RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 SLC4A7Q9Y6M7 1214 aa21.81■■□□□ 1.08
LIME1-205ENST00000480139 ZBBXA8MT70 800 aa21.8■■□□□ 1.08
LIME1-205ENST00000480139 CSDE1O75534 798 aaKnown RBP21.8■■□□□ 1.08
LIME1-205ENST00000480139 SLFN14P0C7P3 912 aa21.8■■□□□ 1.08
LIME1-205ENST00000480139 SCP2P22307 547 aa21.8■■□□□ 1.08
LIME1-205ENST00000480139 SYKP43405 635 aa21.8■■□□□ 1.08
LIME1-205ENST00000480139 NDUFA8P51970 172 aa21.8■■□□□ 1.08
LIME1-205ENST00000480139 EFNA5P52803 228 aa21.8■■□□□ 1.08
LIME1-205ENST00000480139 PEX3P56589 373 aa21.8■■□□□ 1.08
LIME1-205ENST00000480139 DSC3Q14574 896 aa21.8■■□□□ 1.08
LIME1-205ENST00000480139 LRIT3Q3SXY7 679 aa21.8■■□□□ 1.08
LIME1-205ENST00000480139 CATSPER4Q7RTX7 472 aa21.8■■□□□ 1.08
LIME1-205ENST00000480139 CEP57L1Q8IYX8 460 aa21.8■■□□□ 1.08
LIME1-205ENST00000480139 DEPTORQ8TB45 409 aa21.8■■□□□ 1.08
LIME1-205ENST00000480139 DNAJC19Q96DA6 116 aa21.8■■□□□ 1.08
LIME1-205ENST00000480139 PRIMPOLQ96LW4 560 aa21.8■■□□□ 1.08
LIME1-205ENST00000480139 PARVGQ9HBI0 331 aa21.8■■□□□ 1.08
LIME1-205ENST00000480139 POLD4Q9HCU8 107 aa21.8■■□□□ 1.08
LIME1-205ENST00000480139 AGPAT5Q9NUQ2 364 aa21.8■■□□□ 1.08
LIME1-205ENST00000480139 LOC101059915A0A1B0GWI6 518 aaPredicted RBP21.79■■□□□ 1.08
LIME1-205ENST00000480139 ENPP3O14638 875 aa21.79■■□□□ 1.08
LIME1-205ENST00000480139 ACTN4O43707 911 aaKnown RBP21.79■■□□□ 1.08
LIME1-205ENST00000480139 TBCAO75347 108 aaKnown RBP21.79■■□□□ 1.08
LIME1-205ENST00000480139 FAM13AO94988 1023 aa21.79■■□□□ 1.08
LIME1-205ENST00000480139 AMHP03971 560 aa21.79■■□□□ 1.08
LIME1-205ENST00000480139 FGFR4P22455 802 aa21.79■■□□□ 1.08
LIME1-205ENST00000480139 SMTNP53814 917 aa21.79■■□□□ 1.08
LIME1-205ENST00000480139 FAM187BQ17R55 369 aa21.79■■□□□ 1.08
LIME1-205ENST00000480139 PPP4R3CPQ6ZMV5 832 aa21.79■■□□□ 1.08
LIME1-205ENST00000480139 LINC01599Q8WXQ3 324 aa21.79■■□□□ 1.08
LIME1-205ENST00000480139 CCDC113Q9H0I3 377 aa21.79■■□□□ 1.08
LIME1-205ENST00000480139 FZD8Q9H461 694 aa21.79■■□□□ 1.08
LIME1-205ENST00000480139 GOLPH3LQ9H4A5 285 aa21.79■■□□□ 1.08
LIME1-205ENST00000480139 RGS18Q9NS28 235 aa21.79■■□□□ 1.08
LIME1-205ENST00000480139 C1orf112Q9NSG2 853 aa21.79■■□□□ 1.08
LIME1-205ENST00000480139 ARHGAP28Q9P2N2 729 aa21.79■■□□□ 1.08
LIME1-205ENST00000480139 ADGRA3Q8IWK6 1321 aa21.79■■□□□ 1.08
LIME1-205ENST00000480139 FRMD3A2A2Y4 597 aa21.78■■□□□ 1.08
LIME1-205ENST00000480139 SFI1A8K8P3 1242 aa21.78■■□□□ 1.08
LIME1-205ENST00000480139 H0YCG3 227 aa21.78■■□□□ 1.08
LIME1-205ENST00000480139 INO80B-WBP1J3KQ70 363 aa21.78■■□□□ 1.08
LIME1-205ENST00000480139 ERLIN2O94905 339 aa21.78■■□□□ 1.08
LIME1-205ENST00000480139 ZSCAN20P17040 1043 aaPredicted RBP21.78■■□□□ 1.08
LIME1-205ENST00000480139 AXLP30530 894 aa21.78■■□□□ 1.08
LIME1-205ENST00000480139 CACNB1Q02641 598 aaPredicted RBP21.78■■□□□ 1.08
LIME1-205ENST00000480139 AMHR2Q16671 573 aa21.78■■□□□ 1.08
LIME1-205ENST00000480139 DYMQ7RTS9 669 aa21.78■■□□□ 1.08
LIME1-205ENST00000480139 RTN4RL1Q86UN2 441 aaPredicted RBP21.78■■□□□ 1.08
LIME1-205ENST00000480139 TRAIPQ9BWF2 469 aa21.78■■□□□ 1.08
LIME1-205ENST00000480139 TRIM9Q9C026 710 aa21.78■■□□□ 1.08
LIME1-205ENST00000480139 KMT5AQ9NQR1 393 aa21.78■■□□□ 1.08
LIME1-205ENST00000480139 PRMT7Q9NVM4 692 aaPredicted RBP21.78■■□□□ 1.08
LIME1-205ENST00000480139 DACT1Q9NYF0 836 aa21.78■■□□□ 1.08
LIME1-205ENST00000480139 SEL1LQ9UBV2 794 aa21.78■■□□□ 1.08
LIME1-205ENST00000480139 TTC3P53804 2025 aa21.78■■□□□ 1.08
LIME1-205ENST00000480139 DENND3A2RUS2 1198 aa21.77■■□□□ 1.08
LIME1-205ENST00000480139 CCDC169A6NNP5 214 aa21.77■■□□□ 1.08
LIME1-205ENST00000480139 MGEA5O60502 916 aa21.77■■□□□ 1.08
LIME1-205ENST00000480139 TSPAN1O60635 241 aa21.77■■□□□ 1.08
LIME1-205ENST00000480139 ATP2A2P16615 1042 aaKnown RBP21.77■■□□□ 1.08
LIME1-205ENST00000480139 GAP43P17677 238 aa21.77■■□□□ 1.08
LIME1-205ENST00000480139 NCKAP1LP55160 1127 aa21.77■■□□□ 1.08
LIME1-205ENST00000480139 DEFB103AP81534 67 aa21.77■■□□□ 1.08
LIME1-205ENST00000480139 NCBP1Q09161 790 aaKnown RBP21.77■■□□□ 1.08
LIME1-205ENST00000480139 MAPK6Q16659 721 aa21.77■■□□□ 1.08
LIME1-205ENST00000480139 LONRF3Q496Y0 759 aa21.77■■□□□ 1.08
LIME1-205ENST00000480139 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.77■■□□□ 1.08
LIME1-205ENST00000480139 SLC24A5Q71RS6 500 aa21.77■■□□□ 1.08
LIME1-205ENST00000480139 SLC17A8Q8NDX2 589 aa21.77■■□□□ 1.08
LIME1-205ENST00000480139 ADAM2Q99965 735 aa21.77■■□□□ 1.08
LIME1-205ENST00000480139 C7orf25Q9BPX7 421 aa21.77■■□□□ 1.08
LIME1-205ENST00000480139 TMEM134Q9H6X4 195 aa21.77■■□□□ 1.08
LIME1-205ENST00000480139 RNF216Q9NWF9 866 aaPredicted RBP21.77■■□□□ 1.08
LIME1-205ENST00000480139 SERTAD1Q9UHV2 236 aa21.77■■□□□ 1.08
LIME1-205ENST00000480139 TRIOBPQ9H2D6 2365 aa21.77■■□□□ 1.08
LIME1-205ENST00000480139 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.76■■□□□ 1.07
LIME1-205ENST00000480139 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.76■■□□□ 1.07
LIME1-205ENST00000480139 RBAK-RBAKDNI3L0D1 243 aa21.76■■□□□ 1.07
LIME1-205ENST00000480139 MYL1P05976 194 aa21.76■■□□□ 1.07
LIME1-205ENST00000480139 MAPTP10636 758 aaKnown RBP21.76■■□□□ 1.07
LIME1-205ENST00000480139 HOXA11P31270 313 aaPredicted RBP21.76■■□□□ 1.07
LIME1-205ENST00000480139 ABCD1P33897 745 aa21.76■■□□□ 1.07
LIME1-205ENST00000480139 FMR1NBQ8N0W7 255 aaPredicted RBP21.76■■□□□ 1.07
LIME1-205ENST00000480139 MYCT1Q8N699 235 aa21.76■■□□□ 1.07
LIME1-205ENST00000480139 TOP1MTQ969P6 601 aa21.76■■□□□ 1.07
LIME1-205ENST00000480139 CCDC51Q96ER9 411 aa21.76■■□□□ 1.07
LIME1-205ENST00000480139 KIFC3Q9BVG8 833 aa21.76■■□□□ 1.07
LIME1-205ENST00000480139 PIN4Q9Y237 131 aaKnown RBP21.76■■□□□ 1.07
LIME1-205ENST00000480139 CNTNAP2Q9UHC6 1331 aa21.76■■□□□ 1.07
LIME1-205ENST00000480139 GBF1Q92538 1859 aa21.75■■□□□ 1.07
LIME1-205ENST00000480139 C9IYK1 514 aa21.75■■□□□ 1.07
LIME1-205ENST00000480139 K7ERI5 159 aa21.75■■□□□ 1.07
LIME1-205ENST00000480139 ACKR2O00590 384 aa21.75■■□□□ 1.07
LIME1-205ENST00000480139 TRAK2O60296 914 aa21.75■■□□□ 1.07
LIME1-205ENST00000480139 ZNF202O95125 648 aa21.75■■□□□ 1.07
LIME1-205ENST00000480139 SARSP49591 514 aaKnown RBP21.75■■□□□ 1.07
LIME1-205ENST00000480139 FAM189BP81408 668 aa21.75■■□□□ 1.07
LIME1-205ENST00000480139 SMAD3P84022 425 aaKnown RBP21.75■■□□□ 1.07
LIME1-205ENST00000480139 FAM160A1Q05DH4 1040 aa21.75■■□□□ 1.07
LIME1-205ENST00000480139 HERC6Q8IVU3 1022 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms