RNA–Protein interactions for RNA: ENST00000481242.5

GARNL3-216, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 4,816 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-216ENST00000481242 PCDHA13Q9Y5I0 950 aa10.13□□□□□ -0.79
GARNL3-216ENST00000481242 GGPS1O95749 300 aa10.13□□□□□ -0.79
GARNL3-216ENST00000481242 GCLCP48506 637 aaPredicted RBP10.13□□□□□ -0.79
GARNL3-216ENST00000481242 HNRNPH2P55795 449 aaKnown RBP10.13□□□□□ -0.79
GARNL3-216ENST00000481242 BAATQ14032 418 aaPredicted RBP10.13□□□□□ -0.79
GARNL3-216ENST00000481242 VCX3AQ9NNX9 186 aa10.13□□□□□ -0.79
GARNL3-216ENST00000481242 MORC2Q9Y6X9 1032 aaPredicted RBP10.13□□□□□ -0.79
GARNL3-216ENST00000481242 ZNF18P17022 549 aa10.13□□□□□ -0.79
GARNL3-216ENST00000481242 EXOSC10Q01780 885 aaKnown RBP10.13□□□□□ -0.79
GARNL3-216ENST00000481242 KCNH2Q12809 1159 aa10.13□□□□□ -0.79
GARNL3-216ENST00000481242 NAA35Q5VZE5 725 aa10.13□□□□□ -0.79
GARNL3-216ENST00000481242 FRMD5Q7Z6J6 570 aa10.13□□□□□ -0.79
GARNL3-216ENST00000481242 ADAT2Q7Z6V5 191 aaKnown RBP10.13□□□□□ -0.79
GARNL3-216ENST00000481242 SCN4BQ8IWT1 228 aa10.13□□□□□ -0.79
GARNL3-216ENST00000481242 ARMC2Q8NEN0 867 aa10.13□□□□□ -0.79
GARNL3-216ENST00000481242 SUFUQ9UMX1 484 aa10.13□□□□□ -0.79
GARNL3-216ENST00000481242 UBE4BO95155 1302 aa10.13□□□□□ -0.79
GARNL3-216ENST00000481242 CCL15-CCL14A0A0B4J2E2 113 aa10.13□□□□□ -0.79
GARNL3-216ENST00000481242 SFI1A8K8P3 1242 aa10.13□□□□□ -0.79
GARNL3-216ENST00000481242 MFAP3LO75121 409 aa10.13□□□□□ -0.79
GARNL3-216ENST00000481242 GTF2A2P52657 109 aa10.13□□□□□ -0.79
GARNL3-216ENST00000481242 BASP1P80723 227 aaKnown RBP10.13□□□□□ -0.79
GARNL3-216ENST00000481242 CCL15Q16663 113 aa10.13□□□□□ -0.79
GARNL3-216ENST00000481242 NBPF9Q3BBW0 867 aa10.13□□□□□ -0.79
GARNL3-216ENST00000481242 LRRC23Q53EV4 343 aaPredicted RBP10.13□□□□□ -0.79
GARNL3-216ENST00000481242 RNF10Q8N5U6 811 aaKnown RBP10.13□□□□□ -0.79
GARNL3-216ENST00000481242 EFHBQ8N7U6 833 aa10.13□□□□□ -0.79
GARNL3-216ENST00000481242 FBXL13Q8NEE6 735 aa10.13□□□□□ -0.79
GARNL3-216ENST00000481242 WHAMMQ8TF30 809 aa10.13□□□□□ -0.79
GARNL3-216ENST00000481242 PPP1R16BQ96T49 567 aa10.13□□□□□ -0.79
GARNL3-216ENST00000481242 UBN1Q9NPG3 1134 aa10.13□□□□□ -0.79
GARNL3-216ENST00000481242 CYP26B1Q9NR63 512 aa10.13□□□□□ -0.79
GARNL3-216ENST00000481242 RBAKQ9NYW8 714 aaPredicted RBP10.13□□□□□ -0.79
GARNL3-216ENST00000481242 CNOT8Q9UFF9 292 aaKnown RBP10.13□□□□□ -0.79
GARNL3-216ENST00000481242 PRR12Q9ULL5 1215 aa10.13□□□□□ -0.79
GARNL3-216ENST00000481242 MYCP01106 439 aaPredicted RBP10.12□□□□□ -0.79
GARNL3-216ENST00000481242 APOEP02649 317 aa10.12□□□□□ -0.79
GARNL3-216ENST00000481242 PMLP29590 882 aa10.12□□□□□ -0.79
GARNL3-216ENST00000481242 CDC27P30260 824 aa10.12□□□□□ -0.79
GARNL3-216ENST00000481242 PHLDB3Q6NSJ2 640 aa10.12□□□□□ -0.79
GARNL3-216ENST00000481242 CENPUQ71F23 418 aa10.12□□□□□ -0.79
GARNL3-216ENST00000481242 PCGF5Q86SE9 256 aa10.12□□□□□ -0.79
GARNL3-216ENST00000481242 CPVLQ9H3G5 476 aa10.12□□□□□ -0.79
GARNL3-216ENST00000481242 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.12□□□□□ -0.79
GARNL3-216ENST00000481242 SLC38A7Q9NVC3 462 aa10.12□□□□□ -0.79
GARNL3-216ENST00000481242 RALAP11233 206 aa10.12□□□□□ -0.79
GARNL3-216ENST00000481242 GCLMP48507 274 aa10.12□□□□□ -0.79
GARNL3-216ENST00000481242 PAPOLAP51003 745 aaKnown RBP10.12□□□□□ -0.79
GARNL3-216ENST00000481242 CAV1Q03135 178 aa10.12□□□□□ -0.79
GARNL3-216ENST00000481242 GLE1Q53GS7 698 aaKnown RBP10.12□□□□□ -0.79
GARNL3-216ENST00000481242 NXNQ6DKJ4 435 aa10.12□□□□□ -0.79
GARNL3-216ENST00000481242 KLC3Q6P597 504 aa10.12□□□□□ -0.79
GARNL3-216ENST00000481242 SCYL3Q8IZE3 742 aa10.12□□□□□ -0.79
GARNL3-216ENST00000481242 LBHD1Q9BQE6 289 aaPredicted RBP10.12□□□□□ -0.79
GARNL3-216ENST00000481242 PIDD1Q9HB75 910 aa10.12□□□□□ -0.79
GARNL3-216ENST00000481242 GDAQ9Y2T3 454 aa10.12□□□□□ -0.79
GARNL3-216ENST00000481242 ANO9A1A5B4 782 aa10.12□□□□□ -0.79
GARNL3-216ENST00000481242 POTEFA5A3E0 1075 aa10.12□□□□□ -0.79
GARNL3-216ENST00000481242 POTEIP0CG38 1075 aa10.12□□□□□ -0.79
GARNL3-216ENST00000481242 ZFXP17010 805 aaPredicted RBP10.12□□□□□ -0.79
GARNL3-216ENST00000481242 YWHABP31946 246 aaKnown RBP10.12□□□□□ -0.79
GARNL3-216ENST00000481242 DRP2Q13474 957 aa10.12□□□□□ -0.79
GARNL3-216ENST00000481242 CUL1Q13616 776 aa10.12□□□□□ -0.79
GARNL3-216ENST00000481242 POTEGQ6S5H5 508 aa10.12□□□□□ -0.79
GARNL3-216ENST00000481242 POTEEQ6S8J3 1075 aa10.12□□□□□ -0.79
GARNL3-216ENST00000481242 TMEM270Q6UE05 265 aa10.12□□□□□ -0.79
GARNL3-216ENST00000481242 PARD3BQ8TEW8 1205 aa10.12□□□□□ -0.79
GARNL3-216ENST00000481242 ZC3H15Q8WU90 426 aaKnown RBP10.12□□□□□ -0.79
GARNL3-216ENST00000481242 HVCN1Q96D96 273 aa10.12□□□□□ -0.79
GARNL3-216ENST00000481242 DTNBP1Q96EV8 351 aa10.12□□□□□ -0.79
GARNL3-216ENST00000481242 ADARB2Q9NS39 739 aaKnown RBP10.12□□□□□ -0.79
GARNL3-216ENST00000481242 CASQ2O14958 399 aaPredicted RBP10.12□□□□□ -0.79
GARNL3-216ENST00000481242 SLC16A3O15427 465 aaKnown RBP10.12□□□□□ -0.79
GARNL3-216ENST00000481242 HBP1O60381 514 aa10.12□□□□□ -0.79
GARNL3-216ENST00000481242 RARBP10826 455 aa10.12□□□□□ -0.79
GARNL3-216ENST00000481242 LAMC2Q13753 1193 aa10.12□□□□□ -0.79
GARNL3-216ENST00000481242 POLIQ9UNA4 740 aa10.12□□□□□ -0.79
GARNL3-216ENST00000481242 A0A1W2PQC6 194 aa10.11□□□□□ -0.79
GARNL3-216ENST00000481242 TDP2O95551 362 aa10.11□□□□□ -0.79
GARNL3-216ENST00000481242 PRKCBP05771 671 aa10.11□□□□□ -0.79
GARNL3-216ENST00000481242 KIAA1755Q5JYT7 1200 aa10.11□□□□□ -0.79
GARNL3-216ENST00000481242 ERO1BQ86YB8 467 aa10.11□□□□□ -0.79
GARNL3-216ENST00000481242 FMR1NBQ8N0W7 255 aaPredicted RBP10.11□□□□□ -0.79
GARNL3-216ENST00000481242 RNF149Q8NC42 400 aa10.11□□□□□ -0.79
GARNL3-216ENST00000481242 GDAP1Q8TB36 358 aa10.11□□□□□ -0.79
GARNL3-216ENST00000481242 TMEM260Q9NX78 707 aa10.11□□□□□ -0.79
GARNL3-216ENST00000481242 MT-ND3P03897 115 aa10.11□□□□□ -0.79
GARNL3-216ENST00000481242 RASA1P20936 1047 aa10.11□□□□□ -0.79
GARNL3-216ENST00000481242 SAT1P21673 171 aa10.11□□□□□ -0.79
GARNL3-216ENST00000481242 SRBD1Q8N5C6 995 aaKnown RBP10.11□□□□□ -0.79
GARNL3-216ENST00000481242 GANCQ8TET4 914 aa10.11□□□□□ -0.79
GARNL3-216ENST00000481242 ZMAT2Q96NC0 199 aaKnown RBP10.11□□□□□ -0.79
GARNL3-216ENST00000481242 WDR35Q9P2L0 1181 aa10.11□□□□□ -0.79
GARNL3-216ENST00000481242 SUCLA2Q9P2R7 463 aaPredicted RBP10.11□□□□□ -0.79
GARNL3-216ENST00000481242 ANAPC7Q9UJX3 599 aa10.11□□□□□ -0.79
GARNL3-216ENST00000481242 POC1B-GALNT4F8VUJ3 575 aa10.11□□□□□ -0.79
GARNL3-216ENST00000481242 SUN1O94901 812 aa10.11□□□□□ -0.79
GARNL3-216ENST00000481242 CD4P01730 458 aa10.11□□□□□ -0.79
GARNL3-216ENST00000481242 C6orf222P0C671 652 aaPredicted RBP10.11□□□□□ -0.79
GARNL3-216ENST00000481242 SKIP12755 728 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms