RNA–Protein interactions for RNA: ENST00000480219.1

SCAMP3-207, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 2

Gene SCAMP3, Length 752 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-207ENST00000480219 C1orf53Q5VUE5 145 aa18.54■□□□□ 0.56
SCAMP3-207ENST00000480219 PPP4R3CPQ6ZMV5 832 aa18.54■□□□□ 0.56
SCAMP3-207ENST00000480219 TAS1R3Q7RTX0 852 aa18.54■□□□□ 0.56
SCAMP3-207ENST00000480219 DHX40Q8IX18 779 aaKnown RBP18.54■□□□□ 0.56
SCAMP3-207ENST00000480219 NELFBQ8WX92 580 aa18.54■□□□□ 0.56
SCAMP3-207ENST00000480219 RBSNQ9H1K0 784 aa18.54■□□□□ 0.56
SCAMP3-207ENST00000480219 ADAMTS10Q9H324 1103 aa18.54■□□□□ 0.56
SCAMP3-207ENST00000480219 TMEM206Q9H813 350 aa18.54■□□□□ 0.56
SCAMP3-207ENST00000480219 MAPK8IP1Q9UQF2 711 aa18.54■□□□□ 0.56
SCAMP3-207ENST00000480219 BICDL2A1A5D9 508 aa18.53■□□□□ 0.56
SCAMP3-207ENST00000480219 DENND3A2RUS2 1198 aa18.53■□□□□ 0.56
SCAMP3-207ENST00000480219 CCDC169A6NNP5 214 aa18.53■□□□□ 0.56
SCAMP3-207ENST00000480219 GPR32O75388 356 aa18.53■□□□□ 0.56
SCAMP3-207ENST00000480219 PRPF6O94906 941 aaKnown RBP18.53■□□□□ 0.56
SCAMP3-207ENST00000480219 PTK7Q13308 1070 aa18.53■□□□□ 0.56
SCAMP3-207ENST00000480219 SNX17Q15036 470 aa18.53■□□□□ 0.56
SCAMP3-207ENST00000480219 FAM187BQ17R55 369 aa18.53■□□□□ 0.56
SCAMP3-207ENST00000480219 EDRF1Q3B7T1 1238 aa18.53■□□□□ 0.56
SCAMP3-207ENST00000480219 ZC2HC1CQ53FD0 456 aaPredicted RBP18.53■□□□□ 0.56
SCAMP3-207ENST00000480219 RHPN2Q8IUC4 686 aa18.53■□□□□ 0.56
SCAMP3-207ENST00000480219 KSR1Q8IVT5 923 aa18.53■□□□□ 0.56
SCAMP3-207ENST00000480219 PPP1R13LQ8WUF5 828 aa18.53■□□□□ 0.56
SCAMP3-207ENST00000480219 ACCSQ96QU6 501 aa18.53■□□□□ 0.56
SCAMP3-207ENST00000480219 IFT122Q9HBG6 1241 aa18.53■□□□□ 0.56
SCAMP3-207ENST00000480219 TYW1Q9NV66 732 aaKnown RBP18.53■□□□□ 0.56
SCAMP3-207ENST00000480219 CGNQ9P2M7 1197 aaKnown RBP18.53■□□□□ 0.56
SCAMP3-207ENST00000480219 TBX20Q9UMR3 447 aa18.53■□□□□ 0.56
SCAMP3-207ENST00000480219 TRIP12Q14669 1992 aaPredicted RBP18.52■□□□□ 0.56
SCAMP3-207ENST00000480219 LRRIQ4A6NIV6 560 aa18.52■□□□□ 0.56
SCAMP3-207ENST00000480219 SMTNL1A8MU46 457 aa18.52■□□□□ 0.56
SCAMP3-207ENST00000480219 TGFB1I1O43294 461 aa18.52■□□□□ 0.56
SCAMP3-207ENST00000480219 CAND2O75155 1236 aa18.52■□□□□ 0.56
SCAMP3-207ENST00000480219 MYCNP04198 464 aaPredicted RBP18.52■□□□□ 0.56
SCAMP3-207ENST00000480219 PMS1P54277 932 aaKnown RBP18.52■□□□□ 0.56
SCAMP3-207ENST00000480219 RBL2Q08999 1139 aa18.52■□□□□ 0.56
SCAMP3-207ENST00000480219 KCNA1Q09470 495 aa18.52■□□□□ 0.56
SCAMP3-207ENST00000480219 TRIM71Q2Q1W2 868 aaKnown RBP18.52■□□□□ 0.56
SCAMP3-207ENST00000480219 SPATA1Q5VX52 437 aa18.52■□□□□ 0.56
SCAMP3-207ENST00000480219 C12orf56Q8IXR9 622 aa18.52■□□□□ 0.56
SCAMP3-207ENST00000480219 RNF149Q8NC42 400 aa18.52■□□□□ 0.56
SCAMP3-207ENST00000480219 DEPTORQ8TB45 409 aa18.52■□□□□ 0.56
SCAMP3-207ENST00000480219 DUSP9Q99956 384 aaKnown RBP18.52■□□□□ 0.56
SCAMP3-207ENST00000480219 KIFC3Q9BVG8 833 aa18.52■□□□□ 0.56
SCAMP3-207ENST00000480219 FZD8Q9H461 694 aa18.52■□□□□ 0.56
SCAMP3-207ENST00000480219 CTNND2Q9UQB3 1225 aa18.52■□□□□ 0.56
SCAMP3-207ENST00000480219 AKT3Q9Y243 479 aa18.52■□□□□ 0.56
SCAMP3-207ENST00000480219 MYCP01106 439 aaPredicted RBP18.51■□□□□ 0.55
SCAMP3-207ENST00000480219 TFRCP02786 760 aaKnown RBP18.51■□□□□ 0.55
SCAMP3-207ENST00000480219 VTNP04004 478 aa18.51■□□□□ 0.55
SCAMP3-207ENST00000480219 PHKA2P46019 1235 aa18.51■□□□□ 0.55
SCAMP3-207ENST00000480219 CHMP4BP1P59074 171 aa18.51■□□□□ 0.55
SCAMP3-207ENST00000480219 MYBPC2Q14324 1141 aa18.51■□□□□ 0.55
SCAMP3-207ENST00000480219 GSE1Q14687 1217 aa18.51■□□□□ 0.55
SCAMP3-207ENST00000480219 PCBP1Q15365 356 aaKnown RBP eCLIP18.51■□□□□ 0.55
SCAMP3-207ENST00000480219 PTGISQ16647 500 aa18.51■□□□□ 0.55
SCAMP3-207ENST00000480219 FAM47CQ5HY64 1035 aa18.51■□□□□ 0.55
SCAMP3-207ENST00000480219 ANKRD40Q6AI12 368 aa18.51■□□□□ 0.55
SCAMP3-207ENST00000480219 KLHL10Q6JEL2 608 aa18.51■□□□□ 0.55
SCAMP3-207ENST00000480219 SRGAP1Q7Z6B7 1085 aa18.51■□□□□ 0.55
SCAMP3-207ENST00000480219 SLC9A9Q8IVB4 645 aa18.51■□□□□ 0.55
SCAMP3-207ENST00000480219 ZBTB8OSQ8IWT0 167 aa18.51■□□□□ 0.55
SCAMP3-207ENST00000480219 AOPEPQ8N6M6 819 aa18.51■□□□□ 0.55
SCAMP3-207ENST00000480219 GOLGA5Q8TBA6 731 aa18.51■□□□□ 0.55
SCAMP3-207ENST00000480219 DNAJB3Q8WWF6 145 aa18.51■□□□□ 0.55
SCAMP3-207ENST00000480219 GBP3Q9H0R5 595 aa18.51■□□□□ 0.55
SCAMP3-207ENST00000480219 HSD3B7Q9H2F3 369 aa18.51■□□□□ 0.55
SCAMP3-207ENST00000480219 EXOC7Q9UPT5 735 aa18.51■□□□□ 0.55
SCAMP3-207ENST00000480219 A0A087WZ62 844 aa18.5■□□□□ 0.55
SCAMP3-207ENST00000480219 K7ERI5 159 aa18.5■□□□□ 0.55
SCAMP3-207ENST00000480219 CD4P01730 458 aa18.5■□□□□ 0.55
SCAMP3-207ENST00000480219 SRGAP2CP0DJJ0 459 aa18.5■□□□□ 0.55
SCAMP3-207ENST00000480219 NLRP11P59045 1033 aaKnown RBP18.5■□□□□ 0.55
SCAMP3-207ENST00000480219 MBTD1Q05BQ5 628 aa18.5■□□□□ 0.55
SCAMP3-207ENST00000480219 MGAT3Q09327 533 aa18.5■□□□□ 0.55
SCAMP3-207ENST00000480219 UVSSAQ2YD98 709 aa18.5■□□□□ 0.55
SCAMP3-207ENST00000480219 ANKRD33Q7Z3H0 272 aa18.5■□□□□ 0.55
SCAMP3-207ENST00000480219 LUZP1Q86V48 1076 aa18.5■□□□□ 0.55
SCAMP3-207ENST00000480219 DHX38Q92620 1227 aaKnown RBP18.5■□□□□ 0.55
SCAMP3-207ENST00000480219 VTI1AQ96AJ9 217 aa18.5■□□□□ 0.55
SCAMP3-207ENST00000480219 PRIMPOLQ96LW4 560 aa18.5■□□□□ 0.55
SCAMP3-207ENST00000480219 NLRP4Q96MN2 994 aa18.5■□□□□ 0.55
SCAMP3-207ENST00000480219 FDXACB1Q9BRP7 624 aaPredicted RBP18.5■□□□□ 0.55
SCAMP3-207ENST00000480219 DMAC2Q9NW81 257 aa18.5■□□□□ 0.55
SCAMP3-207ENST00000480219 STYXL1Q9Y6J8 313 aa18.5■□□□□ 0.55
SCAMP3-207ENST00000480219 TRIM49BA6NDI0 452 aa18.49■□□□□ 0.55
SCAMP3-207ENST00000480219 B4GALT4O60513 344 aa18.49■□□□□ 0.55
SCAMP3-207ENST00000480219 ZNF18P17022 549 aa18.49■□□□□ 0.55
SCAMP3-207ENST00000480219 CRYBB1P53674 252 aaPredicted RBP18.49■□□□□ 0.55
SCAMP3-207ENST00000480219 AMHR2Q16671 573 aa18.49■□□□□ 0.55
SCAMP3-207ENST00000480219 FAM26DQ5JW98 314 aa18.49■□□□□ 0.55
SCAMP3-207ENST00000480219 CDKAL1Q5VV42 579 aa18.49■□□□□ 0.55
SCAMP3-207ENST00000480219 ZPBP2Q6X784 338 aa18.49■□□□□ 0.55
SCAMP3-207ENST00000480219 LRRC55Q6ZSA7 311 aa18.49■□□□□ 0.55
SCAMP3-207ENST00000480219 RSPH3Q86UC2 560 aa18.49■□□□□ 0.55
SCAMP3-207ENST00000480219 NELFCDQ8IXH7 590 aa18.49■□□□□ 0.55
SCAMP3-207ENST00000480219 FAM126BQ8IXS8 530 aa18.49■□□□□ 0.55
SCAMP3-207ENST00000480219 NOC3LQ8WTT2 800 aaKnown RBP18.49■□□□□ 0.55
SCAMP3-207ENST00000480219 WNT8BQ93098 351 aa18.49■□□□□ 0.55
SCAMP3-207ENST00000480219 TSG101Q99816 390 aa18.49■□□□□ 0.55
SCAMP3-207ENST00000480219 FAM49AQ9H0Q0 323 aaPredicted RBP18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms