RNA–Protein interactions for RNA: ENST00000482507.5

ATG4B-220, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4B, Length 2,414 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-220ENST00000482507 CAP2P40123 477 aa16.15■□□□□ 0.18
ATG4B-220ENST00000482507 POU5F1Q01860 360 aaKnown RBP16.15■□□□□ 0.18
ATG4B-220ENST00000482507 ZNF844Q08AG5 666 aa16.15■□□□□ 0.18
ATG4B-220ENST00000482507 ZYXQ15942 572 aaKnown RBP16.15■□□□□ 0.18
ATG4B-220ENST00000482507 PTGISQ16647 500 aa16.15■□□□□ 0.18
ATG4B-220ENST00000482507 MICALL1Q8N3F8 863 aa16.15■□□□□ 0.18
ATG4B-220ENST00000482507 SLC35G2Q8TBE7 412 aa16.15■□□□□ 0.18
ATG4B-220ENST00000482507 ARHGEF26Q96DR7 871 aa16.15■□□□□ 0.18
ATG4B-220ENST00000482507 EPN3Q9H201 632 aa16.15■□□□□ 0.18
ATG4B-220ENST00000482507 INTUQ9ULD6 942 aa16.15■□□□□ 0.18
ATG4B-220ENST00000482507 CLEC11AQ9Y240 323 aa16.15■□□□□ 0.18
ATG4B-220ENST00000482507 PIK3CDO00329 1044 aa16.14■□□□□ 0.17
ATG4B-220ENST00000482507 PPP1R37O75864 691 aa16.14■□□□□ 0.17
ATG4B-220ENST00000482507 HPDP32754 393 aaPredicted RBP16.14■□□□□ 0.17
ATG4B-220ENST00000482507 MDH1P40925 334 aaKnown RBP16.14■□□□□ 0.17
ATG4B-220ENST00000482507 CYP2J2P51589 502 aa16.14■□□□□ 0.17
ATG4B-220ENST00000482507 VPS36Q86VN1 386 aa16.14■□□□□ 0.17
ATG4B-220ENST00000482507 SULF1Q8IWU6 871 aa16.14■□□□□ 0.17
ATG4B-220ENST00000482507 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.14■□□□□ 0.176e-11■■■■■ 51.9
ATG4B-220ENST00000482507 ZBTB21Q9ULJ3 1066 aa16.14■□□□□ 0.17
ATG4B-220ENST00000482507 HMGB1P1B2RPK0 211 aaPredicted RBP16.14■□□□□ 0.17
ATG4B-220ENST00000482507 MYO1FO00160 1098 aa16.14■□□□□ 0.17
ATG4B-220ENST00000482507 DDX3YO15523 660 aaKnown RBP16.14■□□□□ 0.17
ATG4B-220ENST00000482507 ABCB4P21439 1286 aa16.14■□□□□ 0.17
ATG4B-220ENST00000482507 NPEPPSP55786 919 aa16.14■□□□□ 0.17
ATG4B-220ENST00000482507 MAP3K10Q02779 954 aa16.14■□□□□ 0.17
ATG4B-220ENST00000482507 PPATQ06203 517 aa16.14■□□□□ 0.17
ATG4B-220ENST00000482507 LRCH2Q5VUJ6 765 aa16.14■□□□□ 0.17
ATG4B-220ENST00000482507 NAA35Q5VZE5 725 aa16.14■□□□□ 0.17
ATG4B-220ENST00000482507 LRIG3Q6UXM1 1119 aa16.14■□□□□ 0.17
ATG4B-220ENST00000482507 ZNF720Q7Z2F6 126 aa16.14■□□□□ 0.17
ATG4B-220ENST00000482507 STK33Q9BYT3 514 aa16.14■□□□□ 0.17
ATG4B-220ENST00000482507 CENPHQ9H3R5 247 aa16.14■□□□□ 0.17
ATG4B-220ENST00000482507 DMAC2Q9NW81 257 aa16.14■□□□□ 0.17
ATG4B-220ENST00000482507 STK24Q9Y6E0 443 aa16.14■□□□□ 0.17
ATG4B-220ENST00000482507 NCANO14594 1321 aa16.13■□□□□ 0.17
ATG4B-220ENST00000482507 COL2A1P02458 1487 aaPredicted RBP16.13■□□□□ 0.17
ATG4B-220ENST00000482507 CCDC188H7C350 402 aa16.13■□□□□ 0.17
ATG4B-220ENST00000482507 LRRN2O75325 713 aa16.13■□□□□ 0.17
ATG4B-220ENST00000482507 CFBP00751 764 aa16.13■□□□□ 0.17
ATG4B-220ENST00000482507 COPB2P35606 906 aa16.13■□□□□ 0.17
ATG4B-220ENST00000482507 DGKZQ13574 1117 aa16.13■□□□□ 0.17
ATG4B-220ENST00000482507 NFIL3Q16649 462 aa16.13■□□□□ 0.17
ATG4B-220ENST00000482507 LMBR1Q8WVP7 490 aa16.13■□□□□ 0.17
ATG4B-220ENST00000482507 SEC14L1Q92503 715 aa16.13■□□□□ 0.17
ATG4B-220ENST00000482507 TRIM51Q9BSJ1 452 aa16.13■□□□□ 0.17
ATG4B-220ENST00000482507 PARVGQ9HBI0 331 aa16.13■□□□□ 0.17
ATG4B-220ENST00000482507 TUFT1Q9NNX1 390 aa16.13■□□□□ 0.17
ATG4B-220ENST00000482507 AGPAT3Q9NRZ7 376 aa16.13■□□□□ 0.17
ATG4B-220ENST00000482507 RBBP6Q7Z6E9 1792 aaKnown RBP16.13■□□□□ 0.17
ATG4B-220ENST00000482507 FRMPD4Q14CM0 1322 aa16.13■□□□□ 0.17
ATG4B-220ENST00000482507 A6NNZ2 444 aa16.13■□□□□ 0.17
ATG4B-220ENST00000482507 FGGP02679 453 aa16.13■□□□□ 0.17
ATG4B-220ENST00000482507 PDE4CQ08493 712 aa16.13■□□□□ 0.17
ATG4B-220ENST00000482507 PPP2R5CQ13362 524 aa16.13■□□□□ 0.17
ATG4B-220ENST00000482507 TUBB8Q3ZCM7 444 aa16.13■□□□□ 0.17
ATG4B-220ENST00000482507 MAP1SQ66K74 1059 aaPredicted RBP16.13■□□□□ 0.17
ATG4B-220ENST00000482507 USP50Q70EL3 339 aaPredicted RBP16.13■□□□□ 0.17
ATG4B-220ENST00000482507 MOB2Q70IA6 237 aa16.13■□□□□ 0.17
ATG4B-220ENST00000482507 SLC5A5Q92911 643 aa16.13■□□□□ 0.17
ATG4B-220ENST00000482507 WRNIP1Q96S55 665 aa16.13■□□□□ 0.17
ATG4B-220ENST00000482507 INTS2Q9H0H0 1204 aaKnown RBP16.13■□□□□ 0.17
ATG4B-220ENST00000482507 DPH5Q9H2P9 285 aa16.13■□□□□ 0.17
ATG4B-220ENST00000482507 COG5Q9UP83 839 aa16.13■□□□□ 0.17
ATG4B-220ENST00000482507 TMEM253P0C7T8 217 aa16.12■□□□□ 0.17
ATG4B-220ENST00000482507 CTNNA1P35221 906 aaKnown RBP16.12■□□□□ 0.17
ATG4B-220ENST00000482507 ZNF131P52739 623 aa16.12■□□□□ 0.17
ATG4B-220ENST00000482507 PHLDB3Q6NSJ2 640 aa16.12■□□□□ 0.17
ATG4B-220ENST00000482507 SYCE1Q8N0S2 351 aa16.12■□□□□ 0.17
ATG4B-220ENST00000482507 ATP8B4Q8TF62 1192 aa16.12■□□□□ 0.17
ATG4B-220ENST00000482507 ZNF473Q8WTR7 871 aaKnown RBP16.12■□□□□ 0.17
ATG4B-220ENST00000482507 FAM107BQ9H098 131 aa16.12■□□□□ 0.17
ATG4B-220ENST00000482507 AMFRQ9UKV5 643 aa16.12■□□□□ 0.17
ATG4B-220ENST00000482507 DCDC2CA8MYV0 355 aa16.11■□□□□ 0.17
ATG4B-220ENST00000482507 TMC3Q7Z5M5 1100 aa16.11■□□□□ 0.17
ATG4B-220ENST00000482507 ADAT2Q7Z6V5 191 aaKnown RBP16.11■□□□□ 0.17
ATG4B-220ENST00000482507 MYCBPAPQ8TBZ2 947 aa16.11■□□□□ 0.17
ATG4B-220ENST00000482507 UBLCP1Q8WVY7 318 aaPredicted RBP16.11■□□□□ 0.17
ATG4B-220ENST00000482507 RFFLQ8WZ73 363 aa16.11■□□□□ 0.17
ATG4B-220ENST00000482507 CCT8L2Q96SF2 557 aa16.11■□□□□ 0.17
ATG4B-220ENST00000482507 THAP2Q9H0W7 228 aa16.11■□□□□ 0.17
ATG4B-220ENST00000482507 SLITRK6Q9H5Y7 841 aa16.11■□□□□ 0.17
ATG4B-220ENST00000482507 POLR2AP24928 1970 aaKnown RBP16.11■□□□□ 0.17
ATG4B-220ENST00000482507 IQCA1LA6NCM1 817 aa16.11■□□□□ 0.17
ATG4B-220ENST00000482507 GCOM1H8Y6P7 765 aaPredicted RBP16.11■□□□□ 0.17
ATG4B-220ENST00000482507 MYZAPP0CAP1 466 aa16.11■□□□□ 0.17
ATG4B-220ENST00000482507 ARP10275 920 aa16.11■□□□□ 0.17
ATG4B-220ENST00000482507 PLS1Q14651 629 aa16.11■□□□□ 0.17
ATG4B-220ENST00000482507 ARHGAP44Q17R89 818 aa16.11■□□□□ 0.17
ATG4B-220ENST00000482507 CCDC174Q6PII3 467 aa16.11■□□□□ 0.17
ATG4B-220ENST00000482507 NLRP14Q86W24 1093 aa16.11■□□□□ 0.17
ATG4B-220ENST00000482507 FAM178BQ8IXR5 827 aa16.11■□□□□ 0.17
ATG4B-220ENST00000482507 DAW1Q8N136 415 aa16.11■□□□□ 0.17
ATG4B-220ENST00000482507 RDH13Q8NBN7 331 aa16.11■□□□□ 0.17
ATG4B-220ENST00000482507 LMO3Q8TAP4 145 aa16.11■□□□□ 0.17
ATG4B-220ENST00000482507 LRRC45Q96CN5 670 aa16.11■□□□□ 0.17
ATG4B-220ENST00000482507 MKNK1Q9BUB5 465 aa16.11■□□□□ 0.17
ATG4B-220ENST00000482507 UNC45AQ9H3U1 944 aa16.11■□□□□ 0.17
ATG4B-220ENST00000482507 ERVK-5Q9HDB9 667 aa16.11■□□□□ 0.17
ATG4B-220ENST00000482507 NMRK2Q9NPI5 230 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms