RNA–Protein interactions for RNA: ENST00000478840.1

UPF3B-203, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3B, Length 748 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-203ENST00000478840 ZNF792Q3KQV3 632 aa6.46□□□□□ -1.38
UPF3B-203ENST00000478840 GRAMD1BQ3KR37 738 aa6.46□□□□□ -1.38
UPF3B-203ENST00000478840 C3orf36Q3SXR2 165 aa6.46□□□□□ -1.38
UPF3B-203ENST00000478840 ADGRF1Q5T601 910 aa6.46□□□□□ -1.38
UPF3B-203ENST00000478840 DARS2Q6PI48 645 aaKnown RBP6.46□□□□□ -1.38
UPF3B-203ENST00000478840 ZC3H18Q86VM9 953 aaKnown RBP6.46□□□□□ -1.38
UPF3B-203ENST00000478840 GLB1L3Q8NCI6 653 aaPredicted RBP6.46□□□□□ -1.38
UPF3B-203ENST00000478840 ALG3Q92685 438 aa6.46□□□□□ -1.38
UPF3B-203ENST00000478840 HIST1H2AHQ96KK5 128 aa6.46□□□□□ -1.38
UPF3B-203ENST00000478840 TNIP3Q96KP6 325 aa6.46□□□□□ -1.38
UPF3B-203ENST00000478840 CGRRF1Q99675 332 aa6.46□□□□□ -1.38
UPF3B-203ENST00000478840 MYD88Q99836 296 aa6.46□□□□□ -1.38
UPF3B-203ENST00000478840 HIST1H2AJQ99878 128 aa6.46□□□□□ -1.38
UPF3B-203ENST00000478840 NOL10Q9BSC4 688 aaKnown RBP6.46□□□□□ -1.38
UPF3B-203ENST00000478840 SLC6A17Q9H1V8 727 aa6.46□□□□□ -1.38
UPF3B-203ENST00000478840 BHMT2Q9H2M3 363 aa6.46□□□□□ -1.38
UPF3B-203ENST00000478840 PLCB1Q9NQ66 1216 aa6.46□□□□□ -1.38
UPF3B-203ENST00000478840 DLL4Q9NR61 685 aa6.46□□□□□ -1.38
UPF3B-203ENST00000478840 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.46□□□□□ -1.38
UPF3B-203ENST00000478840 PUF60Q9UHX1 559 aaKnown RBP6.46□□□□□ -1.38
UPF3B-203ENST00000478840 A0A0A6YYK5 440 aaPredicted RBP6.45□□□□□ -1.38
UPF3B-203ENST00000478840 KLRG2A4D1S0 409 aaPredicted RBP6.45□□□□□ -1.38
UPF3B-203ENST00000478840 CAPN8A6NHC0 703 aa6.45□□□□□ -1.38
UPF3B-203ENST00000478840 FOSP01100 380 aaPredicted RBP6.45□□□□□ -1.38
UPF3B-203ENST00000478840 SDHBP21912 280 aa6.45□□□□□ -1.38
UPF3B-203ENST00000478840 NRG3P56975 720 aa6.45□□□□□ -1.38
UPF3B-203ENST00000478840 SKIDA1Q1XH10 827 aa6.45□□□□□ -1.38
UPF3B-203ENST00000478840 ERAP2Q6P179 960 aa6.45□□□□□ -1.38
UPF3B-203ENST00000478840 SRLQ86TD4 932 aa6.45□□□□□ -1.38
UPF3B-203ENST00000478840 GLB1L2Q8IW92 636 aa6.45□□□□□ -1.38
UPF3B-203ENST00000478840 FAM186BQ8IYM0 893 aa6.45□□□□□ -1.38
UPF3B-203ENST00000478840 PGBD4Q96DM1 585 aa6.45□□□□□ -1.38
UPF3B-203ENST00000478840 TMEM209Q96SK2 561 aa6.45□□□□□ -1.38
UPF3B-203ENST00000478840 FDXACB1Q9BRP7 624 aaPredicted RBP6.45□□□□□ -1.38
UPF3B-203ENST00000478840 SOX7Q9BT81 388 aa6.45□□□□□ -1.38
UPF3B-203ENST00000478840 ADI1Q9BV57 179 aa6.45□□□□□ -1.38
UPF3B-203ENST00000478840 KMT5AQ9NQR1 393 aa6.45□□□□□ -1.38
UPF3B-203ENST00000478840 RBM12Q9NTZ6 932 aaKnown RBP6.45□□□□□ -1.38
UPF3B-203ENST00000478840 RBPJLQ9UBG7 517 aa6.45□□□□□ -1.38
UPF3B-203ENST00000478840 SYNPO2Q9UMS6 1093 aa6.45□□□□□ -1.38
UPF3B-203ENST00000478840 STXBP5LQ9Y2K9 1186 aa6.45□□□□□ -1.38
UPF3B-203ENST00000478840 A0A088AWK7 358 aa6.44□□□□□ -1.38
UPF3B-203ENST00000478840 OR14I1A6ND48 311 aa6.44□□□□□ -1.38
UPF3B-203ENST00000478840 FAM171A2A8MVW0 826 aa6.44□□□□□ -1.38
UPF3B-203ENST00000478840 SGTAO43765 313 aa6.44□□□□□ -1.38
UPF3B-203ENST00000478840 WNT11O96014 354 aa6.44□□□□□ -1.38
UPF3B-203ENST00000478840 GSPT1P15170 499 aaKnown RBP6.44□□□□□ -1.38
UPF3B-203ENST00000478840 ZKSCAN1P17029 563 aaPredicted RBP6.44□□□□□ -1.38
UPF3B-203ENST00000478840 XPAP23025 273 aaPredicted RBP6.44□□□□□ -1.38
UPF3B-203ENST00000478840 SSTR4P31391 388 aa6.44□□□□□ -1.38
UPF3B-203ENST00000478840 IL13RA1P78552 427 aa6.44□□□□□ -1.38
UPF3B-203ENST00000478840 MEF2AQ02078 507 aaPredicted RBP6.44□□□□□ -1.38
UPF3B-203ENST00000478840 CACNB2Q08289 660 aaPredicted RBP6.44□□□□□ -1.38
UPF3B-203ENST00000478840 DGKDQ16760 1214 aa6.44□□□□□ -1.38
UPF3B-203ENST00000478840 THEMIS2Q5TEJ8 643 aa6.44□□□□□ -1.38
UPF3B-203ENST00000478840 RNF220Q5VTB9 566 aa6.44□□□□□ -1.38
UPF3B-203ENST00000478840 PPP4R3AQ6IN85 833 aa6.44□□□□□ -1.38
UPF3B-203ENST00000478840 MIGA2Q7L4E1 593 aa6.44□□□□□ -1.38
UPF3B-203ENST00000478840 TTC7BQ86TV6 843 aa6.44□□□□□ -1.38
UPF3B-203ENST00000478840 IRF2BP1Q8IU81 584 aa6.44□□□□□ -1.38
UPF3B-203ENST00000478840 TP53INP2Q8IXH6 220 aa6.44□□□□□ -1.38
UPF3B-203ENST00000478840 IFNL2Q8IZJ0 200 aa6.44□□□□□ -1.38
UPF3B-203ENST00000478840 OR5AN1Q8NGI8 311 aa6.44□□□□□ -1.38
UPF3B-203ENST00000478840 NSUN6Q8TEA1 469 aaKnown RBP6.44□□□□□ -1.38
UPF3B-203ENST00000478840 PARD3BQ8TEW8 1205 aa6.44□□□□□ -1.38
UPF3B-203ENST00000478840 HOXB13Q92826 284 aaPredicted RBP6.44□□□□□ -1.38
UPF3B-203ENST00000478840 DDX11Q96FC9 970 aa6.44□□□□□ -1.38
UPF3B-203ENST00000478840 OSBPL6Q9BZF3 934 aa6.44□□□□□ -1.38
UPF3B-203ENST00000478840 NUP62CLQ9H1M0 184 aa6.44□□□□□ -1.38
UPF3B-203ENST00000478840 BCAS3Q9H6U6 928 aa6.44□□□□□ -1.38
UPF3B-203ENST00000478840 PTPRHQ9HD43 1115 aa6.44□□□□□ -1.38
UPF3B-203ENST00000478840 POLHQ9Y253 713 aa6.44□□□□□ -1.38
UPF3B-203ENST00000478840 ABHD14A-ACY1A0A1B0GW23 586 aa6.43□□□□□ -1.38
UPF3B-203ENST00000478840 FRS3O43559 492 aa6.43□□□□□ -1.38
UPF3B-203ENST00000478840 PQBP1O60828 265 aaKnown RBP6.43□□□□□ -1.38
UPF3B-203ENST00000478840 ADAMTS4O75173 837 aa6.43□□□□□ -1.38
UPF3B-203ENST00000478840 TCEA3O75764 348 aa6.43□□□□□ -1.38
UPF3B-203ENST00000478840 IL18BPO95998 194 aa6.43□□□□□ -1.38
UPF3B-203ENST00000478840 RPLP2P05387 115 aaKnown RBP6.43□□□□□ -1.38
UPF3B-203ENST00000478840 C8BP07358 591 aa6.43□□□□□ -1.38
UPF3B-203ENST00000478840 SETSIPP0DME0 302 aa6.43□□□□□ -1.38
UPF3B-203ENST00000478840 PEX2P28328 305 aa6.43□□□□□ -1.38
UPF3B-203ENST00000478840 PDE6BP35913 854 aa6.43□□□□□ -1.38
UPF3B-203ENST00000478840 MAP2K6P52564 334 aa6.43□□□□□ -1.38
UPF3B-203ENST00000478840 GPSM2P81274 684 aa6.43□□□□□ -1.38
UPF3B-203ENST00000478840 CNN3Q15417 329 aaKnown RBP6.43□□□□□ -1.38
UPF3B-203ENST00000478840 LONRF1Q17RB8 773 aa6.43□□□□□ -1.38
UPF3B-203ENST00000478840 INO80DQ53TQ3 878 aaPredicted RBP6.43□□□□□ -1.38
UPF3B-203ENST00000478840 OLFML2BQ68BL8 750 aa6.43□□□□□ -1.38
UPF3B-203ENST00000478840 SWSAP1Q6NVH7 229 aa6.43□□□□□ -1.38
UPF3B-203ENST00000478840 XRRA1Q6P2D8 792 aa6.43□□□□□ -1.38
UPF3B-203ENST00000478840 DPP8Q6V1X1 898 aaPredicted RBP6.43□□□□□ -1.38
UPF3B-203ENST00000478840 MAEAQ7L5Y9 396 aa6.43□□□□□ -1.38
UPF3B-203ENST00000478840 FAM26EQ8N5C1 309 aa6.43□□□□□ -1.38
UPF3B-203ENST00000478840 OR2I1PQ8NGU4 316 aa6.43□□□□□ -1.38
UPF3B-203ENST00000478840 KLHDC4Q8TBB5 520 aa6.43□□□□□ -1.38
UPF3B-203ENST00000478840 ZNF526Q8TF50 670 aaPredicted RBP6.43□□□□□ -1.38
UPF3B-203ENST00000478840 RIN2Q8WYP3 895 aaPredicted RBP6.43□□□□□ -1.38
UPF3B-203ENST00000478840 EVI5LQ96CN4 794 aa6.43□□□□□ -1.38
UPF3B-203ENST00000478840 CDK5RAP3Q96JB5 506 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms