RNA–Protein interactions for RNA: ENST00000478746.1

VIM-204, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 757 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-204ENST00000478746 KRBA1A5PL33 1030 aa19.35■□□□□ 0.69
VIM-204ENST00000478746 ZNF623O75123 536 aa19.35■□□□□ 0.69
VIM-204ENST00000478746 ALDH2P05091 517 aa19.35■□□□□ 0.69
VIM-204ENST00000478746 SFPQP23246 707 aaKnown RBP eCLIP19.35■□□□□ 0.69
VIM-204ENST00000478746 GBP2P32456 591 aaPredicted RBP19.35■□□□□ 0.69
VIM-204ENST00000478746 DNM2P50570 870 aa19.35■□□□□ 0.69
VIM-204ENST00000478746 DRP2Q13474 957 aa19.35■□□□□ 0.69
VIM-204ENST00000478746 PFKFB3Q16875 520 aaPredicted RBP19.35■□□□□ 0.69
VIM-204ENST00000478746 ZNF280BQ86YH2 543 aa19.35■□□□□ 0.69
VIM-204ENST00000478746 RSAD2Q8WXG1 361 aa19.35■□□□□ 0.69
VIM-204ENST00000478746 FDXACB1Q9BRP7 624 aaPredicted RBP19.35■□□□□ 0.69
VIM-204ENST00000478746 ZMYND12Q9H0C1 365 aa19.35■□□□□ 0.69
VIM-204ENST00000478746 C6orf50Q9HD87 102 aa19.35■□□□□ 0.69
VIM-204ENST00000478746 MRPL17Q9NRX2 175 aaKnown RBP19.35■□□□□ 0.69
VIM-204ENST00000478746 FAM105AQ9NUU6 356 aa19.35■□□□□ 0.69
VIM-204ENST00000478746 PIN4Q9Y237 131 aaKnown RBP19.35■□□□□ 0.69
VIM-204ENST00000478746 FRYLO94915 3013 aa19.34■□□□□ 0.69
VIM-204ENST00000478746 C2orf16Q68DN1 1984 aa19.34■□□□□ 0.69
VIM-204ENST00000478746 CCDC195A0A1B0GUA6 201 aa19.34■□□□□ 0.69
VIM-204ENST00000478746 GOLGA8AA7E2F4 631 aa19.34■□□□□ 0.69
VIM-204ENST00000478746 MEIS3P2A8K0S8 358 aa19.34■□□□□ 0.69
VIM-204ENST00000478746 GOLGA8BA8MQT2 603 aa19.34■□□□□ 0.69
VIM-204ENST00000478746 ADAMTS3O15072 1205 aa19.34■□□□□ 0.69
VIM-204ENST00000478746 LILRB3O75022 631 aa19.34■□□□□ 0.69
VIM-204ENST00000478746 CIITAP33076 1130 aa19.34■□□□□ 0.69
VIM-204ENST00000478746 TARBP2Q15633 366 aaKnown RBP19.34■□□□□ 0.69
VIM-204ENST00000478746 UGCGQ16739 394 aa19.34■□□□□ 0.69
VIM-204ENST00000478746 REXO1Q8N1G1 1221 aaKnown RBP19.34■□□□□ 0.69
VIM-204ENST00000478746 SLC44A3Q8N4M1 653 aa19.34■□□□□ 0.69
VIM-204ENST00000478746 URGCPQ8TCY9 931 aa19.34■□□□□ 0.69
VIM-204ENST00000478746 RIN2Q8WYP3 895 aaPredicted RBP19.34■□□□□ 0.69
VIM-204ENST00000478746 PGBD4Q96DM1 585 aa19.34■□□□□ 0.69
VIM-204ENST00000478746 FAM217BQ9NTX9 383 aaPredicted RBP19.34■□□□□ 0.69
VIM-204ENST00000478746 CA14Q9ULX7 337 aa19.34■□□□□ 0.69
VIM-204ENST00000478746 FAN1Q9Y2M0 1017 aa19.34■□□□□ 0.69
VIM-204ENST00000478746 ESYT2A0FGR8 921 aa19.33■□□□□ 0.68
VIM-204ENST00000478746 N4BP1O75113 896 aaKnown RBP19.33■□□□□ 0.68
VIM-204ENST00000478746 CDC27P30260 824 aa19.33■□□□□ 0.68
VIM-204ENST00000478746 SFNP31947 248 aa19.33■□□□□ 0.68
VIM-204ENST00000478746 RAB27AP51159 221 aa19.33■□□□□ 0.68
VIM-204ENST00000478746 EXOSC10Q01780 885 aaKnown RBP19.33■□□□□ 0.68
VIM-204ENST00000478746 PUM1Q14671 1186 aaKnown RBP eCLIP19.33■□□□□ 0.685e-14■□□□□ 11
VIM-204ENST00000478746 MTERF2Q49AM1 385 aa19.33■□□□□ 0.68
VIM-204ENST00000478746 CMASQ8NFW8 434 aaPredicted RBP19.33■□□□□ 0.68
VIM-204ENST00000478746 CCDC12Q8WUD4 166 aaPredicted RBP19.33■□□□□ 0.68
VIM-204ENST00000478746 STAMQ92783 540 aa19.33■□□□□ 0.68
VIM-204ENST00000478746 NXPE3Q969Y0 559 aa19.33■□□□□ 0.68
VIM-204ENST00000478746 TCEANC2Q96MN5 208 aa19.33■□□□□ 0.68
VIM-204ENST00000478746 FAM193BQ96PV7 902 aaPredicted RBP19.33■□□□□ 0.68
VIM-204ENST00000478746 HINFPQ9BQA5 517 aa19.33■□□□□ 0.68
VIM-204ENST00000478746 WDR6Q9NNW5 1121 aaKnown RBP19.33■□□□□ 0.68
VIM-204ENST00000478746 MAN1C1Q9NR34 630 aa19.33■□□□□ 0.68
VIM-204ENST00000478746 C2CD2LO14523 706 aa19.32■□□□□ 0.68
VIM-204ENST00000478746 CHMP2AO43633 222 aa19.32■□□□□ 0.68
VIM-204ENST00000478746 GAS7O60861 476 aa19.32■□□□□ 0.68
VIM-204ENST00000478746 DDHD2O94830 711 aa19.32■□□□□ 0.68
VIM-204ENST00000478746 GNA11P29992 359 aa19.32■□□□□ 0.68
VIM-204ENST00000478746 JAK3P52333 1124 aa19.32■□□□□ 0.68
VIM-204ENST00000478746 SPECC1Q5M775 1068 aa19.32■□□□□ 0.68
VIM-204ENST00000478746 ELMSAN1Q6PJG2 1045 aa19.32■□□□□ 0.68
VIM-204ENST00000478746 ZC3H14Q6PJT7 736 aaKnown RBP19.32■□□□□ 0.68
VIM-204ENST00000478746 CYP26C1Q6V0L0 522 aa19.32■□□□□ 0.68
VIM-204ENST00000478746 DHX32Q7L7V1 743 aaKnown RBP19.32■□□□□ 0.68
VIM-204ENST00000478746 CATSPER4Q7RTX7 472 aa19.32■□□□□ 0.68
VIM-204ENST00000478746 ZNF410Q86VK4 478 aa19.32■□□□□ 0.68
VIM-204ENST00000478746 RHPN2Q8IUC4 686 aa19.32■□□□□ 0.68
VIM-204ENST00000478746 LENG9Q96B70 501 aa19.32■□□□□ 0.68
VIM-204ENST00000478746 RIT2Q99578 217 aa19.32■□□□□ 0.68
VIM-204ENST00000478746 ESYT1Q9BSJ8 1104 aa19.32■□□□□ 0.68
VIM-204ENST00000478746 NIFKQ9BYG3 293 aaKnown RBP19.32■□□□□ 0.68
VIM-204ENST00000478746 TBC1D17Q9HA65 648 aa19.32■□□□□ 0.68
VIM-204ENST00000478746 ANO2Q9NQ90 1003 aa19.32■□□□□ 0.68
VIM-204ENST00000478746 KANSL3Q9P2N6 904 aa19.32■□□□□ 0.68
VIM-204ENST00000478746 SUCLA2Q9P2R7 463 aaPredicted RBP19.32■□□□□ 0.68
VIM-204ENST00000478746 SEPT9Q9UHD8 586 aaPredicted RBP19.32■□□□□ 0.68
VIM-204ENST00000478746 DPP7Q9UHL4 492 aa19.32■□□□□ 0.68
VIM-204ENST00000478746 NAP1L2Q9ULW6 460 aaPredicted RBP19.32■□□□□ 0.68
VIM-204ENST00000478746 IGKV6-21A0A0C4DH24 114 aa19.31■□□□□ 0.68
VIM-204ENST00000478746 KLF18A0A0U1RQI7 1052 aa19.31■□□□□ 0.68
VIM-204ENST00000478746 MSH4O15457 936 aa19.31■□□□□ 0.68
VIM-204ENST00000478746 B4GALT3O60512 393 aa19.31■□□□□ 0.68
VIM-204ENST00000478746 DCNP07585 359 aaKnown RBP19.31■□□□□ 0.68
VIM-204ENST00000478746 SRFP11831 508 aa19.31■□□□□ 0.68
VIM-204ENST00000478746 ADD1P35611 737 aaKnown RBP19.31■□□□□ 0.68
VIM-204ENST00000478746 AK2P54819 239 aa19.31■□□□□ 0.68
VIM-204ENST00000478746 XKR3Q5GH77 459 aa19.31■□□□□ 0.68
VIM-204ENST00000478746 RNF20Q5VTR2 975 aa19.31■□□□□ 0.68
VIM-204ENST00000478746 TMEM175Q9BSA9 504 aa19.31■□□□□ 0.68
VIM-204ENST00000478746 TEKT3Q9BXF9 490 aa19.31■□□□□ 0.68
VIM-204ENST00000478746 UNC45AQ9H3U1 944 aa19.31■□□□□ 0.68
VIM-204ENST00000478746 EPS15L1Q9UBC2 864 aa19.31■□□□□ 0.68
VIM-204ENST00000478746 SSX2IPQ9Y2D8 614 aa19.31■□□□□ 0.68
VIM-204ENST00000478746 SIT1Q9Y3P8 196 aa19.31■□□□□ 0.68
VIM-204ENST00000478746 PCDHB2Q9Y5E7 798 aa19.31■□□□□ 0.68
VIM-204ENST00000478746 NRP1O14786 923 aa19.3■□□□□ 0.68
VIM-204ENST00000478746 INPPL1O15357 1258 aa19.3■□□□□ 0.68
VIM-204ENST00000478746 ADH1AP07327 375 aa19.3■□□□□ 0.68
VIM-204ENST00000478746 SP9P0CG40 484 aa19.3■□□□□ 0.68
VIM-204ENST00000478746 LRCH2Q5VUJ6 765 aa19.3■□□□□ 0.68
VIM-204ENST00000478746 PHLDB3Q6NSJ2 640 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms