RNA–Protein interactions for RNA: ENST00000481409.1

USP39-215, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-215ENST00000481409 ENPEPQ07075 957 aa11.17□□□□□ -0.62
USP39-215ENST00000481409 LAMTOR4Q0VGL1 99 aa11.17□□□□□ -0.62
USP39-215ENST00000481409 NCAPHQ15003 741 aa11.17□□□□□ -0.62
USP39-215ENST00000481409 FAM187BQ17R55 369 aa11.17□□□□□ -0.62
USP39-215ENST00000481409 MARCH8Q5T0T0 291 aa11.17□□□□□ -0.62
USP39-215ENST00000481409 SARM1Q6SZW1 724 aa11.17□□□□□ -0.62
USP39-215ENST00000481409 SRGAP1Q7Z6B7 1085 aa11.17□□□□□ -0.62
USP39-215ENST00000481409 LUZP1Q86V48 1076 aa11.17□□□□□ -0.62
USP39-215ENST00000481409 ZC3H3Q8IXZ2 948 aaKnown RBP11.17□□□□□ -0.62
USP39-215ENST00000481409 CSGALNACT2Q8N6G5 542 aa11.17□□□□□ -0.62
USP39-215ENST00000481409 METTL13Q8N6R0 699 aa11.17□□□□□ -0.62
USP39-215ENST00000481409 ANKLE1Q8NAG6 615 aa11.17□□□□□ -0.62
USP39-215ENST00000481409 RNF214Q8ND24 703 aa11.17□□□□□ -0.62
USP39-215ENST00000481409 SH3TC2Q8TF17 1288 aa11.17□□□□□ -0.62
USP39-215ENST00000481409 ZNF333Q96JL9 665 aa11.17□□□□□ -0.62
USP39-215ENST00000481409 PRIMPOLQ96LW4 560 aa11.17□□□□□ -0.62
USP39-215ENST00000481409 MKNK1Q9BUB5 465 aa11.17□□□□□ -0.62
USP39-215ENST00000481409 GPRC5CQ9NQ84 441 aa11.17□□□□□ -0.62
USP39-215ENST00000481409 TBC1D7Q9P0N9 293 aa11.17□□□□□ -0.62
USP39-215ENST00000481409 TBX20Q9UMR3 447 aa11.17□□□□□ -0.62
USP39-215ENST00000481409 A0A0U1RQG5 324 aaPredicted RBP11.16□□□□□ -0.62
USP39-215ENST00000481409 DENND3A2RUS2 1198 aa11.16□□□□□ -0.62
USP39-215ENST00000481409 LRRC10BA6NIK2 292 aa11.16□□□□□ -0.62
USP39-215ENST00000481409 LRRIQ4A6NIV6 560 aa11.16□□□□□ -0.62
USP39-215ENST00000481409 CETN3O15182 167 aa11.16□□□□□ -0.62
USP39-215ENST00000481409 MAPK13O15264 365 aa11.16□□□□□ -0.62
USP39-215ENST00000481409 SLC16A4O15374 487 aa11.16□□□□□ -0.62
USP39-215ENST00000481409 TPM3P06753 285 aa11.16□□□□□ -0.62
USP39-215ENST00000481409 TPM2P07951 284 aa11.16□□□□□ -0.62
USP39-215ENST00000481409 GJB1P08034 283 aa11.16□□□□□ -0.62
USP39-215ENST00000481409 CYP2C9P11712 490 aa11.16□□□□□ -0.62
USP39-215ENST00000481409 CCL5P13501 91 aa11.16□□□□□ -0.62
USP39-215ENST00000481409 ZNF18P17022 549 aa11.16□□□□□ -0.62
USP39-215ENST00000481409 CASP5P51878 434 aa11.16□□□□□ -0.62
USP39-215ENST00000481409 LBX1P52954 281 aa11.16□□□□□ -0.62
USP39-215ENST00000481409 MARSP56192 900 aaKnown RBP11.16□□□□□ -0.62
USP39-215ENST00000481409 PTENP60484 403 aa11.16□□□□□ -0.62
USP39-215ENST00000481409 IGBP1P78318 339 aa11.16□□□□□ -0.62
USP39-215ENST00000481409 PPP2R3AQ06190 1150 aa11.16□□□□□ -0.62
USP39-215ENST00000481409 MKRN4PQ13434 485 aaPredicted RBP11.16□□□□□ -0.62
USP39-215ENST00000481409 ITGA7Q13683 1181 aa11.16□□□□□ -0.62
USP39-215ENST00000481409 CAPSQ13938 189 aa11.16□□□□□ -0.62
USP39-215ENST00000481409 MAPK6Q16659 721 aa11.16□□□□□ -0.62
USP39-215ENST00000481409 NBPF20Q3BBV1 942 aa11.16□□□□□ -0.62
USP39-215ENST00000481409 CDKAL1Q5VV42 579 aa11.16□□□□□ -0.62
USP39-215ENST00000481409 ANKRD40Q6AI12 368 aa11.16□□□□□ -0.62
USP39-215ENST00000481409 SLFN12LQ6IEE8 588 aa11.16□□□□□ -0.62
USP39-215ENST00000481409 CXCL17Q6UXB2 119 aa11.16□□□□□ -0.62
USP39-215ENST00000481409 ZPBP2Q6X784 338 aa11.16□□□□□ -0.62
USP39-215ENST00000481409 FILIP1Q7Z7B0 1213 aa11.16□□□□□ -0.62
USP39-215ENST00000481409 SYCP3Q8IZU3 236 aa11.16□□□□□ -0.62
USP39-215ENST00000481409 SLC43A3Q8NBI5 491 aa11.16□□□□□ -0.62
USP39-215ENST00000481409 ASAP3Q8TDY4 903 aa11.16□□□□□ -0.62
USP39-215ENST00000481409 HPS3Q969F9 1004 aa11.16□□□□□ -0.62
USP39-215ENST00000481409 CRISPLD2Q9H0B8 497 aa11.16□□□□□ -0.62
USP39-215ENST00000481409 RNF208Q9H0X6 261 aa11.16□□□□□ -0.62
USP39-215ENST00000481409 UNC93B1Q9H1C4 597 aa11.16□□□□□ -0.62
USP39-215ENST00000481409 SEMA6BQ9H3T3 888 aa11.16□□□□□ -0.62
USP39-215ENST00000481409 METTL14Q9HCE5 456 aaKnown RBP11.16□□□□□ -0.62
USP39-215ENST00000481409 SETD4Q9NVD3 440 aa11.16□□□□□ -0.62
USP39-215ENST00000481409 PRMT7Q9NVM4 692 aaPredicted RBP11.16□□□□□ -0.62
USP39-215ENST00000481409 MAGEC2Q9UBF1 373 aaPredicted RBP11.16□□□□□ -0.62
USP39-215ENST00000481409 HDAC6Q9UBN7 1215 aa11.16□□□□□ -0.62
USP39-215ENST00000481409 MAPK8IP1Q9UQF2 711 aa11.16□□□□□ -0.62
USP39-215ENST00000481409 AKT3Q9Y243 479 aa11.16□□□□□ -0.62
USP39-215ENST00000481409 SIP14410 1827 aa11.16□□□□□ -0.62
USP39-215ENST00000481409 MROH7Q68CQ1 1323 aa11.15□□□□□ -0.62
USP39-215ENST00000481409 M0QZ92 97 aa11.15□□□□□ -0.62
USP39-215ENST00000481409 SLC16A3O15427 465 aaKnown RBP11.15□□□□□ -0.62
USP39-215ENST00000481409 CBFA2T2O43439 604 aa11.15□□□□□ -0.62
USP39-215ENST00000481409 PRPF6O94906 941 aaKnown RBP11.15□□□□□ -0.62
USP39-215ENST00000481409 CDK11BP21127 795 aaKnown RBP11.15□□□□□ -0.62
USP39-215ENST00000481409 GARTP22102 1010 aa11.15□□□□□ -0.62
USP39-215ENST00000481409 CLCN3P51790 818 aa11.15□□□□□ -0.62
USP39-215ENST00000481409 POU5F1Q01860 360 aaKnown RBP11.15□□□□□ -0.62
USP39-215ENST00000481409 NCBP1Q09161 790 aaKnown RBP11.15□□□□□ -0.62
USP39-215ENST00000481409 PTK7Q13308 1070 aa11.15□□□□□ -0.62
USP39-215ENST00000481409 KYAT1Q16773 422 aa11.15□□□□□ -0.62
USP39-215ENST00000481409 APBB1IPQ7Z5R6 666 aaPredicted RBP11.15□□□□□ -0.62
USP39-215ENST00000481409 SERINC5Q86VE9 423 aa11.15□□□□□ -0.62
USP39-215ENST00000481409 RHPN2Q8IUC4 686 aa11.15□□□□□ -0.62
USP39-215ENST00000481409 KIAA0319LQ8IZA0 1049 aa11.15□□□□□ -0.62
USP39-215ENST00000481409 LRRC71Q8N4P6 559 aa11.15□□□□□ -0.62
USP39-215ENST00000481409 RNF149Q8NC42 400 aa11.15□□□□□ -0.62
USP39-215ENST00000481409 TRAPPC12Q8WVT3 735 aa11.15□□□□□ -0.62
USP39-215ENST00000481409 BSNDQ8WZ55 320 aa11.15□□□□□ -0.62
USP39-215ENST00000481409 DUSP9Q99956 384 aaKnown RBP11.15□□□□□ -0.62
USP39-215ENST00000481409 MRPL4Q9BYD3 311 aaKnown RBP11.15□□□□□ -0.62
USP39-215ENST00000481409 GCOM2Q9BZD3 368 aaPredicted RBP11.15□□□□□ -0.62
USP39-215ENST00000481409 KIAA1586Q9HCI6 787 aa11.15□□□□□ -0.62
USP39-215ENST00000481409 STARD7Q9NQZ5 370 aa11.15□□□□□ -0.62
USP39-215ENST00000481409 FANCLQ9NW38 375 aa11.15□□□□□ -0.62
USP39-215ENST00000481409 EVPLQ92817 2033 aa11.14□□□□□ -0.63
USP39-215ENST00000481409 A0A1W2PQ45 241 aaPredicted RBP11.14□□□□□ -0.63
USP39-215ENST00000481409 A0A1W2PQY0 241 aa11.14□□□□□ -0.63
USP39-215ENST00000481409 ACKR2O00590 384 aa11.14□□□□□ -0.63
USP39-215ENST00000481409 TGFB1I1O43294 461 aa11.14□□□□□ -0.63
USP39-215ENST00000481409 SGPL1O95470 568 aa11.14□□□□□ -0.63
USP39-215ENST00000481409 LDHAP00338 332 aaKnown RBP11.14□□□□□ -0.63
USP39-215ENST00000481409 AXLP30530 894 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms