RNA–Protein interactions for RNA: ENST00000482714.5

CCM2-215, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-215ENST00000482714 BSNDQ8WZ55 320 aa16.92■□□□□ 0.3
CCM2-215ENST00000482714 SMARCE1Q969G3 411 aa16.92■□□□□ 0.3
CCM2-215ENST00000482714 SYAP1Q96A49 352 aaPredicted RBP16.92■□□□□ 0.3
CCM2-215ENST00000482714 HVCN1Q96D96 273 aa16.92■□□□□ 0.3
CCM2-215ENST00000482714 SCLT1Q96NL6 688 aa16.92■□□□□ 0.3
CCM2-215ENST00000482714 FZD8Q9H461 694 aa16.92■□□□□ 0.3
CCM2-215ENST00000482714 CLSTN2Q9H4D0 955 aa16.92■□□□□ 0.3
CCM2-215ENST00000482714 POLD4Q9HCU8 107 aa16.92■□□□□ 0.3
CCM2-215ENST00000482714 PRMT7Q9NVM4 692 aaPredicted RBP16.92■□□□□ 0.3
CCM2-215ENST00000482714 PCDHA5Q9Y5H7 936 aa16.92■□□□□ 0.3
CCM2-215ENST00000482714 LRRIQ4A6NIV6 560 aa16.91■□□□□ 0.3
CCM2-215ENST00000482714 RPS6KA5O75582 802 aa16.91■□□□□ 0.3
CCM2-215ENST00000482714 SFPQP23246 707 aaKnown RBP eCLIP16.91■□□□□ 0.3
CCM2-215ENST00000482714 AXLP30530 894 aa16.91■□□□□ 0.3
CCM2-215ENST00000482714 CYP2C18P33260 490 aa16.91■□□□□ 0.3
CCM2-215ENST00000482714 GTF2BQ00403 316 aa16.91■□□□□ 0.3
CCM2-215ENST00000482714 CACNB1Q02641 598 aaPredicted RBP16.91■□□□□ 0.3
CCM2-215ENST00000482714 MAPK6Q16659 721 aa16.91■□□□□ 0.3
CCM2-215ENST00000482714 PPP4R3CPQ6ZMV5 832 aa16.91■□□□□ 0.3
CCM2-215ENST00000482714 TSHZ1Q6ZSZ6 1077 aa16.91■□□□□ 0.3
CCM2-215ENST00000482714 HAUS6Q7Z4H7 955 aa16.91■□□□□ 0.3
CCM2-215ENST00000482714 GRAMD1CQ8IYS0 662 aa16.91■□□□□ 0.3
CCM2-215ENST00000482714 TMEM161BQ8NDZ6 487 aa16.91■□□□□ 0.3
CCM2-215ENST00000482714 FIZ1Q96SL8 496 aa16.91■□□□□ 0.3
CCM2-215ENST00000482714 OSMRQ99650 979 aa16.91■□□□□ 0.3
CCM2-215ENST00000482714 PPP1R12CQ9BZL4 782 aa16.91■□□□□ 0.3
CCM2-215ENST00000482714 NUP62CLQ9H1M0 184 aa16.91■□□□□ 0.3
CCM2-215ENST00000482714 MRPL44Q9H9J2 332 aaKnown RBP16.91■□□□□ 0.3
CCM2-215ENST00000482714 CDHR5Q9HBB8 845 aa16.91■□□□□ 0.3
CCM2-215ENST00000482714 CHST12Q9NRB3 414 aa16.91■□□□□ 0.3
CCM2-215ENST00000482714 KIAA1468Q9P260 1216 aa16.91■□□□□ 0.3
CCM2-215ENST00000482714 GINS2Q9Y248 185 aa16.91■□□□□ 0.3
CCM2-215ENST00000482714 ACKR2O00590 384 aa16.9■□□□□ 0.3
CCM2-215ENST00000482714 KIF20AO95235 890 aa16.9■□□□□ 0.3
CCM2-215ENST00000482714 CTSHP09668 335 aa16.9■□□□□ 0.3
CCM2-215ENST00000482714 COASYQ13057 564 aa16.9■□□□□ 0.3
CCM2-215ENST00000482714 PNOCQ13519 176 aa16.9■□□□□ 0.3
CCM2-215ENST00000482714 NFKBIBQ15653 356 aa16.9■□□□□ 0.3
CCM2-215ENST00000482714 KMT5BQ4FZB7 885 aa16.9■□□□□ 0.3
CCM2-215ENST00000482714 TRIML1Q8N9V2 468 aa16.9■□□□□ 0.3
CCM2-215ENST00000482714 APBB2Q92870 758 aa16.9■□□□□ 0.3
CCM2-215ENST00000482714 STRA6Q9BX79 667 aa16.9■□□□□ 0.3
CCM2-215ENST00000482714 FTHL17Q9BXU8 183 aa16.9■□□□□ 0.3
CCM2-215ENST00000482714 WNT8AQ9H1J5 351 aa16.9■□□□□ 0.3
CCM2-215ENST00000482714 EXOC1Q9NV70 894 aa16.9■□□□□ 0.3
CCM2-215ENST00000482714 INO80B-WBP1J3KQ70 363 aa16.89■□□□□ 0.29
CCM2-215ENST00000482714 CCL23P55773 120 aa16.89■□□□□ 0.29
CCM2-215ENST00000482714 PPIGQ13427 754 aaKnown RBP eCLIP16.89■□□□□ 0.29
CCM2-215ENST00000482714 LPIN1Q14693 890 aa16.89■□□□□ 0.29
CCM2-215ENST00000482714 GPNMBQ14956 572 aa16.89■□□□□ 0.29
CCM2-215ENST00000482714 PLEKHG4Q58EX7 1191 aa16.89■□□□□ 0.29
CCM2-215ENST00000482714 FAM26FQ5R3K3 315 aa16.89■□□□□ 0.29
CCM2-215ENST00000482714 SFR1Q86XK3 245 aa16.89■□□□□ 0.29
CCM2-215ENST00000482714 LBHD1Q9BQE6 289 aaPredicted RBP16.89■□□□□ 0.29
CCM2-215ENST00000482714 TMEM206Q9H813 350 aa16.89■□□□□ 0.29
CCM2-215ENST00000482714 NOC2LQ9Y3T9 749 aaKnown RBP16.89■□□□□ 0.29
CCM2-215ENST00000482714 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.88■□□□□ 0.29
CCM2-215ENST00000482714 EIF3DO15371 548 aaKnown RBP eCLIP16.88■□□□□ 0.29
CCM2-215ENST00000482714 NBNO60934 754 aa16.88■□□□□ 0.29
CCM2-215ENST00000482714 LETM1O95202 739 aaPredicted RBP16.88■□□□□ 0.29
CCM2-215ENST00000482714 PRR29P0C7W0 189 aa16.88■□□□□ 0.29
CCM2-215ENST00000482714 ITGB8P26012 769 aa16.88■□□□□ 0.29
CCM2-215ENST00000482714 CASP1P29466 404 aa16.88■□□□□ 0.29
CCM2-215ENST00000482714 PPP1R2P41236 205 aa16.88■□□□□ 0.29
CCM2-215ENST00000482714 MBTD1Q05BQ5 628 aa16.88■□□□□ 0.29
CCM2-215ENST00000482714 STRN3Q13033 797 aa16.88■□□□□ 0.29
CCM2-215ENST00000482714 MBTPS1Q14703 1052 aa16.88■□□□□ 0.29
CCM2-215ENST00000482714 ZNF507Q8TCN5 953 aa16.88■□□□□ 0.29
CCM2-215ENST00000482714 TMEM40Q8WWA1 233 aa16.88■□□□□ 0.29
CCM2-215ENST00000482714 SEPT8Q92599 483 aa16.88■□□□□ 0.29
CCM2-215ENST00000482714 ST3GAL5Q9UNP4 418 aa16.88■□□□□ 0.29
CCM2-215ENST00000482714 EXOC7Q9UPT5 735 aa16.88■□□□□ 0.29
CCM2-215ENST00000482714 UMODL1Q5DID0 1318 aa16.88■□□□□ 0.29
CCM2-215ENST00000482714 DENND3A2RUS2 1198 aa16.87■□□□□ 0.29
CCM2-215ENST00000482714 SLC16A4O15374 487 aa16.87■□□□□ 0.29
CCM2-215ENST00000482714 EFCAB14O75071 495 aa16.87■□□□□ 0.29
CCM2-215ENST00000482714 PPP1R37O75864 691 aa16.87■□□□□ 0.29
CCM2-215ENST00000482714 SNRPFP62306 86 aaKnown RBP16.87■□□□□ 0.29
CCM2-215ENST00000482714 PAK2Q13177 524 aa16.87■□□□□ 0.29
CCM2-215ENST00000482714 CAMK4Q16566 473 aa16.87■□□□□ 0.29
CCM2-215ENST00000482714 COBLL1Q53SF7 1204 aa16.87■□□□□ 0.29
CCM2-215ENST00000482714 CCDC183Q5T5S1 534 aa16.87■□□□□ 0.29
CCM2-215ENST00000482714 ZNF658Q5TYW1 1059 aaPredicted RBP16.87■□□□□ 0.29
CCM2-215ENST00000482714 RBM43Q6ZSC3 357 aaKnown RBP16.87■□□□□ 0.29
CCM2-215ENST00000482714 CATSPER4Q7RTX7 472 aa16.87■□□□□ 0.29
CCM2-215ENST00000482714 TRAIPQ9BWF2 469 aa16.87■□□□□ 0.29
CCM2-215ENST00000482714 IFIH1Q9BYX4 1025 aaKnown RBP16.87■□□□□ 0.29
CCM2-215ENST00000482714 CCDC113Q9H0I3 377 aa16.87■□□□□ 0.29
CCM2-215ENST00000482714 AGO3Q9H9G7 860 aaKnown RBP16.87■□□□□ 0.29
CCM2-215ENST00000482714 ERVK-5Q9HDB9 667 aa16.87■□□□□ 0.29
CCM2-215ENST00000482714 IL23AQ9NPF7 189 aa16.87■□□□□ 0.29
CCM2-215ENST00000482714 RNF216Q9NWF9 866 aaPredicted RBP16.87■□□□□ 0.29
CCM2-215ENST00000482714 PADI3Q9ULW8 664 aa16.87■□□□□ 0.29
CCM2-215ENST00000482714 TBX20Q9UMR3 447 aa16.87■□□□□ 0.29
CCM2-215ENST00000482714 MYH11P35749 1972 aa16.87■□□□□ 0.29
CCM2-215ENST00000482714 K7ENM7 598 aa16.86■□□□□ 0.29
CCM2-215ENST00000482714 ERLIN2O94905 339 aa16.86■□□□□ 0.29
CCM2-215ENST00000482714 GHRP10912 638 aa16.86■□□□□ 0.29
CCM2-215ENST00000482714 ZSCAN20P17040 1043 aaPredicted RBP16.86■□□□□ 0.29
CCM2-215ENST00000482714 NMT1P30419 496 aaKnown RBP16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms