RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 MARCKSL1P49006 195 aa11.73□□□□□ -0.53
VPS52-217ENST00000478934 TNNC1P63316 161 aa11.73□□□□□ -0.53
VPS52-217ENST00000478934 MKRN4PQ13434 485 aaPredicted RBP11.73□□□□□ -0.53
VPS52-217ENST00000478934 UAP1Q16222 522 aaPredicted RBP11.73□□□□□ -0.53
VPS52-217ENST00000478934 C1orf220Q5T0J3 134 aa11.73□□□□□ -0.53
VPS52-217ENST00000478934 C10orf76Q5T2E6 689 aa11.73□□□□□ -0.53
VPS52-217ENST00000478934 ALS2CLQ60I27 953 aa11.73□□□□□ -0.53
VPS52-217ENST00000478934 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.73□□□□□ -0.536e-8■■■□□ 18.3
VPS52-217ENST00000478934 ERVK-5Q9HDB9 667 aa11.73□□□□□ -0.53
VPS52-217ENST00000478934 FBXL5Q9UKA1 691 aa11.73□□□□□ -0.53
VPS52-217ENST00000478934 USP20Q9Y2K6 914 aa11.73□□□□□ -0.53
VPS52-217ENST00000478934 ASTN2O75129 1339 aaPredicted RBP11.72□□□□□ -0.53
VPS52-217ENST00000478934 GTPBP10A4D1E9 387 aaKnown RBP11.72□□□□□ -0.53
VPS52-217ENST00000478934 PGRMC1O00264 195 aaKnown RBP11.72□□□□□ -0.53
VPS52-217ENST00000478934 PPP1R12BO60237 982 aaPredicted RBP11.72□□□□□ -0.53
VPS52-217ENST00000478934 PTGER2P43116 358 aa11.72□□□□□ -0.53
VPS52-217ENST00000478934 MAGEA9P43362 315 aa11.72□□□□□ -0.53
VPS52-217ENST00000478934 VPS36Q86VN1 386 aa11.72□□□□□ -0.53
VPS52-217ENST00000478934 ACTRT1Q8TDG2 376 aa11.72□□□□□ -0.53
VPS52-217ENST00000478934 ALG3Q92685 438 aa11.72□□□□□ -0.53
VPS52-217ENST00000478934 STRA6Q9BX79 667 aa11.72□□□□□ -0.53
VPS52-217ENST00000478934 STK24Q9Y6E0 443 aa11.72□□□□□ -0.53
VPS52-217ENST00000478934 EBAG9O00559 213 aa11.72□□□□□ -0.53
VPS52-217ENST00000478934 TNFAIP3P21580 790 aa11.72□□□□□ -0.53
VPS52-217ENST00000478934 HSD17B3P37058 310 aa11.72□□□□□ -0.53
VPS52-217ENST00000478934 TKFCQ3LXA3 575 aa11.72□□□□□ -0.53
VPS52-217ENST00000478934 CHADLQ6NUI6 762 aa11.72□□□□□ -0.53
VPS52-217ENST00000478934 GLG1Q92896 1179 aa11.72□□□□□ -0.53
VPS52-217ENST00000478934 SAAL1Q96ER3 474 aa11.72□□□□□ -0.53
VPS52-217ENST00000478934 HES6Q96HZ4 224 aa11.72□□□□□ -0.53
VPS52-217ENST00000478934 PBKQ96KB5 322 aa11.72□□□□□ -0.53
VPS52-217ENST00000478934 BTBD6Q96KE9 485 aa11.72□□□□□ -0.53
VPS52-217ENST00000478934 TSPYL1Q9H0U9 437 aa11.72□□□□□ -0.53
VPS52-217ENST00000478934 TAF1DQ9H5J8 278 aaPredicted RBP11.72□□□□□ -0.53
VPS52-217ENST00000478934 DCDC2CA8MYV0 355 aa11.71□□□□□ -0.53
VPS52-217ENST00000478934 WNT10BO00744 389 aa11.71□□□□□ -0.53
VPS52-217ENST00000478934 DDX3YO15523 660 aaKnown RBP11.71□□□□□ -0.53
VPS52-217ENST00000478934 NR1D1P20393 614 aa11.71□□□□□ -0.53
VPS52-217ENST00000478934 GUCY2CP25092 1073 aa11.71□□□□□ -0.53
VPS52-217ENST00000478934 RARRES1P49788 294 aa11.71□□□□□ -0.53
VPS52-217ENST00000478934 PEX3P56589 373 aa11.71□□□□□ -0.53
VPS52-217ENST00000478934 UBLCP1Q8WVY7 318 aaPredicted RBP11.71□□□□□ -0.53
VPS52-217ENST00000478934 ISCUQ9H1K1 167 aa11.71□□□□□ -0.53
VPS52-217ENST00000478934 SUCLA2Q9P2R7 463 aaPredicted RBP11.71□□□□□ -0.53
VPS52-217ENST00000478934 PGAP2Q9UHJ9 254 aa11.71□□□□□ -0.53
VPS52-217ENST00000478934 FEM1BQ9UK73 627 aa11.71□□□□□ -0.53
VPS52-217ENST00000478934 KIF13BQ9NQT8 1826 aa11.71□□□□□ -0.54
VPS52-217ENST00000478934 ANKRD63C9JTQ0 380 aa11.71□□□□□ -0.54
VPS52-217ENST00000478934 SGPL1O95470 568 aa11.71□□□□□ -0.54
VPS52-217ENST00000478934 ADRB2P07550 413 aa11.71□□□□□ -0.54
VPS52-217ENST00000478934 DPEP1P16444 411 aa11.71□□□□□ -0.54
VPS52-217ENST00000478934 TMOD1P28289 359 aa11.71□□□□□ -0.54
VPS52-217ENST00000478934 HSD17B4P51659 736 aa11.71□□□□□ -0.54
VPS52-217ENST00000478934 PPATQ06203 517 aa11.71□□□□□ -0.54
VPS52-217ENST00000478934 TTC31Q49AM3 519 aaPredicted RBP11.71□□□□□ -0.54
VPS52-217ENST00000478934 RUBCNQ92622 972 aa11.71□□□□□ -0.54
VPS52-217ENST00000478934 KRT35Q92764 455 aa11.71□□□□□ -0.54
VPS52-217ENST00000478934 KAT2BQ92831 832 aa11.71□□□□□ -0.54
VPS52-217ENST00000478934 CCDC127Q96BQ5 260 aa11.71□□□□□ -0.54
VPS52-217ENST00000478934 PCDHB18PQ96TA0 734 aa11.71□□□□□ -0.54
VPS52-217ENST00000478934 AGO4Q9HCK5 861 aaKnown RBP11.71□□□□□ -0.54
VPS52-217ENST00000478934 PPANQ9NQ55 473 aaKnown RBP11.71□□□□□ -0.54
VPS52-217ENST00000478934 TOPORSQ9NS56 1045 aaPredicted RBP11.71□□□□□ -0.54
VPS52-217ENST00000478934 AMFRQ9UKV5 643 aa11.71□□□□□ -0.54
VPS52-217ENST00000478934 ODF2LQ9ULJ1 636 aa11.71□□□□□ -0.54
VPS52-217ENST00000478934 CCNE2O96020 404 aa11.7□□□□□ -0.54
VPS52-217ENST00000478934 ICAM1P05362 532 aa11.7□□□□□ -0.54
VPS52-217ENST00000478934 LSP1P33241 339 aa11.7□□□□□ -0.54
VPS52-217ENST00000478934 VAMP7P51809 220 aa11.7□□□□□ -0.54
VPS52-217ENST00000478934 SP4Q02446 784 aa11.7□□□□□ -0.54
VPS52-217ENST00000478934 MAP2K1Q02750 393 aaPredicted RBP11.7□□□□□ -0.54
VPS52-217ENST00000478934 IFI16Q16666 785 aaKnown RBP11.7□□□□□ -0.54
VPS52-217ENST00000478934 UBAP2Q5T6F2 1119 aaKnown RBP11.7□□□□□ -0.54
VPS52-217ENST00000478934 PRAMEF18Q5VWM3 479 aa11.7□□□□□ -0.54
VPS52-217ENST00000478934 FBXW10Q5XX13 1052 aa11.7□□□□□ -0.54
VPS52-217ENST00000478934 CBWD2Q8IUF1 395 aa11.7□□□□□ -0.54
VPS52-217ENST00000478934 SYTL5Q8TDW5 730 aaPredicted RBP11.7□□□□□ -0.54
VPS52-217ENST00000478934 CTNNBL1Q8WYA6 563 aaPredicted RBP11.7□□□□□ -0.54
VPS52-217ENST00000478934 SEMA4DQ92854 862 aa11.7□□□□□ -0.54
VPS52-217ENST00000478934 MKNK1Q9BUB5 465 aa11.7□□□□□ -0.54
VPS52-217ENST00000478934 HSPBP1Q9NZL4 362 aa11.7□□□□□ -0.54
VPS52-217ENST00000478934 RBBP6Q7Z6E9 1792 aaKnown RBP11.7□□□□□ -0.54
VPS52-217ENST00000478934 FTLP02792 175 aaPredicted RBP11.7□□□□□ -0.54
VPS52-217ENST00000478934 LMNB1P20700 586 aa11.7□□□□□ -0.54
VPS52-217ENST00000478934 KCNA3P22001 575 aa11.7□□□□□ -0.54
VPS52-217ENST00000478934 YWHABP31946 246 aaKnown RBP11.7□□□□□ -0.54
VPS52-217ENST00000478934 CTNNA1P35221 906 aaKnown RBP11.7□□□□□ -0.54
VPS52-217ENST00000478934 RPS6P62753 249 aaKnown RBP11.7□□□□□ -0.54
VPS52-217ENST00000478934 CXCL9Q07325 125 aa11.7□□□□□ -0.54
VPS52-217ENST00000478934 MTMR1Q13613 665 aa11.7□□□□□ -0.54
VPS52-217ENST00000478934 RASA3Q14644 834 aa11.7□□□□□ -0.54
VPS52-217ENST00000478934 FAM102BQ5T8I3 360 aa11.7□□□□□ -0.54
VPS52-217ENST00000478934 HAUS6Q7Z4H7 955 aa11.7□□□□□ -0.54
VPS52-217ENST00000478934 RPUSD2Q8IZ73 545 aaKnown RBP11.7□□□□□ -0.54
VPS52-217ENST00000478934 ZDHHC14Q8IZN3 488 aa11.7□□□□□ -0.54
VPS52-217ENST00000478934 RASGEF1CQ8N431 466 aa11.7□□□□□ -0.54
VPS52-217ENST00000478934 TTLL6Q8N841 843 aa11.7□□□□□ -0.54
VPS52-217ENST00000478934 RFFLQ8WZ73 363 aa11.7□□□□□ -0.54
VPS52-217ENST00000478934 AGPAT1Q99943 283 aa11.7□□□□□ -0.54
VPS52-217ENST00000478934 SEL1LQ9UBV2 794 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms