
SMAD9-204ENST00000483941 SYCP3Q8IZU3 236 aa15.36■□□□□ 0.05
SMAD9-204ENST00000483941 CSGALNACT2Q8N6G5 542 aa15.36■□□□□ 0.05
SMAD9-204ENST00000483941 C7orf31Q8N865 590 aa15.36■□□□□ 0.05
SMAD9-204ENST00000483941 SCFD1Q8WVM8 642 aa15.36■□□□□ 0.05
SMAD9-204ENST00000483941 MAP7D2Q96T17 732 aa15.36■□□□□ 0.05
SMAD9-204ENST00000483941 SH2D3AQ9BRG2 576 aa15.36■□□□□ 0.05
SMAD9-204ENST00000483941 TSEN34Q9BSV6 310 aaKnown RBP15.36■□□□□ 0.05
SMAD9-204ENST00000483941 THAP9Q9H5L6 903 aa15.36■□□□□ 0.05
SMAD9-204ENST00000483941 SUGCTQ9HAC7 445 aa15.36■□□□□ 0.05
SMAD9-204ENST00000483941 XPNPEP1Q9NQW7 623 aa15.36■□□□□ 0.05
SMAD9-204ENST00000483941 DOCK5Q9H7D0 1870 aa15.35■□□□□ 0.05
SMAD9-204ENST00000483941 CHD7Q9P2D1 2997 aa15.35■□□□□ 0.05
SMAD9-204ENST00000483941 MOXD2PA6NHM9 499 aa15.35■□□□□ 0.05
SMAD9-204ENST00000483941 HAS3O00219 553 aa15.35■□□□□ 0.05
SMAD9-204ENST00000483941 CBFA2T2O43439 604 aa15.35■□□□□ 0.05
SMAD9-204ENST00000483941 KLRC1P26715 233 aa15.35■□□□□ 0.05
SMAD9-204ENST00000483941 NPTX2P47972 431 aa15.35■□□□□ 0.05
SMAD9-204ENST00000483941 STRN3Q13033 797 aa15.35■□□□□ 0.05
SMAD9-204ENST00000483941 MYBPC2Q14324 1141 aa15.35■□□□□ 0.05
SMAD9-204ENST00000483941 GRIN2CQ14957 1233 aa15.35■□□□□ 0.05
SMAD9-204ENST00000483941 LRRC41Q15345 812 aa15.35■□□□□ 0.05
SMAD9-204ENST00000483941 EFCAB12Q6NXP0 572 aa15.35■□□□□ 0.05
SMAD9-204ENST00000483941 HAUS6Q7Z4H7 955 aa15.35■□□□□ 0.05
SMAD9-204ENST00000483941 ZBTB8OSQ8IWT0 167 aa15.35■□□□□ 0.05
SMAD9-204ENST00000483941 METTL13Q8N6R0 699 aa15.35■□□□□ 0.05
SMAD9-204ENST00000483941 KLHDC9Q8NEP7 349 aa15.35■□□□□ 0.05
SMAD9-204ENST00000483941 DEPTORQ8TB45 409 aa15.35■□□□□ 0.05
SMAD9-204ENST00000483941 HPS3Q969F9 1004 aa15.35■□□□□ 0.05
SMAD9-204ENST00000483941 CEP63Q96MT8 703 aa15.35■□□□□ 0.05
SMAD9-204ENST00000483941 GBP3Q9H0R5 595 aa15.35■□□□□ 0.05
SMAD9-204ENST00000483941 TYW1Q9NV66 732 aaKnown RBP15.35■□□□□ 0.05
SMAD9-204ENST00000483941 SUCLA2Q9P2R7 463 aaPredicted RBP15.35■□□□□ 0.05
SMAD9-204ENST00000483941 TRAF3IP3Q9Y228 551 aa15.35■□□□□ 0.05
SMAD9-204ENST00000483941 NCOR1O75376 2440 aa15.34■□□□□ 0.05
SMAD9-204ENST00000483941 ZBTB42B2RXF5 422 aa15.34■□□□□ 0.05
SMAD9-204ENST00000483941 ADAMTS4O75173 837 aa15.34■□□□□ 0.05
SMAD9-204ENST00000483941 C22orf31O95567 290 aa15.34■□□□□ 0.05
SMAD9-204ENST00000483941 CLTBP09497 229 aa15.34■□□□□ 0.05
SMAD9-204ENST00000483941 SMIM10L2AP0DMW4 78 aa15.34■□□□□ 0.05
SMAD9-204ENST00000483941 SMIM10L2BP0DMW5 78 aa15.34■□□□□ 0.05
SMAD9-204ENST00000483941 MYBP10242 640 aa15.34■□□□□ 0.05
SMAD9-204ENST00000483941 DNAJB2P25686 324 aa15.34■□□□□ 0.05
SMAD9-204ENST00000483941 EEF1GP26641 437 aaKnown RBP15.34■□□□□ 0.05
SMAD9-204ENST00000483941 NMT1P30419 496 aaKnown RBP15.34■□□□□ 0.05
SMAD9-204ENST00000483941 STX17P56962 302 aa15.34■□□□□ 0.05
SMAD9-204ENST00000483941 IGBP1P78318 339 aa15.34■□□□□ 0.05
SMAD9-204ENST00000483941 PLCB2Q00722 1185 aa15.34■□□□□ 0.05
SMAD9-204ENST00000483941 BEX3Q00994 111 aa15.34■□□□□ 0.05
SMAD9-204ENST00000483941 TLE2Q04725 743 aa15.34■□□□□ 0.05
SMAD9-204ENST00000483941 NCAPHQ15003 741 aa15.34■□□□□ 0.05
SMAD9-204ENST00000483941 NFIL3Q16649 462 aa15.34■□□□□ 0.05
SMAD9-204ENST00000483941 FILIP1LQ4L180 1135 aa15.34■□□□□ 0.05
SMAD9-204ENST00000483941 TTI2Q6NXR4 508 aa15.34■□□□□ 0.05
SMAD9-204ENST00000483941 SARM1Q6SZW1 724 aa15.34■□□□□ 0.05
SMAD9-204ENST00000483941 MTHFD1LQ6UB35 978 aa15.34■□□□□ 0.05
SMAD9-204ENST00000483941 KAT2BQ92831 832 aa15.34■□□□□ 0.05
SMAD9-204ENST00000483941 TMEM143Q96AN5 459 aa15.34■□□□□ 0.05
SMAD9-204ENST00000483941 TMEM134Q9H6X4 195 aa15.34■□□□□ 0.05
SMAD9-204ENST00000483941 GPRC5CQ9NQ84 441 aa15.34■□□□□ 0.05
SMAD9-204ENST00000483941 FANCLQ9NW38 375 aa15.34■□□□□ 0.05
SMAD9-204ENST00000483941 RAPGEFL1Q9UHV5 662 aa15.34■□□□□ 0.05
SMAD9-204ENST00000483941 C17orf102A2RUQ5 167 aa15.33■□□□□ 0.04
SMAD9-204ENST00000483941 CETN3O15182 167 aa15.33■□□□□ 0.04
SMAD9-204ENST00000483941 PPP1R37O75864 691 aa15.33■□□□□ 0.04
SMAD9-204ENST00000483941 PRPF6O94906 941 aaKnown RBP15.33■□□□□ 0.04
SMAD9-204ENST00000483941 PGK1P00558 417 aa15.33■□□□□ 0.04
SMAD9-204ENST00000483941 GLRA2P23416 452 aa15.33■□□□□ 0.04
SMAD9-204ENST00000483941 ITGB8P26012 769 aa15.33■□□□□ 0.04
SMAD9-204ENST00000483941 EPHB4P54760 987 aa15.33■□□□□ 0.04
SMAD9-204ENST00000483941 PTPN11Q06124 597 aaPredicted RBP15.33■□□□□ 0.04
SMAD9-204ENST00000483941 ANKRD40Q6AI12 368 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms