RNA–Protein interactions for RNA: ENST00000478913.1

CCDC171-207, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-207ENST00000478913 NME9Q86XW9 330 aa6.86□□□□□ -1.31
CCDC171-207ENST00000478913 TMEM151BQ8IW70 566 aa6.86□□□□□ -1.31
CCDC171-207ENST00000478913 WDR66Q8TBY9 1149 aa6.86□□□□□ -1.31
CCDC171-207ENST00000478913 DACT3Q96B18 629 aaPredicted RBP6.86□□□□□ -1.31
CCDC171-207ENST00000478913 GPATCH3Q96I76 525 aa6.86□□□□□ -1.31
CCDC171-207ENST00000478913 IRF2BPLQ9H1B7 796 aa6.86□□□□□ -1.31
CCDC171-207ENST00000478913 GALNT8Q9NY28 637 aa6.86□□□□□ -1.31
CCDC171-207ENST00000478913 USP32Q8NFA0 1604 aa6.86□□□□□ -1.31
CCDC171-207ENST00000478913 UBA6A0AVT1 1052 aaPredicted RBP6.85□□□□□ -1.31
CCDC171-207ENST00000478913 GOLGA6L22H0YM25 854 aa6.85□□□□□ -1.31
CCDC171-207ENST00000478913 ULK1O75385 1050 aa6.85□□□□□ -1.31
CCDC171-207ENST00000478913 MPIG6BO95866 241 aa6.85□□□□□ -1.31
CCDC171-207ENST00000478913 CD40P25942 277 aa6.85□□□□□ -1.31
CCDC171-207ENST00000478913 PHC1P78364 1004 aa6.85□□□□□ -1.31
CCDC171-207ENST00000478913 SMAD3P84022 425 aaKnown RBP6.85□□□□□ -1.31
CCDC171-207ENST00000478913 CAP1Q01518 475 aa6.85□□□□□ -1.31
CCDC171-207ENST00000478913 SMAD2Q15796 467 aaKnown RBP6.85□□□□□ -1.31
CCDC171-207ENST00000478913 VWA3BQ502W6 1294 aa6.85□□□□□ -1.31
CCDC171-207ENST00000478913 HDGFL2Q7Z4V5 671 aaPredicted RBP6.85□□□□□ -1.31
CCDC171-207ENST00000478913 RTN4RL1Q86UN2 441 aaPredicted RBP6.85□□□□□ -1.31
CCDC171-207ENST00000478913 CILP2Q8IUL8 1156 aa6.85□□□□□ -1.31
CCDC171-207ENST00000478913 WDR48Q8TAF3 677 aa6.85□□□□□ -1.31
CCDC171-207ENST00000478913 CALML6Q8TD86 181 aa6.85□□□□□ -1.31
CCDC171-207ENST00000478913 SLC5A5Q92911 643 aa6.85□□□□□ -1.31
CCDC171-207ENST00000478913 C16orf92Q96LL3 132 aa6.85□□□□□ -1.31
CCDC171-207ENST00000478913 TOX2Q96NM4 488 aa6.85□□□□□ -1.31
CCDC171-207ENST00000478913 TACO1Q9BSH4 297 aaKnown RBP6.85□□□□□ -1.31
CCDC171-207ENST00000478913 BRINP2Q9C0B6 783 aa6.85□□□□□ -1.31
CCDC171-207ENST00000478913 ZMAT4Q9H898 229 aa6.85□□□□□ -1.31
CCDC171-207ENST00000478913 KCPQ6ZWJ8 1503 aa6.85□□□□□ -1.31
CCDC171-207ENST00000478913 SYCP2Q9BX26 1530 aa6.85□□□□□ -1.31
CCDC171-207ENST00000478913 UNC79Q9P2D8 2635 aa6.84□□□□□ -1.31
CCDC171-207ENST00000478913 hCG_2014768A0A024R1R8 64 aa6.84□□□□□ -1.31
CCDC171-207ENST00000478913 GPR39O43194 453 aa6.84□□□□□ -1.31
CCDC171-207ENST00000478913 RPL13P26373 211 aaKnown RBP6.84□□□□□ -1.31
CCDC171-207ENST00000478913 LSP1P33241 339 aa6.84□□□□□ -1.31
CCDC171-207ENST00000478913 ADCY1Q08828 1119 aa6.84□□□□□ -1.31
CCDC171-207ENST00000478913 RTP5Q14D33 572 aa6.84□□□□□ -1.31
CCDC171-207ENST00000478913 GPR158Q5T848 1215 aa6.84□□□□□ -1.31
CCDC171-207ENST00000478913 TCERG1LQ5VWI1 586 aa6.84□□□□□ -1.31
CCDC171-207ENST00000478913 LHFPL2Q6ZUX7 228 aa6.84□□□□□ -1.31
CCDC171-207ENST00000478913 SPATS2Q86XZ4 545 aaKnown RBP6.84□□□□□ -1.31
CCDC171-207ENST00000478913 STPG3Q8N7X2 389 aa6.84□□□□□ -1.31
CCDC171-207ENST00000478913 C7orf31Q8N865 590 aa6.84□□□□□ -1.31
CCDC171-207ENST00000478913 RTF1Q92541 710 aaKnown RBP6.84□□□□□ -1.31
CCDC171-207ENST00000478913 FOXRED1Q96CU9 486 aaPredicted RBP6.84□□□□□ -1.31
CCDC171-207ENST00000478913 FOXB1Q99853 325 aa6.84□□□□□ -1.31
CCDC171-207ENST00000478913 AMNQ9BXJ7 453 aa6.84□□□□□ -1.31
CCDC171-207ENST00000478913 KCND1Q9NSA2 647 aa6.84□□□□□ -1.31
CCDC171-207ENST00000478913 SPATA6Q9NWH7 488 aaPredicted RBP6.84□□□□□ -1.31
CCDC171-207ENST00000478913 NTMQ9P121 344 aa6.84□□□□□ -1.31
CCDC171-207ENST00000478913 NOP58Q9Y2X3 529 aaKnown RBP6.84□□□□□ -1.31
CCDC171-207ENST00000478913 NEXMIFQ5QGS0 1516 aa6.84□□□□□ -1.31
CCDC171-207ENST00000478913 ADGRB3O60242 1522 aa6.83□□□□□ -1.32
CCDC171-207ENST00000478913 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.83□□□□□ -1.32
CCDC171-207ENST00000478913 RAB11FIP3O75154 756 aa6.83□□□□□ -1.32
CCDC171-207ENST00000478913 IL18BPO95998 194 aa6.83□□□□□ -1.32
CCDC171-207ENST00000478913 ECE1P42892 770 aa6.83□□□□□ -1.32
CCDC171-207ENST00000478913 ALDH6A1Q02252 535 aaKnown RBP6.83□□□□□ -1.32
CCDC171-207ENST00000478913 ROM1Q03395 351 aa6.83□□□□□ -1.32
CCDC171-207ENST00000478913 DLX2Q07687 328 aaPredicted RBP6.83□□□□□ -1.32
CCDC171-207ENST00000478913 LRRC32Q14392 662 aa6.83□□□□□ -1.32
CCDC171-207ENST00000478913 TERF2Q15554 542 aa6.83□□□□□ -1.32
CCDC171-207ENST00000478913 ZNF827Q17R98 1081 aa6.83□□□□□ -1.32
CCDC171-207ENST00000478913 TTC38Q5R3I4 469 aa6.83□□□□□ -1.32
CCDC171-207ENST00000478913 BROXQ5VW32 411 aa6.83□□□□□ -1.32
CCDC171-207ENST00000478913 RNF219Q5W0B1 726 aaPredicted RBP6.83□□□□□ -1.32
CCDC171-207ENST00000478913 IQSEC1Q6DN90 963 aa6.83□□□□□ -1.32
CCDC171-207ENST00000478913 TRMT10BQ6PF06 316 aaKnown RBP6.83□□□□□ -1.32
CCDC171-207ENST00000478913 DPP8Q6V1X1 898 aaPredicted RBP6.83□□□□□ -1.32
CCDC171-207ENST00000478913 PHYKPLQ8IUZ5 450 aa6.83□□□□□ -1.32
CCDC171-207ENST00000478913 ZNF610Q8N9Z0 462 aa6.83□□□□□ -1.32
CCDC171-207ENST00000478913 TUBGCP5Q96RT8 1024 aa6.83□□□□□ -1.32
CCDC171-207ENST00000478913 BTBD2Q9BX70 525 aa6.83□□□□□ -1.32
CCDC171-207ENST00000478913 KRTAP9-3Q9BYQ3 159 aa6.83□□□□□ -1.32
CCDC171-207ENST00000478913 ADAMTS7Q9UKP4 1686 aa6.83□□□□□ -1.32
CCDC171-207ENST00000478913 PLEKHG1Q9ULL1 1385 aa6.82□□□□□ -1.32
CCDC171-207ENST00000478913 IGSF1Q8N6C5 1336 aa6.82□□□□□ -1.32
CCDC171-207ENST00000478913 SH3D21A4FU49 640 aa6.82□□□□□ -1.32
CCDC171-207ENST00000478913 DBX1A6NMT0 343 aa6.82□□□□□ -1.32
CCDC171-207ENST00000478913 FFAR3O14843 346 aa6.82□□□□□ -1.32
CCDC171-207ENST00000478913 PRLP01236 227 aa6.82□□□□□ -1.32
CCDC171-207ENST00000478913 CHGBP05060 677 aa6.82□□□□□ -1.32
CCDC171-207ENST00000478913 CDK11BP21127 795 aaKnown RBP6.82□□□□□ -1.32
CCDC171-207ENST00000478913 CDKN1CP49918 316 aaPredicted RBP6.82□□□□□ -1.32
CCDC171-207ENST00000478913 MLLT6P55198 1093 aaPredicted RBP6.82□□□□□ -1.32
CCDC171-207ENST00000478913 SESN3P58005 492 aa6.82□□□□□ -1.32
CCDC171-207ENST00000478913 IL13RA1P78552 427 aa6.82□□□□□ -1.32
CCDC171-207ENST00000478913 SLC6A3Q01959 620 aa6.82□□□□□ -1.32
CCDC171-207ENST00000478913 VMACQ2NL98 169 aa6.82□□□□□ -1.32
CCDC171-207ENST00000478913 PRR31Q5SQ13 230 aa6.82□□□□□ -1.32
CCDC171-207ENST00000478913 PRAMEF9Q5VWM5 478 aa6.82□□□□□ -1.32
CCDC171-207ENST00000478913 LRSAM1Q6UWE0 723 aa6.82□□□□□ -1.32
CCDC171-207ENST00000478913 LRRC56Q8IYG6 542 aaPredicted RBP6.82□□□□□ -1.32
CCDC171-207ENST00000478913 ADGRG2Q8IZP9 1017 aa6.82□□□□□ -1.32
CCDC171-207ENST00000478913 LINC01356Q8N9X3 169 aa6.82□□□□□ -1.32
CCDC171-207ENST00000478913 MAML3Q96JK9 1138 aa6.82□□□□□ -1.32
CCDC171-207ENST00000478913 L2HGDHQ9H9P8 463 aa6.82□□□□□ -1.32
CCDC171-207ENST00000478913 USP36Q9P275 1121 aaKnown RBP6.82□□□□□ -1.32
CCDC171-207ENST00000478913 UNC80Q8N2C7 3258 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms