RNA–Protein interactions for RNA: ENST00000483359.5

CPNE1-224, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-224ENST00000483359 K7ENM7 598 aa19.68■□□□□ 0.74
CPNE1-224ENST00000483359 TRAK2O60296 914 aa19.68■□□□□ 0.74
CPNE1-224ENST00000483359 CXCL10P02778 98 aa19.68■□□□□ 0.74
CPNE1-224ENST00000483359 MBTD1Q05BQ5 628 aa19.68■□□□□ 0.74
CPNE1-224ENST00000483359 COASYQ13057 564 aa19.68■□□□□ 0.74
CPNE1-224ENST00000483359 POSTNQ15063 836 aa19.68■□□□□ 0.74
CPNE1-224ENST00000483359 HERC4Q5GLZ8 1057 aaPredicted RBP19.68■□□□□ 0.74
CPNE1-224ENST00000483359 CDCA2Q69YH5 1023 aaPredicted RBP19.68■□□□□ 0.74
CPNE1-224ENST00000483359 FAM178BQ8IXR5 827 aa19.68■□□□□ 0.74
CPNE1-224ENST00000483359 CCDC34Q96HJ3 373 aa19.68■□□□□ 0.74
CPNE1-224ENST00000483359 C17orf75Q9HAS0 396 aa19.68■□□□□ 0.74
CPNE1-224ENST00000483359 IL23AQ9NPF7 189 aa19.68■□□□□ 0.74
CPNE1-224ENST00000483359 GTPBP6O43824 516 aaPredicted RBP19.67■□□□□ 0.74
CPNE1-224ENST00000483359 SFPQP23246 707 aaKnown RBP eCLIP19.67■□□□□ 0.748e-7■□□□□ 11.1
CPNE1-224ENST00000483359 NMT1P30419 496 aaKnown RBP19.67■□□□□ 0.74
CPNE1-224ENST00000483359 SMTNP53814 917 aa19.67■□□□□ 0.74
CPNE1-224ENST00000483359 PLEKHG4Q58EX7 1191 aa19.67■□□□□ 0.74
CPNE1-224ENST00000483359 C16orf59Q7L2K0 433 aa19.67■□□□□ 0.74
CPNE1-224ENST00000483359 OTOP2Q7RTS6 562 aa19.67■□□□□ 0.74
CPNE1-224ENST00000483359 CATSPER4Q7RTX7 472 aa19.67■□□□□ 0.74
CPNE1-224ENST00000483359 CCDC65Q8IXS2 484 aa19.67■□□□□ 0.74
CPNE1-224ENST00000483359 GPT2Q8TD30 523 aa19.67■□□□□ 0.74
CPNE1-224ENST00000483359 USP20Q9Y2K6 914 aa19.67■□□□□ 0.74
CPNE1-224ENST00000483359 CAMK4Q16566 473 aa19.66■□□□□ 0.74
CPNE1-224ENST00000483359 KANK3Q6NY19 840 aa19.66■□□□□ 0.74
CPNE1-224ENST00000483359 SRGAP1Q7Z6B7 1085 aa19.66■□□□□ 0.74
CPNE1-224ENST00000483359 RPUSD2Q8IZ73 545 aaKnown RBP19.66■□□□□ 0.74
CPNE1-224ENST00000483359 USP38Q8NB14 1042 aa19.66■□□□□ 0.74
CPNE1-224ENST00000483359 SEPT8Q92599 483 aa19.66■□□□□ 0.74
CPNE1-224ENST00000483359 TIGD1Q96MW7 591 aa19.66■□□□□ 0.74
CPNE1-224ENST00000483359 MRPL44Q9H9J2 332 aaKnown RBP19.66■□□□□ 0.74
CPNE1-224ENST00000483359 FRMD3A2A2Y4 597 aa19.66■□□□□ 0.74
CPNE1-224ENST00000483359 DENND3A2RUS2 1198 aa19.66■□□□□ 0.74
CPNE1-224ENST00000483359 GPR182O15218 404 aa19.66■□□□□ 0.74
CPNE1-224ENST00000483359 ERLIN2O94905 339 aa19.66■□□□□ 0.74
CPNE1-224ENST00000483359 IBSPP21815 317 aaPredicted RBP19.66■□□□□ 0.74
CPNE1-224ENST00000483359 DPYDQ12882 1025 aa19.66■□□□□ 0.74
CPNE1-224ENST00000483359 UNC13DQ70J99 1090 aa19.66■□□□□ 0.74
CPNE1-224ENST00000483359 ZNF365Q70YC5 407 aa19.66■□□□□ 0.74
CPNE1-224ENST00000483359 SPIRE2Q8WWL2 714 aa19.66■□□□□ 0.74
CPNE1-224ENST00000483359 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.66■□□□□ 0.744e-13■■■■■ 56.2
CPNE1-224ENST00000483359 NFKBIZQ9BYH8 718 aa19.66■□□□□ 0.74
CPNE1-224ENST00000483359 FGFBP2Q9BYJ0 223 aa19.66■□□□□ 0.74
CPNE1-224ENST00000483359 C2orf40Q9H1Z8 148 aa19.66■□□□□ 0.74
CPNE1-224ENST00000483359 ERVK-5Q9HDB9 667 aa19.66■□□□□ 0.74
CPNE1-224ENST00000483359 ARHGAP28Q9P2N2 729 aa19.66■□□□□ 0.74
CPNE1-224ENST00000483359 SQORQ9Y6N5 450 aa19.66■□□□□ 0.74
CPNE1-224ENST00000483359 B4GALT5O43286 388 aa19.65■□□□□ 0.74
CPNE1-224ENST00000483359 GAP43P17677 238 aa19.65■□□□□ 0.74
CPNE1-224ENST00000483359 NCKAP1LP55160 1127 aa19.65■□□□□ 0.74
CPNE1-224ENST00000483359 POU5F1BQ06416 359 aa19.65■□□□□ 0.74
CPNE1-224ENST00000483359 TMEM161BQ8NDZ6 487 aa19.65■□□□□ 0.74
CPNE1-224ENST00000483359 FIZ1Q96SL8 496 aa19.65■□□□□ 0.74
CPNE1-224ENST00000483359 PIN4Q9Y237 131 aaKnown RBP19.65■□□□□ 0.74
CPNE1-224ENST00000483359 EDN1P05305 212 aa19.64■□□□□ 0.74
CPNE1-224ENST00000483359 ZC2HC1CQ53FD0 456 aaPredicted RBP19.64■□□□□ 0.74
CPNE1-224ENST00000483359 CNNM4Q6P4Q7 775 aa19.64■□□□□ 0.74
CPNE1-224ENST00000483359 CNKSR3Q6P9H4 555 aa19.64■□□□□ 0.74
CPNE1-224ENST00000483359 HAUS6Q7Z4H7 955 aa19.64■□□□□ 0.74
CPNE1-224ENST00000483359 IFNLR1Q8IU57 520 aaPredicted RBP19.64■□□□□ 0.74
CPNE1-224ENST00000483359 CPB2Q96IY4 423 aa19.64■□□□□ 0.74
CPNE1-224ENST00000483359 UBE2OQ9C0C9 1292 aaKnown RBP19.64■□□□□ 0.74
CPNE1-224ENST00000483359 CCDC113Q9H0I3 377 aa19.64■□□□□ 0.74
CPNE1-224ENST00000483359 TMX1Q9H3N1 280 aa19.64■□□□□ 0.74
CPNE1-224ENST00000483359 LAMA2P24043 3122 aaKnown RBP19.64■□□□□ 0.74
CPNE1-224ENST00000483359 PHLPP2Q6ZVD8 1323 aa19.64■□□□□ 0.74
CPNE1-224ENST00000483359 K7ERI5 159 aa19.64■□□□□ 0.73
CPNE1-224ENST00000483359 KLRC4O43908 158 aa19.64■□□□□ 0.73
CPNE1-224ENST00000483359 GCNT3O95395 438 aa19.64■□□□□ 0.73
CPNE1-224ENST00000483359 RPN1P04843 607 aaKnown RBP19.64■□□□□ 0.73
CPNE1-224ENST00000483359 PRKCBP05771 671 aa19.64■□□□□ 0.73
CPNE1-224ENST00000483359 MYL1P05976 194 aa19.64■□□□□ 0.73
CPNE1-224ENST00000483359 PFKMP08237 780 aa19.64■□□□□ 0.73
CPNE1-224ENST00000483359 CASP5P51878 434 aa19.64■□□□□ 0.73
CPNE1-224ENST00000483359 MAPK6Q16659 721 aa19.64■□□□□ 0.73
CPNE1-224ENST00000483359 KMT5BQ4FZB7 885 aa19.64■□□□□ 0.73
CPNE1-224ENST00000483359 PSRC1Q6PGN9 363 aaPredicted RBP19.64■□□□□ 0.73
CPNE1-224ENST00000483359 TAS1R3Q7RTX0 852 aa19.64■□□□□ 0.73
CPNE1-224ENST00000483359 CDR2LQ86X02 465 aaPredicted RBP19.64■□□□□ 0.73
CPNE1-224ENST00000483359 GLIS3Q8NEA6 775 aa19.64■□□□□ 0.73
CPNE1-224ENST00000483359 NTPCRQ9BSD7 190 aaKnown RBP19.64■□□□□ 0.73
CPNE1-224ENST00000483359 EXOC1Q9NV70 894 aa19.64■□□□□ 0.73
CPNE1-224ENST00000483359 TTLL13PA6NNM8 815 aa19.63■□□□□ 0.73
CPNE1-224ENST00000483359 ZBBXA8MT70 800 aa19.63■□□□□ 0.73
CPNE1-224ENST00000483359 MGEA5O60502 916 aa19.63■□□□□ 0.73
CPNE1-224ENST00000483359 TSPAN1O60635 241 aa19.63■□□□□ 0.73
CPNE1-224ENST00000483359 FGBP02675 491 aa19.63■□□□□ 0.73
CPNE1-224ENST00000483359 MAPTP10636 758 aaKnown RBP19.63■□□□□ 0.73
CPNE1-224ENST00000483359 EFNA5P52803 228 aa19.63■□□□□ 0.73
CPNE1-224ENST00000483359 AMHR2Q16671 573 aa19.63■□□□□ 0.73
CPNE1-224ENST00000483359 TMEM132AQ24JP5 1023 aa19.63■□□□□ 0.73
CPNE1-224ENST00000483359 TMEM240Q5SV17 173 aa19.63■□□□□ 0.73
CPNE1-224ENST00000483359 C9orf50Q5SZB4 431 aa19.63■□□□□ 0.73
CPNE1-224ENST00000483359 GDF15Q99988 308 aa19.63■□□□□ 0.73
CPNE1-224ENST00000483359 PRMT7Q9NVM4 692 aaPredicted RBP19.63■□□□□ 0.73
CPNE1-224ENST00000483359 SEL1LQ9UBV2 794 aa19.63■□□□□ 0.73
CPNE1-224ENST00000483359 HOOK1Q9UJC3 728 aaKnown RBP19.63■□□□□ 0.73
CPNE1-224ENST00000483359 LAMA3Q16787 3333 aa19.63■□□□□ 0.73
CPNE1-224ENST00000483359 MYBP10242 640 aa19.63■□□□□ 0.73
CPNE1-224ENST00000483359 FAM26FQ5R3K3 315 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms