RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 FAM102BQ5T8I3 360 aa17.13■□□□□ 0.33
C9orf3-217ENST00000479161 Q7L0L9 218 aa17.13■□□□□ 0.33
C9orf3-217ENST00000479161 ZNF598Q86UK7 904 aaKnown RBP17.13■□□□□ 0.33
C9orf3-217ENST00000479161 IFT74Q96LB3 600 aa17.13■□□□□ 0.33
C9orf3-217ENST00000479161 GUCD1Q96NT3 240 aa17.13■□□□□ 0.33
C9orf3-217ENST00000479161 TGS1Q96RS0 853 aaKnown RBP17.13■□□□□ 0.33
C9orf3-217ENST00000479161 FZD8Q9H461 694 aa17.13■□□□□ 0.33
C9orf3-217ENST00000479161 MINDY3Q9H8M7 445 aa17.13■□□□□ 0.33
C9orf3-217ENST00000479161 RCOR1Q9UKL0 485 aa17.13■□□□□ 0.33
C9orf3-217ENST00000479161 STXBP5LQ9Y2K9 1186 aa17.13■□□□□ 0.33
C9orf3-217ENST00000479161 TCHHQ07283 1943 aa17.13■□□□□ 0.33
C9orf3-217ENST00000479161 NLRC5Q86WI3 1866 aa17.12■□□□□ 0.33
C9orf3-217ENST00000479161 UPP2O95045 317 aa17.12■□□□□ 0.33
C9orf3-217ENST00000479161 PLA2G4BP0C869 781 aa17.12■□□□□ 0.33
C9orf3-217ENST00000479161 DDIT3P35638 169 aa17.12■□□□□ 0.33
C9orf3-217ENST00000479161 MBTD1Q05BQ5 628 aa17.12■□□□□ 0.33
C9orf3-217ENST00000479161 GRIN2CQ14957 1233 aa17.12■□□□□ 0.33
C9orf3-217ENST00000479161 TMCO2Q7Z6W1 182 aaPredicted RBP17.12■□□□□ 0.33
C9orf3-217ENST00000479161 ECHDC2Q86YB7 292 aa17.12■□□□□ 0.33
C9orf3-217ENST00000479161 CNNM3Q8NE01 707 aa17.12■□□□□ 0.33
C9orf3-217ENST00000479161 ZNF668Q96K58 619 aaPredicted RBP17.12■□□□□ 0.33
C9orf3-217ENST00000479161 CDX2Q99626 313 aaPredicted RBP17.12■□□□□ 0.33
C9orf3-217ENST00000479161 GPRC5CQ9NQ84 441 aa17.12■□□□□ 0.33
C9orf3-217ENST00000479161 BMP2KQ9NSY1 1161 aaPredicted RBP17.12■□□□□ 0.33
C9orf3-217ENST00000479161 BLOC1S4Q9NUP1 217 aa17.12■□□□□ 0.33
C9orf3-217ENST00000479161 PRMT7Q9NVM4 692 aaPredicted RBP17.12■□□□□ 0.33
C9orf3-217ENST00000479161 LMCD1Q9NZU5 365 aa17.12■□□□□ 0.33
C9orf3-217ENST00000479161 LRFN2Q9ULH4 789 aa17.12■□□□□ 0.33
C9orf3-217ENST00000479161 ODF2LQ9ULJ1 636 aa17.12■□□□□ 0.33
C9orf3-217ENST00000479161 ZDHHC9Q9Y397 364 aa17.12■□□□□ 0.33
C9orf3-217ENST00000479161 RBM19Q9Y4C8 960 aaKnown RBP17.12■□□□□ 0.33
C9orf3-217ENST00000479161 ADGRA3Q8IWK6 1321 aa17.12■□□□□ 0.33
C9orf3-217ENST00000479161 LCHNA4D1U4 455 aa17.11■□□□□ 0.33
C9orf3-217ENST00000479161 CARNS1A5YM72 827 aa17.11■□□□□ 0.33
C9orf3-217ENST00000479161 C5orf67F2Z3F1 127 aa17.11■□□□□ 0.33
C9orf3-217ENST00000479161 CUTAO60888 179 aa17.11■□□□□ 0.33
C9orf3-217ENST00000479161 ERLIN2O94905 339 aa17.11■□□□□ 0.33
C9orf3-217ENST00000479161 RB1P06400 928 aa17.11■□□□□ 0.33
C9orf3-217ENST00000479161 CEBPZQ03701 1054 aaKnown RBP17.11■□□□□ 0.33
C9orf3-217ENST00000479161 AMHR2Q16671 573 aa17.11■□□□□ 0.33
C9orf3-217ENST00000479161 CCDC73Q6ZRK6 1079 aa17.11■□□□□ 0.33
C9orf3-217ENST00000479161 MRPL10Q7Z7H8 261 aaKnown RBP17.11■□□□□ 0.33
C9orf3-217ENST00000479161 ZBTB8OSQ8IWT0 167 aa17.11■□□□□ 0.33
C9orf3-217ENST00000479161 DAW1Q8N136 415 aa17.11■□□□□ 0.33
C9orf3-217ENST00000479161 SPRYD3Q8NCJ5 442 aa17.11■□□□□ 0.33
C9orf3-217ENST00000479161 SPIRE2Q8WWL2 714 aa17.11■□□□□ 0.33
C9orf3-217ENST00000479161 SYMPKQ92797 1274 aaKnown RBP17.11■□□□□ 0.33
C9orf3-217ENST00000479161 EPSTI1Q96J88 318 aa17.11■□□□□ 0.33
C9orf3-217ENST00000479161 PLVAPQ9BX97 442 aa17.11■□□□□ 0.33
C9orf3-217ENST00000479161 TFIP11Q9UBB9 837 aaKnown RBP17.11■□□□□ 0.33
C9orf3-217ENST00000479161 PIN4Q9Y237 131 aaKnown RBP17.11■□□□□ 0.33
C9orf3-217ENST00000479161 UNC80Q8N2C7 3258 aa17.11■□□□□ 0.33
C9orf3-217ENST00000479161 A0A1B0GUA9 196 aa17.1■□□□□ 0.33
C9orf3-217ENST00000479161 INO80B-WBP1J3KQ70 363 aa17.1■□□□□ 0.33
C9orf3-217ENST00000479161 TSPAN1O60635 241 aa17.1■□□□□ 0.33
C9orf3-217ENST00000479161 CSDE1O75534 798 aaKnown RBP17.1■□□□□ 0.33
C9orf3-217ENST00000479161 PLCG1P19174 1290 aa17.1■□□□□ 0.33
C9orf3-217ENST00000479161 FGFR4P22455 802 aa17.1■□□□□ 0.33
C9orf3-217ENST00000479161 NUCB2P80303 420 aa17.1■□□□□ 0.33
C9orf3-217ENST00000479161 MAPK7Q13164 816 aa17.1■□□□□ 0.33
C9orf3-217ENST00000479161 KARSQ15046 597 aaKnown RBP17.1■□□□□ 0.33
C9orf3-217ENST00000479161 NAALADL2Q58DX5 795 aa17.1■□□□□ 0.33
C9orf3-217ENST00000479161 TWF2Q6IBS0 349 aaKnown RBP17.1■□□□□ 0.33
C9orf3-217ENST00000479161 FAM117BQ6P1L5 589 aa17.1■□□□□ 0.33
C9orf3-217ENST00000479161 NOTUMQ6P988 496 aa17.1■□□□□ 0.33
C9orf3-217ENST00000479161 FIBCD1Q8N539 461 aa17.1■□□□□ 0.33
C9orf3-217ENST00000479161 LARP4BQ92615 738 aaKnown RBP17.1■□□□□ 0.33
C9orf3-217ENST00000479161 RAD54LQ92698 747 aa17.1■□□□□ 0.33
C9orf3-217ENST00000479161 CLIC6Q96NY7 704 aa17.1■□□□□ 0.33
C9orf3-217ENST00000479161 RUSC1Q9BVN2 902 aa17.1■□□□□ 0.33
C9orf3-217ENST00000479161 TMEM117Q9H0C3 514 aa17.1■□□□□ 0.33
C9orf3-217ENST00000479161 TMEM134Q9H6X4 195 aa17.1■□□□□ 0.33
C9orf3-217ENST00000479161 FAM105AQ9NUU6 356 aa17.1■□□□□ 0.33
C9orf3-217ENST00000479161 ZMYM2Q9UBW7 1377 aa17.1■□□□□ 0.33
C9orf3-217ENST00000479161 LRRIQ4A6NIV6 560 aa17.09■□□□□ 0.33
C9orf3-217ENST00000479161 ACKR2O00590 384 aa17.09■□□□□ 0.33
C9orf3-217ENST00000479161 HIP1RO75146 1068 aa17.09■□□□□ 0.33
C9orf3-217ENST00000479161 LINC00271P0C7V0 271 aa17.09■□□□□ 0.33
C9orf3-217ENST00000479161 ABCD1P33897 745 aa17.09■□□□□ 0.33
C9orf3-217ENST00000479161 ZNF131P52739 623 aa17.09■□□□□ 0.33
C9orf3-217ENST00000479161 DMP1Q13316 513 aaPredicted RBP17.09■□□□□ 0.33
C9orf3-217ENST00000479161 BTG3Q14201 252 aaPredicted RBP17.09■□□□□ 0.33
C9orf3-217ENST00000479161 ZRSR1Q15695 479 aaKnown RBP17.09■□□□□ 0.33
C9orf3-217ENST00000479161 MAPK6Q16659 721 aa17.09■□□□□ 0.33
C9orf3-217ENST00000479161 ARSHQ5FYA8 562 aa17.09■□□□□ 0.33
C9orf3-217ENST00000479161 AXDND1Q5T1B0 1012 aaPredicted RBP17.09■□□□□ 0.33
C9orf3-217ENST00000479161 USP49Q70CQ1 688 aa17.09■□□□□ 0.33
C9orf3-217ENST00000479161 MAEAQ7L5Y9 396 aa17.09■□□□□ 0.33
C9orf3-217ENST00000479161 BSNDQ8WZ55 320 aa17.09■□□□□ 0.33
C9orf3-217ENST00000479161 PGBD4Q96DM1 585 aa17.09■□□□□ 0.33
C9orf3-217ENST00000479161 CCDC113Q9H0I3 377 aa17.09■□□□□ 0.33
C9orf3-217ENST00000479161 CUEDC2Q9H467 287 aa17.09■□□□□ 0.33
C9orf3-217ENST00000479161 UBN1Q9NPG3 1134 aa17.09■□□□□ 0.33
C9orf3-217ENST00000479161 LARSQ9P2J5 1176 aaKnown RBP17.09■□□□□ 0.33
C9orf3-217ENST00000479161 ARHGAP28Q9P2N2 729 aa17.09■□□□□ 0.33
C9orf3-217ENST00000479161 CUL9Q8IWT3 2517 aa17.09■□□□□ 0.33
C9orf3-217ENST00000479161 CNTNAP2Q9UHC6 1331 aa17.08■□□□□ 0.32
C9orf3-217ENST00000479161 H0YCG3 227 aa17.08■□□□□ 0.32
C9orf3-217ENST00000479161 ARHGEF15O94989 841 aa17.08■□□□□ 0.32
C9orf3-217ENST00000479161 PLS3P13797 630 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms