RNA–Protein interactions for RNA: ENST00000479300.1

VCP-205, Transcript of valosin containing protein, humanhuman

TSL 1 (best)

Gene VCP, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-205ENST00000479300 DDX39AO00148 427 aaKnown RBP7.49□□□□□ -1.21
VCP-205ENST00000479300 GPR182O15218 404 aa7.49□□□□□ -1.21
VCP-205ENST00000479300 NARSO43776 548 aaKnown RBP7.49□□□□□ -1.21
VCP-205ENST00000479300 HBP1O60381 514 aa7.49□□□□□ -1.21
VCP-205ENST00000479300 EOMESO95936 686 aa7.49□□□□□ -1.21
VCP-205ENST00000479300 FAM86B2P0C5J1 330 aa7.49□□□□□ -1.21
VCP-205ENST00000479300 SRGAP2BP0DMP2 458 aa7.49□□□□□ -1.21
VCP-205ENST00000479300 PTMSP20962 102 aa7.49□□□□□ -1.21
VCP-205ENST00000479300 FGFR4P22455 802 aa7.49□□□□□ -1.21
VCP-205ENST00000479300 CDC27P30260 824 aa7.49□□□□□ -1.21
VCP-205ENST00000479300 SREBF1P36956 1147 aa7.49□□□□□ -1.21
VCP-205ENST00000479300 MTHFRP42898 656 aa7.49□□□□□ -1.21
VCP-205ENST00000479300 CLCN3P51790 818 aa7.49□□□□□ -1.21
VCP-205ENST00000479300 NLRP5P59047 1200 aa7.49□□□□□ -1.21
VCP-205ENST00000479300 SETQ01105 290 aaPredicted RBP7.49□□□□□ -1.21
VCP-205ENST00000479300 PDE4CQ08493 712 aa7.49□□□□□ -1.21
VCP-205ENST00000479300 FUT2Q10981 343 aa7.49□□□□□ -1.21
VCP-205ENST00000479300 SMC1AQ14683 1233 aaKnown RBP7.49□□□□□ -1.21
VCP-205ENST00000479300 ANGPT1Q15389 498 aa7.49□□□□□ -1.21
VCP-205ENST00000479300 CES5AQ6NT32 575 aa7.49□□□□□ -1.21
VCP-205ENST00000479300 RUFY3Q7L099 469 aa7.49□□□□□ -1.21
VCP-205ENST00000479300 LRRC43Q8N309 656 aa7.49□□□□□ -1.21
VCP-205ENST00000479300 TDRD5Q8NAT2 981 aaKnown RBP7.49□□□□□ -1.21
VCP-205ENST00000479300 DTWD2Q8NBA8 298 aa7.49□□□□□ -1.21
VCP-205ENST00000479300 FLCNQ8NFG4 579 aa7.49□□□□□ -1.21
VCP-205ENST00000479300 HELQQ8TDG4 1101 aa7.49□□□□□ -1.21
VCP-205ENST00000479300 KCNB2Q92953 911 aa7.49□□□□□ -1.21
VCP-205ENST00000479300 ZNF577Q9BSK1 485 aa7.49□□□□□ -1.21
VCP-205ENST00000479300 RNF26Q9BY78 433 aaPredicted RBP7.49□□□□□ -1.21
VCP-205ENST00000479300 C22orf23Q9BZE7 217 aa7.49□□□□□ -1.21
VCP-205ENST00000479300 ZBP1Q9H171 429 aa7.49□□□□□ -1.21
VCP-205ENST00000479300 TBC1D22BQ9NU19 505 aa7.49□□□□□ -1.21
VCP-205ENST00000479300 PUF60Q9UHX1 559 aaKnown RBP7.49□□□□□ -1.21
VCP-205ENST00000479300 USTQ9Y2C2 406 aa7.49□□□□□ -1.21
VCP-205ENST00000479300 SAMM50Q9Y512 469 aa7.49□□□□□ -1.21
VCP-205ENST00000479300 SPTBN2O15020 2390 aa7.48□□□□□ -1.21
VCP-205ENST00000479300 TPRP12270 2363 aaKnown RBP7.48□□□□□ -1.21
VCP-205ENST00000479300 COL4A3Q01955 1670 aa7.48□□□□□ -1.21
VCP-205ENST00000479300 ZFHX4Q86UP3 3567 aa7.48□□□□□ -1.21
VCP-205ENST00000479300 IGLV3-22A0A075B6J6 115 aa7.48□□□□□ -1.21
VCP-205ENST00000479300 KRBA1A5PL33 1030 aa7.48□□□□□ -1.21
VCP-205ENST00000479300 MEIS3P2A8K0S8 358 aa7.48□□□□□ -1.21
VCP-205ENST00000479300 ACACBO00763 2458 aa7.48□□□□□ -1.21
VCP-205ENST00000479300 ZNF862O60290 1169 aa7.48□□□□□ -1.21
VCP-205ENST00000479300 CSDE1O75534 798 aaKnown RBP7.48□□□□□ -1.21
VCP-205ENST00000479300 KRT37O76014 449 aa7.48□□□□□ -1.21
VCP-205ENST00000479300 CDKL5O76039 1030 aa7.48□□□□□ -1.21
VCP-205ENST00000479300 CXCL14O95715 111 aa7.48□□□□□ -1.21
VCP-205ENST00000479300 PSAPP07602 524 aa7.48□□□□□ -1.21
VCP-205ENST00000479300 XBP1P17861 261 aa7.48□□□□□ -1.21
VCP-205ENST00000479300 MCM4P33991 863 aa7.48□□□□□ -1.21
VCP-205ENST00000479300 PPM1AP35813 382 aa7.48□□□□□ -1.21
VCP-205ENST00000479300 CLK2P49760 499 aaKnown RBP7.48□□□□□ -1.21
VCP-205ENST00000479300 BCAR1P56945 870 aa7.48□□□□□ -1.21
VCP-205ENST00000479300 NLRP11P59045 1033 aaKnown RBP7.48□□□□□ -1.21
VCP-205ENST00000479300 CCT2P78371 535 aaKnown RBP7.48□□□□□ -1.21
VCP-205ENST00000479300 ZNF484Q5JVG2 852 aa7.48□□□□□ -1.21
VCP-205ENST00000479300 SWSAP1Q6NVH7 229 aa7.48□□□□□ -1.21
VCP-205ENST00000479300 PDXDC2PQ6P474 469 aa7.48□□□□□ -1.21
VCP-205ENST00000479300 POTEGQ6S5H5 508 aa7.48□□□□□ -1.21
VCP-205ENST00000479300 TMC5Q6UXY8 1006 aa7.48□□□□□ -1.21
VCP-205ENST00000479300 SIX5Q8N196 739 aa7.48□□□□□ -1.21
VCP-205ENST00000479300 VPS52Q8N1B4 723 aa7.48□□□□□ -1.21
VCP-205ENST00000479300 FBXL16Q8N461 479 aa7.48□□□□□ -1.21
VCP-205ENST00000479300 LRRC71Q8N4P6 559 aa7.48□□□□□ -1.21
VCP-205ENST00000479300 RNF169Q8NCN4 708 aa7.48□□□□□ -1.21
VCP-205ENST00000479300 CRYGNQ8WXF5 182 aa7.48□□□□□ -1.21
VCP-205ENST00000479300 RSAD2Q8WXG1 361 aa7.48□□□□□ -1.21
VCP-205ENST00000479300 PHKBQ93100 1093 aa7.48□□□□□ -1.21
VCP-205ENST00000479300 TRIM44Q96DX7 344 aaPredicted RBP7.48□□□□□ -1.21
VCP-205ENST00000479300 ZMYND12Q9H0C1 365 aa7.48□□□□□ -1.21
VCP-205ENST00000479300 MFSD1Q9H3U5 465 aa7.48□□□□□ -1.21
VCP-205ENST00000479300 ZNF302Q9NR11 478 aa7.48□□□□□ -1.21
VCP-205ENST00000479300 SH3GLB2Q9NR46 395 aa7.48□□□□□ -1.21
VCP-205ENST00000479300 CYP26B1Q9NR63 512 aa7.48□□□□□ -1.21
VCP-205ENST00000479300 PDRG1Q9NUG6 133 aa7.48□□□□□ -1.21
VCP-205ENST00000479300 DUSP12Q9UNI6 340 aa7.48□□□□□ -1.21
VCP-205ENST00000479300 R4GN57 208 aa7.48□□□□□ -1.21
VCP-205ENST00000479300 WDR81Q562E7 1941 aa7.48□□□□□ -1.21
VCP-205ENST00000479300 A0A0U1RQF3 1178 aa7.47□□□□□ -1.21
VCP-205ENST00000479300 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.47□□□□□ -1.21
VCP-205ENST00000479300 DDX11L8A8MPP1 907 aa7.47□□□□□ -1.21
VCP-205ENST00000479300 IPO5O00410 1097 aaKnown RBP7.47□□□□□ -1.21
VCP-205ENST00000479300 EDIL3O43854 480 aa7.47□□□□□ -1.21
VCP-205ENST00000479300 MARCH6O60337 910 aa7.47□□□□□ -1.21
VCP-205ENST00000479300 OFD1O75665 1012 aa7.47□□□□□ -1.21
VCP-205ENST00000479300 CYP3A4P08684 503 aa7.47□□□□□ -1.21
VCP-205ENST00000479300 IFNAR1P17181 557 aa7.47□□□□□ -1.21
VCP-205ENST00000479300 PDIA3P30101 505 aaKnown RBP7.47□□□□□ -1.21
VCP-205ENST00000479300 KRT17Q04695 432 aa7.47□□□□□ -1.21
VCP-205ENST00000479300 DRP2Q13474 957 aa7.47□□□□□ -1.21
VCP-205ENST00000479300 TDGQ13569 410 aa7.47□□□□□ -1.21
VCP-205ENST00000479300 PTPN14Q15678 1187 aa7.47□□□□□ -1.21
VCP-205ENST00000479300 PRR16Q569H4 304 aa7.47□□□□□ -1.21
VCP-205ENST00000479300 ZNF746Q6NUN9 644 aaPredicted RBP7.47□□□□□ -1.21
VCP-205ENST00000479300 FAM43BQ6ZT52 329 aaPredicted RBP7.47□□□□□ -1.21
VCP-205ENST00000479300 TRMT1LQ7Z2T5 733 aaKnown RBP7.47□□□□□ -1.21
VCP-205ENST00000479300 GPR149Q86SP6 731 aa7.47□□□□□ -1.21
VCP-205ENST00000479300 KIAA2013Q8IYS2 634 aa7.47□□□□□ -1.21
VCP-205ENST00000479300 METTL13Q8N6R0 699 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms