RNA–Protein interactions for RNA: ENST00000481116.5

ABCF3-215, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-215ENST00000481116 PLVAPQ9BX97 442 aa14.31□□□□□ -0.12
ABCF3-215ENST00000481116 TMEM117Q9H0C3 514 aa14.31□□□□□ -0.12
ABCF3-215ENST00000481116 AGPAT5Q9NUQ2 364 aa14.31□□□□□ -0.12
ABCF3-215ENST00000481116 DBR1Q9UK59 544 aaKnown RBP14.31□□□□□ -0.12
ABCF3-215ENST00000481116 KIAA1024Q9UPX6 916 aa14.31□□□□□ -0.12
ABCF3-215ENST00000481116 EOMESO95936 686 aa14.3□□□□□ -0.12
ABCF3-215ENST00000481116 HOXA11P31270 313 aaPredicted RBP14.3□□□□□ -0.12
ABCF3-215ENST00000481116 IRS1P35568 1242 aa14.3□□□□□ -0.12
ABCF3-215ENST00000481116 PBX3P40426 434 aa14.3□□□□□ -0.12
ABCF3-215ENST00000481116 PTENP60484 403 aa14.3□□□□□ -0.12
ABCF3-215ENST00000481116 PDIA5Q14554 519 aa14.3□□□□□ -0.12
ABCF3-215ENST00000481116 MXD4Q14582 209 aaPredicted RBP14.3□□□□□ -0.12
ABCF3-215ENST00000481116 HAUS3Q68CZ6 603 aa14.3□□□□□ -0.12
ABCF3-215ENST00000481116 ABI1Q8IZP0 508 aa14.3□□□□□ -0.12
ABCF3-215ENST00000481116 POF1BQ8WVV4 589 aa14.3□□□□□ -0.12
ABCF3-215ENST00000481116 P2RX5Q93086 422 aa14.3□□□□□ -0.12
ABCF3-215ENST00000481116 FAM105AQ9NUU6 356 aa14.3□□□□□ -0.12
ABCF3-215ENST00000481116 DDX19AQ9NUU7 478 aaKnown RBP14.3□□□□□ -0.12
ABCF3-215ENST00000481116 PCDHGC5Q9Y5F6 944 aa14.3□□□□□ -0.12
ABCF3-215ENST00000481116 VPS37CA5D8V6 355 aaPredicted RBP14.29□□□□□ -0.12
ABCF3-215ENST00000481116 ARHGEF35A5YM69 484 aa14.29□□□□□ -0.12
ABCF3-215ENST00000481116 E9PMD0 336 aa14.29□□□□□ -0.12
ABCF3-215ENST00000481116 INO80B-WBP1J3KQ70 363 aa14.29□□□□□ -0.12
ABCF3-215ENST00000481116 GTF2F1P35269 517 aaKnown RBP eCLIP14.29□□□□□ -0.12
ABCF3-215ENST00000481116 PRPHP41219 470 aa14.29□□□□□ -0.12
ABCF3-215ENST00000481116 ATP2C1P98194 919 aaPredicted RBP14.29□□□□□ -0.12
ABCF3-215ENST00000481116 MBTD1Q05BQ5 628 aa14.29□□□□□ -0.12
ABCF3-215ENST00000481116 TFDP1Q14186 410 aa14.29□□□□□ -0.12
ABCF3-215ENST00000481116 TIGD5Q53EQ6 642 aa14.29□□□□□ -0.12
ABCF3-215ENST00000481116 UBXN11Q5T124 520 aa14.29□□□□□ -0.12
ABCF3-215ENST00000481116 PADI6Q6TGC4 694 aa14.29□□□□□ -0.12
ABCF3-215ENST00000481116 DTHD1Q6ZMT9 781 aa14.29□□□□□ -0.12
ABCF3-215ENST00000481116 EP400NLQ6ZTU2 488 aa14.29□□□□□ -0.12
ABCF3-215ENST00000481116 BSNDQ8WZ55 320 aa14.29□□□□□ -0.12
ABCF3-215ENST00000481116 MMTAG2Q9BU76 263 aaKnown RBP14.29□□□□□ -0.12
ABCF3-215ENST00000481116 TRAIPQ9BWF2 469 aa14.29□□□□□ -0.12
ABCF3-215ENST00000481116 LMAN2LQ9H0V9 348 aa14.29□□□□□ -0.12
ABCF3-215ENST00000481116 BHMT2Q9H2M3 363 aa14.29□□□□□ -0.12
ABCF3-215ENST00000481116 NSUN3Q9H649 340 aaKnown RBP14.29□□□□□ -0.12
ABCF3-215ENST00000481116 COG5Q9UP83 839 aa14.29□□□□□ -0.12
ABCF3-215ENST00000481116 PCDHB12Q9Y5F1 795 aa14.29□□□□□ -0.12
ABCF3-215ENST00000481116 TRIP11Q15643 1979 aa14.29□□□□□ -0.12
ABCF3-215ENST00000481116 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.28□□□□□ -0.12
ABCF3-215ENST00000481116 VWA3AA6NCI4 1184 aa14.28□□□□□ -0.12
ABCF3-215ENST00000481116 LRRIQ4A6NIV6 560 aa14.28□□□□□ -0.12
ABCF3-215ENST00000481116 LAD1O00515 517 aa14.28□□□□□ -0.12
ABCF3-215ENST00000481116 B4GALT5O43286 388 aa14.28□□□□□ -0.12
ABCF3-215ENST00000481116 HOXA2O43364 376 aa14.28□□□□□ -0.12
ABCF3-215ENST00000481116 TSPAN1O60635 241 aa14.28□□□□□ -0.12
ABCF3-215ENST00000481116 FGF18O76093 207 aa14.28□□□□□ -0.12
ABCF3-215ENST00000481116 ERLIN2O94905 339 aa14.28□□□□□ -0.12
ABCF3-215ENST00000481116 MUTP22033 750 aa14.28□□□□□ -0.12
ABCF3-215ENST00000481116 HYAL1Q12794 435 aa14.28□□□□□ -0.12
ABCF3-215ENST00000481116 ZRSR1Q15695 479 aaKnown RBP14.28□□□□□ -0.12
ABCF3-215ENST00000481116 AMHR2Q16671 573 aa14.28□□□□□ -0.12
ABCF3-215ENST00000481116 NAALADL2Q58DX5 795 aa14.28□□□□□ -0.12
ABCF3-215ENST00000481116 KCNK18Q7Z418 384 aa14.28□□□□□ -0.12
ABCF3-215ENST00000481116 ADGRD2Q7Z7M1 963 aa14.28□□□□□ -0.12
ABCF3-215ENST00000481116 CDR2LQ86X02 465 aaPredicted RBP14.28□□□□□ -0.12
ABCF3-215ENST00000481116 IFNLR1Q8IU57 520 aaPredicted RBP14.28□□□□□ -0.12
ABCF3-215ENST00000481116 THNSL1Q8IYQ7 743 aa14.28□□□□□ -0.12
ABCF3-215ENST00000481116 PLIN2Q99541 437 aa14.28□□□□□ -0.12
ABCF3-215ENST00000481116 EIF2AQ9BY44 585 aaKnown RBP14.28□□□□□ -0.12
ABCF3-215ENST00000481116 RAB34Q9BZG1 259 aa14.28□□□□□ -0.12
ABCF3-215ENST00000481116 IGFLR1Q9H665 355 aa14.28□□□□□ -0.12
ABCF3-215ENST00000481116 UBE2ZQ9H832 354 aaPredicted RBP14.28□□□□□ -0.12
ABCF3-215ENST00000481116 AAASQ9NRG9 546 aa14.28□□□□□ -0.12
ABCF3-215ENST00000481116 INPP5FQ9Y2H2 1132 aa14.28□□□□□ -0.12
ABCF3-215ENST00000481116 PCDHB2Q9Y5E7 798 aa14.28□□□□□ -0.12
ABCF3-215ENST00000481116 NT5C1B-RDH14C9J2C7 533 aa14.27□□□□□ -0.13
ABCF3-215ENST00000481116 K7ELQ4 463 aaPredicted RBP14.27□□□□□ -0.13
ABCF3-215ENST00000481116 OFD1O75665 1012 aa14.27□□□□□ -0.13
ABCF3-215ENST00000481116 BMP1P13497 986 aa14.27□□□□□ -0.13
ABCF3-215ENST00000481116 LAG3P18627 525 aa14.27□□□□□ -0.13
ABCF3-215ENST00000481116 CYP11B2P19099 503 aa14.27□□□□□ -0.13
ABCF3-215ENST00000481116 AFF1P51825 1210 aaKnown RBP14.27□□□□□ -0.13
ABCF3-215ENST00000481116 POU5F1BQ06416 359 aa14.27□□□□□ -0.13
ABCF3-215ENST00000481116 KRT79Q5XKE5 535 aa14.27□□□□□ -0.13
ABCF3-215ENST00000481116 KCNT2Q6UVM3 1135 aa14.27□□□□□ -0.13
ABCF3-215ENST00000481116 AGMOQ6ZNB7 445 aa14.27□□□□□ -0.13
ABCF3-215ENST00000481116 LRRC43Q8N309 656 aa14.27□□□□□ -0.13
ABCF3-215ENST00000481116 SMG8Q8ND04 991 aaKnown RBP14.27□□□□□ -0.13
ABCF3-215ENST00000481116 MCPH1Q8NEM0 835 aa14.27□□□□□ -0.13
ABCF3-215ENST00000481116 NECAB3Q96P71 396 aaPredicted RBP14.27□□□□□ -0.13
ABCF3-215ENST00000481116 USP20Q9Y2K6 914 aa14.27□□□□□ -0.13
ABCF3-215ENST00000481116 TTLL13PA6NNM8 815 aa14.26□□□□□ -0.13
ABCF3-215ENST00000481116 LINC01565O15544 149 aa14.26□□□□□ -0.13
ABCF3-215ENST00000481116 ZNF623O75123 536 aa14.26□□□□□ -0.13
ABCF3-215ENST00000481116 SKIP12755 728 aa14.26□□□□□ -0.13
ABCF3-215ENST00000481116 ARF4P18085 180 aaPredicted RBP14.26□□□□□ -0.13
ABCF3-215ENST00000481116 SYT1P21579 422 aa14.26□□□□□ -0.13
ABCF3-215ENST00000481116 KCNA5P22460 613 aa14.26□□□□□ -0.13
ABCF3-215ENST00000481116 RAB27AP51159 221 aa14.26□□□□□ -0.13
ABCF3-215ENST00000481116 ERVFC1P60507 584 aa14.26□□□□□ -0.13
ABCF3-215ENST00000481116 FAM173BQ6P4H8 233 aa14.26□□□□□ -0.13
ABCF3-215ENST00000481116 MRPL10Q7Z7H8 261 aaKnown RBP14.26□□□□□ -0.13
ABCF3-215ENST00000481116 RBM23Q86U06 439 aaKnown RBP14.26□□□□□ -0.13
ABCF3-215ENST00000481116 ADAMTS19Q8TE59 1207 aa14.26□□□□□ -0.13
ABCF3-215ENST00000481116 SYMPKQ92797 1274 aaKnown RBP14.26□□□□□ -0.13
ABCF3-215ENST00000481116 ZNF558Q96NG5 402 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms