RNA–Protein interactions for RNA: ENST00000482251.2

CPSF4-212, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-212ENST00000482251 OR52Z1P0C646 297 aa11.67□□□□□ -0.54
CPSF4-212ENST00000482251 TECP42680 631 aa11.67□□□□□ -0.54
CPSF4-212ENST00000482251 HMGN5P82970 282 aaKnown RBP11.67□□□□□ -0.54
CPSF4-212ENST00000482251 CDC42EP1Q00587 391 aa11.67□□□□□ -0.54
CPSF4-212ENST00000482251 TTC38Q5R3I4 469 aa11.67□□□□□ -0.54
CPSF4-212ENST00000482251 POTEGQ6S5H5 508 aa11.67□□□□□ -0.54
CPSF4-212ENST00000482251 FAM178BQ8IXR5 827 aa11.67□□□□□ -0.54
CPSF4-212ENST00000482251 ASAP3Q8TDY4 903 aa11.67□□□□□ -0.54
CPSF4-212ENST00000482251 TCP11Q8WWU5 503 aa11.67□□□□□ -0.54
CPSF4-212ENST00000482251 ZSCAN31Q96LW9 406 aaPredicted RBP11.67□□□□□ -0.54
CPSF4-212ENST00000482251 HSD17B14Q9BPX1 270 aa11.67□□□□□ -0.54
CPSF4-212ENST00000482251 TCF25Q9BQ70 676 aa11.67□□□□□ -0.54
CPSF4-212ENST00000482251 EPHX3Q9H6B9 360 aa11.67□□□□□ -0.54
CPSF4-212ENST00000482251 TLE6Q9H808 572 aa11.67□□□□□ -0.54
CPSF4-212ENST00000482251 RAPGEFL1Q9UHV5 662 aa11.67□□□□□ -0.54
CPSF4-212ENST00000482251 PPME1Q9Y570 386 aa11.67□□□□□ -0.54
CPSF4-212ENST00000482251 NCK2O43639 380 aa11.66□□□□□ -0.54
CPSF4-212ENST00000482251 MED24O75448 989 aa11.66□□□□□ -0.54
CPSF4-212ENST00000482251 ERLIN2O94905 339 aa11.66□□□□□ -0.54
CPSF4-212ENST00000482251 CD2BP2O95400 341 aaKnown RBP11.66□□□□□ -0.54
CPSF4-212ENST00000482251 EOMESO95936 686 aa11.66□□□□□ -0.54
CPSF4-212ENST00000482251 RBM25P49756 843 aaKnown RBP11.66□□□□□ -0.54
CPSF4-212ENST00000482251 RARRES1P49788 294 aa11.66□□□□□ -0.54
CPSF4-212ENST00000482251 UBE3AQ05086 875 aa11.66□□□□□ -0.54
CPSF4-212ENST00000482251 ADAM15Q13444 863 aa11.66□□□□□ -0.54
CPSF4-212ENST00000482251 CAPSQ13938 189 aa11.66□□□□□ -0.54
CPSF4-212ENST00000482251 CSPP1Q1MSJ5 1256 aa11.66□□□□□ -0.54
CPSF4-212ENST00000482251 LLGL2Q6P1M3 1020 aa11.66□□□□□ -0.54
CPSF4-212ENST00000482251 FAM43BQ6ZT52 329 aaPredicted RBP11.66□□□□□ -0.54
CPSF4-212ENST00000482251 TMEM173Q86WV6 379 aaPredicted RBP11.66□□□□□ -0.54
CPSF4-212ENST00000482251 NOSTRINQ8IVI9 506 aa11.66□□□□□ -0.54
CPSF4-212ENST00000482251 GJD3Q8N144 294 aa11.66□□□□□ -0.54
CPSF4-212ENST00000482251 FBXO18Q8NFZ0 1043 aa11.66□□□□□ -0.54
CPSF4-212ENST00000482251 VN1R2Q8NFZ6 395 aa11.66□□□□□ -0.54
CPSF4-212ENST00000482251 MRPS27Q92552 414 aaKnown RBP11.66□□□□□ -0.54
CPSF4-212ENST00000482251 CPB2Q96IY4 423 aa11.66□□□□□ -0.54
CPSF4-212ENST00000482251 MRPL9Q9BYD2 267 aaKnown RBP11.66□□□□□ -0.54
CPSF4-212ENST00000482251 POLR3FQ9H1D9 316 aaPredicted RBP11.66□□□□□ -0.54
CPSF4-212ENST00000482251 FOXP1Q9H334 677 aaPredicted RBP11.66□□□□□ -0.54
CPSF4-212ENST00000482251 GPRC5CQ9NQ84 441 aa11.66□□□□□ -0.54
CPSF4-212ENST00000482251 CHST12Q9NRB3 414 aa11.66□□□□□ -0.54
CPSF4-212ENST00000482251 CLEC1BQ9P126 229 aa11.66□□□□□ -0.54
CPSF4-212ENST00000482251 CD207Q9UJ71 328 aa11.66□□□□□ -0.54
CPSF4-212ENST00000482251 PCDHB2Q9Y5E7 798 aa11.66□□□□□ -0.54
CPSF4-212ENST00000482251 HIDE1A8MVS5 230 aa11.65□□□□□ -0.54
CPSF4-212ENST00000482251 INO80B-WBP1J3KQ70 363 aa11.65□□□□□ -0.54
CPSF4-212ENST00000482251 FSCN2O14926 492 aa11.65□□□□□ -0.54
CPSF4-212ENST00000482251 MBTPS2O43462 519 aa11.65□□□□□ -0.54
CPSF4-212ENST00000482251 GAS2O43903 313 aaKnown RBP11.65□□□□□ -0.54
CPSF4-212ENST00000482251 B4GALT3O60512 393 aa11.65□□□□□ -0.54
CPSF4-212ENST00000482251 TSPAN1O60635 241 aa11.65□□□□□ -0.54
CPSF4-212ENST00000482251 DGAT1O75907 488 aa11.65□□□□□ -0.54
CPSF4-212ENST00000482251 LYPLA2O95372 231 aa11.65□□□□□ -0.54
CPSF4-212ENST00000482251 SPATA31C1P0DKV0 1188 aa11.65□□□□□ -0.54
CPSF4-212ENST00000482251 PPM1AP35813 382 aa11.65□□□□□ -0.54
CPSF4-212ENST00000482251 RAB27AP51159 221 aa11.65□□□□□ -0.54
CPSF4-212ENST00000482251 AFF1P51825 1210 aaKnown RBP11.65□□□□□ -0.54
CPSF4-212ENST00000482251 BCAR1P56945 870 aa11.65□□□□□ -0.54
CPSF4-212ENST00000482251 RNASELQ05823 741 aaKnown RBP11.65□□□□□ -0.54
CPSF4-212ENST00000482251 ZP2Q05996 745 aa11.65□□□□□ -0.54
CPSF4-212ENST00000482251 SMAD4Q13485 552 aaKnown RBP11.65□□□□□ -0.54
CPSF4-212ENST00000482251 RABEP1Q15276 862 aa11.65□□□□□ -0.54
CPSF4-212ENST00000482251 PUS10Q3MIT2 529 aaKnown RBP11.65□□□□□ -0.54
CPSF4-212ENST00000482251 GLB1LQ6UWU2 654 aa11.65□□□□□ -0.54
CPSF4-212ENST00000482251 SRGAP1Q7Z6B7 1085 aa11.65□□□□□ -0.54
CPSF4-212ENST00000482251 CDR2LQ86X02 465 aaPredicted RBP11.65□□□□□ -0.54
CPSF4-212ENST00000482251 CATSPER3Q86XQ3 398 aa11.65□□□□□ -0.54
CPSF4-212ENST00000482251 EXOC8Q8IYI6 725 aa11.65□□□□□ -0.54
CPSF4-212ENST00000482251 SLC39A11Q8N1S5 342 aa11.65□□□□□ -0.54
CPSF4-212ENST00000482251 EFHBQ8N7U6 833 aa11.65□□□□□ -0.54
CPSF4-212ENST00000482251 APOL6Q9BWW8 343 aa11.65□□□□□ -0.54
CPSF4-212ENST00000482251 APOL5Q9BWW9 433 aa11.65□□□□□ -0.54
CPSF4-212ENST00000482251 EIF2AQ9BY44 585 aaKnown RBP11.65□□□□□ -0.54
CPSF4-212ENST00000482251 ANKEF1Q9NU02 776 aa11.65□□□□□ -0.54
CPSF4-212ENST00000482251 TBC1D13Q9NVG8 400 aa11.65□□□□□ -0.54
CPSF4-212ENST00000482251 SPG21Q9NZD8 308 aa11.65□□□□□ -0.54
CPSF4-212ENST00000482251 DNAJB4Q9UDY4 337 aa11.65□□□□□ -0.54
CPSF4-212ENST00000482251 FAM50BQ9Y247 325 aa11.65□□□□□ -0.54
CPSF4-212ENST00000482251 BDP1A6H8Y1 2624 aa11.65□□□□□ -0.54
CPSF4-212ENST00000482251 LRRIQ4A6NIV6 560 aa11.64□□□□□ -0.55
CPSF4-212ENST00000482251 B4GALT5O43286 388 aa11.64□□□□□ -0.55
CPSF4-212ENST00000482251 ST18O60284 1047 aa11.64□□□□□ -0.55
CPSF4-212ENST00000482251 SKIP12755 728 aa11.64□□□□□ -0.55
CPSF4-212ENST00000482251 COL9A1P20849 921 aa11.64□□□□□ -0.55
CPSF4-212ENST00000482251 GLRA2P23416 452 aa11.64□□□□□ -0.55
CPSF4-212ENST00000482251 HOXA11P31270 313 aaPredicted RBP11.64□□□□□ -0.55
CPSF4-212ENST00000482251 ALDH7A1P49419 539 aaKnown RBP11.64□□□□□ -0.55
CPSF4-212ENST00000482251 PLCB3Q01970 1234 aa11.64□□□□□ -0.55
CPSF4-212ENST00000482251 KRT17Q04695 432 aa11.64□□□□□ -0.55
CPSF4-212ENST00000482251 MBTD1Q05BQ5 628 aa11.64□□□□□ -0.55
CPSF4-212ENST00000482251 TFDP1Q14186 410 aa11.64□□□□□ -0.55
CPSF4-212ENST00000482251 DUSP6Q16828 381 aa11.64□□□□□ -0.55
CPSF4-212ENST00000482251 NOMO2Q5JPE7 1267 aa11.64□□□□□ -0.55
CPSF4-212ENST00000482251 UBXN11Q5T124 520 aa11.64□□□□□ -0.55
CPSF4-212ENST00000482251 AGMOQ6ZNB7 445 aa11.64□□□□□ -0.55
CPSF4-212ENST00000482251 TMC7Q7Z402 723 aa11.64□□□□□ -0.55
CPSF4-212ENST00000482251 BCL7CQ8WUZ0 217 aaPredicted RBP11.64□□□□□ -0.55
CPSF4-212ENST00000482251 AUTS2Q8WXX7 1259 aa11.64□□□□□ -0.55
CPSF4-212ENST00000482251 MSLNLQ96KJ4 702 aa11.64□□□□□ -0.55
CPSF4-212ENST00000482251 TRAIPQ9BWF2 469 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms