RNA–Protein interactions for RNA: ENST00000479897.5

TRAPPC12-218, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 454 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-218ENST00000479897 SRGAP1Q7Z6B7 1085 aa13.82□□□□□ -0.2
TRAPPC12-218ENST00000479897 MAP4K3Q8IVH8 894 aa13.82□□□□□ -0.2
TRAPPC12-218ENST00000479897 KSR1Q8IVT5 923 aa13.82□□□□□ -0.2
TRAPPC12-218ENST00000479897 ZBTB8OSQ8IWT0 167 aa13.82□□□□□ -0.2
TRAPPC12-218ENST00000479897 GUF1Q8N442 669 aaKnown RBP13.82□□□□□ -0.2
TRAPPC12-218ENST00000479897 DEPTORQ8TB45 409 aa13.82□□□□□ -0.2
TRAPPC12-218ENST00000479897 PRIMPOLQ96LW4 560 aa13.82□□□□□ -0.2
TRAPPC12-218ENST00000479897 NLRP4Q96MN2 994 aa13.82□□□□□ -0.2
TRAPPC12-218ENST00000479897 CELF4Q9BZC1 486 aaKnown RBP13.82□□□□□ -0.2
TRAPPC12-218ENST00000479897 SLC39A2Q9NP94 309 aa13.82□□□□□ -0.2
TRAPPC12-218ENST00000479897 TBX21Q9UL17 535 aa13.82□□□□□ -0.2
TRAPPC12-218ENST00000479897 GDAQ9Y2T3 454 aa13.82□□□□□ -0.2
TRAPPC12-218ENST00000479897 PCDHB13Q9Y5F0 798 aa13.82□□□□□ -0.2
TRAPPC12-218ENST00000479897 LTBP2Q14767 1821 aa13.81□□□□□ -0.2
TRAPPC12-218ENST00000479897 A0A087WZ62 844 aa13.81□□□□□ -0.2
TRAPPC12-218ENST00000479897 SYCE3A1L190 88 aa13.81□□□□□ -0.2
TRAPPC12-218ENST00000479897 CCDC169A6NNP5 214 aa13.81□□□□□ -0.2
TRAPPC12-218ENST00000479897 BIN1O00499 593 aa13.81□□□□□ -0.2
TRAPPC12-218ENST00000479897 GCNT3O95395 438 aa13.81□□□□□ -0.2
TRAPPC12-218ENST00000479897 CLTBP09497 229 aa13.81□□□□□ -0.2
TRAPPC12-218ENST00000479897 CKBP12277 381 aa13.81□□□□□ -0.2
TRAPPC12-218ENST00000479897 DARSP14868 501 aaKnown RBP13.81□□□□□ -0.2
TRAPPC12-218ENST00000479897 MBTD1Q05BQ5 628 aa13.81□□□□□ -0.2
TRAPPC12-218ENST00000479897 KIZQ2M2Z5 673 aa13.81□□□□□ -0.2
TRAPPC12-218ENST00000479897 CT47A1Q5JQC4 288 aaPredicted RBP13.81□□□□□ -0.2
TRAPPC12-218ENST00000479897 L1TD1Q5T7N2 865 aaKnown RBP13.81□□□□□ -0.2
TRAPPC12-218ENST00000479897 FOXR2Q6PJQ5 311 aa13.81□□□□□ -0.2
TRAPPC12-218ENST00000479897 SASS6Q6UVJ0 657 aa13.81□□□□□ -0.2
TRAPPC12-218ENST00000479897 FAM43BQ6ZT52 329 aaPredicted RBP13.81□□□□□ -0.2
TRAPPC12-218ENST00000479897 TAS1R3Q7RTX0 852 aa13.81□□□□□ -0.2
TRAPPC12-218ENST00000479897 TNS4Q8IZW8 715 aa13.81□□□□□ -0.2
TRAPPC12-218ENST00000479897 MLKLQ8NB16 471 aa13.81□□□□□ -0.2
TRAPPC12-218ENST00000479897 ZNF507Q8TCN5 953 aa13.81□□□□□ -0.2
TRAPPC12-218ENST00000479897 SCFD1Q8WVM8 642 aa13.81□□□□□ -0.2
TRAPPC12-218ENST00000479897 NLRP7Q8WX94 980 aa13.81□□□□□ -0.2
TRAPPC12-218ENST00000479897 HPS3Q969F9 1004 aa13.81□□□□□ -0.2
TRAPPC12-218ENST00000479897 FDXACB1Q9BRP7 624 aaPredicted RBP13.81□□□□□ -0.2
TRAPPC12-218ENST00000479897 KIFC3Q9BVG8 833 aa13.81□□□□□ -0.2
TRAPPC12-218ENST00000479897 NOC4LQ9BVI4 516 aaKnown RBP13.81□□□□□ -0.2
TRAPPC12-218ENST00000479897 GCOM2Q9BZD3 368 aaPredicted RBP13.81□□□□□ -0.2
TRAPPC12-218ENST00000479897 INO80BQ9C086 356 aaPredicted RBP13.81□□□□□ -0.2
TRAPPC12-218ENST00000479897 ANO10Q9NW15 660 aa13.81□□□□□ -0.2
TRAPPC12-218ENST00000479897 TBC1D7Q9P0N9 293 aa13.81□□□□□ -0.2
TRAPPC12-218ENST00000479897 ATP11BQ9Y2G3 1177 aa13.81□□□□□ -0.2
TRAPPC12-218ENST00000479897 CDY2AQ9Y6F7 541 aa13.81□□□□□ -0.2
TRAPPC12-218ENST00000479897 ZMYM2Q9UBW7 1377 aa13.81□□□□□ -0.2
TRAPPC12-218ENST00000479897 DENND3A2RUS2 1198 aa13.8□□□□□ -0.2
TRAPPC12-218ENST00000479897 PARNO95453 639 aaKnown RBP13.8□□□□□ -0.2
TRAPPC12-218ENST00000479897 PIGRP01833 764 aa13.8□□□□□ -0.2
TRAPPC12-218ENST00000479897 CHRNA1P02708 482 aa13.8□□□□□ -0.2
TRAPPC12-218ENST00000479897 SRGAP2CP0DJJ0 459 aa13.8□□□□□ -0.2
TRAPPC12-218ENST00000479897 CCDC192P0DO97 292 aa13.8□□□□□ -0.2
TRAPPC12-218ENST00000479897 MYBP10242 640 aa13.8□□□□□ -0.2
TRAPPC12-218ENST00000479897 SELPP16109 830 aa13.8□□□□□ -0.2
TRAPPC12-218ENST00000479897 EIF4BP23588 611 aaKnown RBP13.8□□□□□ -0.2
TRAPPC12-218ENST00000479897 THPOP40225 353 aa13.8□□□□□ -0.2
TRAPPC12-218ENST00000479897 ZNF445P59923 1031 aa13.8□□□□□ -0.2
TRAPPC12-218ENST00000479897 TYRO3Q06418 890 aa13.8□□□□□ -0.2
TRAPPC12-218ENST00000479897 TMEM62Q0P6H9 643 aa13.8□□□□□ -0.2
TRAPPC12-218ENST00000479897 DPCR1Q3MIW9 517 aa13.8□□□□□ -0.2
TRAPPC12-218ENST00000479897 ZNF618Q5T7W0 954 aa13.8□□□□□ -0.2
TRAPPC12-218ENST00000479897 MYOCDQ8IZQ8 938 aa13.8□□□□□ -0.2
TRAPPC12-218ENST00000479897 ADSSL1Q8N142 457 aa13.8□□□□□ -0.2
TRAPPC12-218ENST00000479897 USP38Q8NB14 1042 aa13.8□□□□□ -0.2
TRAPPC12-218ENST00000479897 GLIS3Q8NEA6 775 aa13.8□□□□□ -0.2
TRAPPC12-218ENST00000479897 OSMRQ99650 979 aa13.8□□□□□ -0.2
TRAPPC12-218ENST00000479897 ANP32EQ9BTT0 268 aa13.8□□□□□ -0.2
TRAPPC12-218ENST00000479897 FZD8Q9H461 694 aa13.8□□□□□ -0.2
TRAPPC12-218ENST00000479897 MINDY3Q9H8M7 445 aa13.8□□□□□ -0.2
TRAPPC12-218ENST00000479897 PRMT7Q9NVM4 692 aaPredicted RBP13.8□□□□□ -0.2
TRAPPC12-218ENST00000479897 DACH1Q9UI36 760 aa13.8□□□□□ -0.2
TRAPPC12-218ENST00000479897 TBX20Q9UMR3 447 aa13.8□□□□□ -0.2
TRAPPC12-218ENST00000479897 PPP1R3GB7ZBB8 358 aa13.79□□□□□ -0.2
TRAPPC12-218ENST00000479897 KIAA0355O15063 1070 aa13.79□□□□□ -0.2
TRAPPC12-218ENST00000479897 PRKCBP05771 671 aa13.79□□□□□ -0.2
TRAPPC12-218ENST00000479897 SFPQP23246 707 aaKnown RBP eCLIP13.79□□□□□ -0.2
TRAPPC12-218ENST00000479897 PRCPP42785 496 aa13.79□□□□□ -0.2
TRAPPC12-218ENST00000479897 SNRPFP62306 86 aaKnown RBP13.79□□□□□ -0.2
TRAPPC12-218ENST00000479897 STIM1Q13586 685 aa13.79□□□□□ -0.2
TRAPPC12-218ENST00000479897 MAPK6Q16659 721 aa13.79□□□□□ -0.2
TRAPPC12-218ENST00000479897 AMHR2Q16671 573 aa13.79□□□□□ -0.2
TRAPPC12-218ENST00000479897 ZC2HC1CQ53FD0 456 aaPredicted RBP13.79□□□□□ -0.2
TRAPPC12-218ENST00000479897 FBXO47Q5MNV8 452 aa13.79□□□□□ -0.2
TRAPPC12-218ENST00000479897 LRRC8DQ7L1W4 858 aa13.79□□□□□ -0.2
TRAPPC12-218ENST00000479897 SMYD4Q8IYR2 804 aaPredicted RBP13.79□□□□□ -0.2
TRAPPC12-218ENST00000479897 TMEM40Q8WWA1 233 aa13.79□□□□□ -0.2
TRAPPC12-218ENST00000479897 SCLT1Q96NL6 688 aa13.79□□□□□ -0.2
TRAPPC12-218ENST00000479897 ACCSQ96QU6 501 aa13.79□□□□□ -0.2
TRAPPC12-218ENST00000479897 HIPK3Q9H422 1215 aa13.79□□□□□ -0.2
TRAPPC12-218ENST00000479897 TMEM206Q9H813 350 aa13.79□□□□□ -0.2
TRAPPC12-218ENST00000479897 EXOC7Q9UPT5 735 aa13.79□□□□□ -0.2
TRAPPC12-218ENST00000479897 CNTNAP2Q9UHC6 1331 aa13.79□□□□□ -0.2
TRAPPC12-218ENST00000479897 SCN5AQ14524 2016 aa13.78□□□□□ -0.2
TRAPPC12-218ENST00000479897 INO80B-WBP1J3KQ70 363 aa13.78□□□□□ -0.2
TRAPPC12-218ENST00000479897 K7ERI5 159 aa13.78□□□□□ -0.2
TRAPPC12-218ENST00000479897 ACKR2O00590 384 aa13.78□□□□□ -0.2
TRAPPC12-218ENST00000479897 PSMA7O14818 248 aa13.78□□□□□ -0.2
TRAPPC12-218ENST00000479897 PRPF6O94906 941 aaKnown RBP13.78□□□□□ -0.2
TRAPPC12-218ENST00000479897 CAVIN2O95810 425 aa13.78□□□□□ -0.2
TRAPPC12-218ENST00000479897 CTSHP09668 335 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms