RNA–Protein interactions for RNA: ENST00000480923.5

VPS36-204, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 614 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-204ENST00000480923 LMAN2LQ9H0V9 348 aa22.35■■□□□ 1.17
VPS36-204ENST00000480923 ALG13Q9NP73 1137 aaKnown RBP22.35■■□□□ 1.17
VPS36-204ENST00000480923 PCDHB12Q9Y5F1 795 aa22.35■■□□□ 1.17
VPS36-204ENST00000480923 LRRIQ4A6NIV6 560 aa22.34■■□□□ 1.17
VPS36-204ENST00000480923 NCBP1Q09161 790 aaKnown RBP22.34■■□□□ 1.17
VPS36-204ENST00000480923 PCBP1Q15365 356 aaKnown RBP eCLIP22.34■■□□□ 1.17
VPS36-204ENST00000480923 LONRF3Q496Y0 759 aa22.34■■□□□ 1.17
VPS36-204ENST00000480923 CLLU1OSQ5K130 101 aa22.34■■□□□ 1.17
VPS36-204ENST00000480923 ARL6IP4Q66PJ3 421 aaKnown RBP22.34■■□□□ 1.17
VPS36-204ENST00000480923 IFNLR1Q8IU57 520 aaPredicted RBP22.34■■□□□ 1.17
VPS36-204ENST00000480923 HSCBQ8IWL3 235 aa22.34■■□□□ 1.17
VPS36-204ENST00000480923 LRRC43Q8N309 656 aa22.34■■□□□ 1.17
VPS36-204ENST00000480923 KLHL23Q8NBE8 558 aa22.34■■□□□ 1.17
VPS36-204ENST00000480923 MMTAG2Q9BU76 263 aaKnown RBP22.34■■□□□ 1.17
VPS36-204ENST00000480923 PLAGL2Q9UPG8 496 aa22.34■■□□□ 1.17
VPS36-204ENST00000480923 DNM3Q9UQ16 869 aa22.34■■□□□ 1.17
VPS36-204ENST00000480923 RALGAPA2Q2PPJ7 1873 aa22.33■■□□□ 1.17
VPS36-204ENST00000480923 PRRC2BQ5JSZ5 2229 aaKnown RBP22.33■■□□□ 1.17
VPS36-204ENST00000480923 E9PMD0 336 aa22.33■■□□□ 1.17
VPS36-204ENST00000480923 TSPAN1O60635 241 aa22.33■■□□□ 1.17
VPS36-204ENST00000480923 BMP15O95972 392 aa22.33■■□□□ 1.17
VPS36-204ENST00000480923 ITGB1P05556 798 aa22.33■■□□□ 1.17
VPS36-204ENST00000480923 HOXA11P31270 313 aaPredicted RBP22.33■■□□□ 1.17
VPS36-204ENST00000480923 MBTD1Q05BQ5 628 aa22.33■■□□□ 1.17
VPS36-204ENST00000480923 ATXN2LQ8WWM7 1075 aaKnown RBP22.33■■□□□ 1.17
VPS36-204ENST00000480923 LPPQ93052 612 aa22.33■■□□□ 1.17
VPS36-204ENST00000480923 NFKBIZQ9BYH8 718 aa22.33■■□□□ 1.17
VPS36-204ENST00000480923 CWH43Q9H720 699 aa22.33■■□□□ 1.17
VPS36-204ENST00000480923 PCDHB2Q9Y5E7 798 aa22.33■■□□□ 1.17
VPS36-204ENST00000480923 NLRC5Q86WI3 1866 aa22.32■■□□□ 1.16
VPS36-204ENST00000480923 ZNF623O75123 536 aa22.32■■□□□ 1.16
VPS36-204ENST00000480923 EYA4O95677 639 aa22.32■■□□□ 1.16
VPS36-204ENST00000480923 LAG3P18627 525 aa22.32■■□□□ 1.16
VPS36-204ENST00000480923 AXLP30530 894 aa22.32■■□□□ 1.16
VPS36-204ENST00000480923 ZBTB8OSQ8IWT0 167 aa22.32■■□□□ 1.16
VPS36-204ENST00000480923 COLGALT1Q8NBJ5 622 aa22.32■■□□□ 1.16
VPS36-204ENST00000480923 PGBD4Q96DM1 585 aa22.32■■□□□ 1.16
VPS36-204ENST00000480923 NSUN3Q9H649 340 aaKnown RBP22.32■■□□□ 1.16
VPS36-204ENST00000480923 COG5Q9UP83 839 aa22.32■■□□□ 1.16
VPS36-204ENST00000480923 TRANK1O15050 2925 aa22.32■■□□□ 1.16
VPS36-204ENST00000480923 PRUNE2Q8WUY3 3088 aa22.31■■□□□ 1.16
VPS36-204ENST00000480923 MRPS5P82675 430 aaKnown RBP22.31■■□□□ 1.16
VPS36-204ENST00000480923 RESTQ13127 1097 aa22.31■■□□□ 1.16
VPS36-204ENST00000480923 SF3A1Q15459 793 aaKnown RBP22.31■■□□□ 1.16
VPS36-204ENST00000480923 UBXN11Q5T124 520 aa22.31■■□□□ 1.16
VPS36-204ENST00000480923 NOTUMQ6P988 496 aa22.31■■□□□ 1.16
VPS36-204ENST00000480923 LRRC55Q6ZSA7 311 aa22.31■■□□□ 1.16
VPS36-204ENST00000480923 THNSL1Q8IYQ7 743 aa22.31■■□□□ 1.16
VPS36-204ENST00000480923 SPPL3Q8TCT6 385 aa22.31■■□□□ 1.16
VPS36-204ENST00000480923 BSNDQ8WZ55 320 aa22.31■■□□□ 1.16
VPS36-204ENST00000480923 HLA-CQ95604 372 aa22.31■■□□□ 1.16
VPS36-204ENST00000480923 CPB2Q96IY4 423 aa22.31■■□□□ 1.16
VPS36-204ENST00000480923 CDK5RAP3Q96JB5 506 aa22.31■■□□□ 1.16
VPS36-204ENST00000480923 PLIN2Q99541 437 aa22.31■■□□□ 1.16
VPS36-204ENST00000480923 MRPL9Q9BYD2 267 aaKnown RBP22.31■■□□□ 1.16
VPS36-204ENST00000480923 TFF2Q03403 129 aa22.3■■□□□ 1.16
VPS36-204ENST00000480923 CSPP1Q1MSJ5 1256 aa22.3■■□□□ 1.16
VPS36-204ENST00000480923 TCEAL5Q5H9L2 206 aa22.3■■□□□ 1.16
VPS36-204ENST00000480923 TJAP1Q5JTD0 557 aa22.3■■□□□ 1.16
VPS36-204ENST00000480923 GLB1LQ6UWU2 654 aa22.3■■□□□ 1.16
VPS36-204ENST00000480923 POF1BQ8WVV4 589 aa22.3■■□□□ 1.16
VPS36-204ENST00000480923 IFT74Q96LB3 600 aa22.3■■□□□ 1.16
VPS36-204ENST00000480923 ASB2Q96Q27 587 aa22.3■■□□□ 1.16
VPS36-204ENST00000480923 NT5C3AQ9H0P0 336 aa22.3■■□□□ 1.16
VPS36-204ENST00000480923 C2orf40Q9H1Z8 148 aa22.3■■□□□ 1.16
VPS36-204ENST00000480923 POLD4Q9HCU8 107 aa22.3■■□□□ 1.16
VPS36-204ENST00000480923 INPP5FQ9Y2H2 1132 aa22.3■■□□□ 1.16
VPS36-204ENST00000480923 MEIS3P2A8K0S8 358 aa22.29■■□□□ 1.16
VPS36-204ENST00000480923 DLL1O00548 723 aa22.29■■□□□ 1.16
VPS36-204ENST00000480923 STX6O43752 255 aa22.29■■□□□ 1.16
VPS36-204ENST00000480923 FGF18O76093 207 aa22.29■■□□□ 1.16
VPS36-204ENST00000480923 HSP90AA1P07900 732 aaKnown RBP22.29■■□□□ 1.16
VPS36-204ENST00000480923 ARF4P18085 180 aaPredicted RBP22.29■■□□□ 1.16
VPS36-204ENST00000480923 PPP2R5AQ15172 486 aa22.29■■□□□ 1.16
VPS36-204ENST00000480923 AMHR2Q16671 573 aa22.29■■□□□ 1.16
VPS36-204ENST00000480923 KCNK18Q7Z418 384 aa22.29■■□□□ 1.16
VPS36-204ENST00000480923 CABP7Q86V35 215 aa22.29■■□□□ 1.16
VPS36-204ENST00000480923 DEPTORQ8TB45 409 aa22.29■■□□□ 1.16
VPS36-204ENST00000480923 KIFAP3Q92845 792 aa22.29■■□□□ 1.16
VPS36-204ENST00000480923 CCDC51Q96ER9 411 aa22.29■■□□□ 1.16
VPS36-204ENST00000480923 AK8Q96MA6 479 aa22.29■■□□□ 1.16
VPS36-204ENST00000480923 ZNF558Q96NG5 402 aa22.29■■□□□ 1.16
VPS36-204ENST00000480923 PNMA5Q96PV4 448 aa22.29■■□□□ 1.16
VPS36-204ENST00000480923 CSRNP2Q9H175 543 aa22.29■■□□□ 1.16
VPS36-204ENST00000480923 MTMR6Q9Y217 621 aa22.29■■□□□ 1.16
VPS36-204ENST00000480923 FNDC1Q4ZHG4 1894 aaPredicted RBP22.28■■□□□ 1.16
VPS36-204ENST00000480923 B4GALT5O43286 388 aa22.28■■□□□ 1.16
VPS36-204ENST00000480923 SSBP05455 408 aaKnown RBP eCLIP22.28■■□□□ 1.16
VPS36-204ENST00000480923 DNAJB1P25685 340 aa22.28■■□□□ 1.16
VPS36-204ENST00000480923 PBX3P40426 434 aa22.28■■□□□ 1.16
VPS36-204ENST00000480923 NAMPTP43490 491 aa22.28■■□□□ 1.16
VPS36-204ENST00000480923 AAK1Q2M2I8 961 aa22.28■■□□□ 1.16
VPS36-204ENST00000480923 HYIQ5T013 277 aa22.28■■□□□ 1.16
VPS36-204ENST00000480923 CDCA2Q69YH5 1023 aaPredicted RBP22.28■■□□□ 1.16
VPS36-204ENST00000480923 FAM173BQ6P4H8 233 aa22.28■■□□□ 1.16
VPS36-204ENST00000480923 KCNT2Q6UVM3 1135 aa22.28■■□□□ 1.16
VPS36-204ENST00000480923 MRPL10Q7Z7H8 261 aaKnown RBP22.28■■□□□ 1.16
VPS36-204ENST00000480923 CNNM3Q8NE01 707 aa22.28■■□□□ 1.16
VPS36-204ENST00000480923 RSPH1Q8WYR4 309 aa22.28■■□□□ 1.16
VPS36-204ENST00000480923 EIF2AQ9BY44 585 aaKnown RBP22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 96.6 ms