RNA–Protein interactions for RNA: ENST00000478603.5

C9orf3-216, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-216ENST00000478603 NT5C1B-RDH14C9J2C7 533 aa25.5■■□□□ 1.67
C9orf3-216ENST00000478603 PPM1AP35813 382 aa25.5■■□□□ 1.67
C9orf3-216ENST00000478603 LAMTOR4Q0VGL1 99 aa25.5■■□□□ 1.67
C9orf3-216ENST00000478603 TRIM29Q14134 588 aa25.5■■□□□ 1.67
C9orf3-216ENST00000478603 EMC2Q15006 297 aa25.5■■□□□ 1.67
C9orf3-216ENST00000478603 PDE12Q6L8Q7 609 aaKnown RBP25.5■■□□□ 1.67
C9orf3-216ENST00000478603 OTUD6AQ7L8S5 288 aa25.5■■□□□ 1.67
C9orf3-216ENST00000478603 SLC39A11Q8N1S5 342 aa25.5■■□□□ 1.67
C9orf3-216ENST00000478603 EIF2AK1Q9BQI3 630 aaKnown RBP25.5■■□□□ 1.67
C9orf3-216ENST00000478603 TRAIPQ9BWF2 469 aa25.5■■□□□ 1.67
C9orf3-216ENST00000478603 MINDY3Q9H8M7 445 aa25.5■■□□□ 1.67
C9orf3-216ENST00000478603 PCDHA12Q9UN75 941 aa25.5■■□□□ 1.67
C9orf3-216ENST00000478603 PPME1Q9Y570 386 aa25.5■■□□□ 1.67
C9orf3-216ENST00000478603 HIDE1A8MVS5 230 aa25.49■■□□□ 1.67
C9orf3-216ENST00000478603 EIF5BO60841 1220 aaKnown RBP25.49■■□□□ 1.67
C9orf3-216ENST00000478603 SLITRK3O94933 977 aa25.49■■□□□ 1.67
C9orf3-216ENST00000478603 GUCY1B3Q02153 619 aa25.49■■□□□ 1.67
C9orf3-216ENST00000478603 KRT17Q04695 432 aa25.49■■□□□ 1.67
C9orf3-216ENST00000478603 EXOC8Q8IYI6 725 aa25.49■■□□□ 1.67
C9orf3-216ENST00000478603 MRPL9Q9BYD2 267 aaKnown RBP25.49■■□□□ 1.67
C9orf3-216ENST00000478603 AGPAT5Q9NUQ2 364 aa25.49■■□□□ 1.67
C9orf3-216ENST00000478603 DCXO43602 365 aa25.48■■□□□ 1.67
C9orf3-216ENST00000478603 NEMFO60524 1076 aa25.48■■□□□ 1.67
C9orf3-216ENST00000478603 ALADP13716 330 aa25.48■■□□□ 1.67
C9orf3-216ENST00000478603 TXKP42681 527 aa25.48■■□□□ 1.67
C9orf3-216ENST00000478603 BCAR1P56945 870 aa25.48■■□□□ 1.67
C9orf3-216ENST00000478603 TMC7Q7Z402 723 aa25.48■■□□□ 1.67
C9orf3-216ENST00000478603 POP1Q99575 1024 aaKnown RBP25.48■■□□□ 1.67
C9orf3-216ENST00000478603 CDCA3Q99618 268 aaPredicted RBP25.48■■□□□ 1.67
C9orf3-216ENST00000478603 TTC12Q9H892 705 aaPredicted RBP25.48■■□□□ 1.67
C9orf3-216ENST00000478603 INPP5FQ9Y2H2 1132 aa25.48■■□□□ 1.67
C9orf3-216ENST00000478603 USP15Q9Y4E8 981 aaPredicted RBP25.48■■□□□ 1.67
C9orf3-216ENST00000478603 ZC3H11AO75152 810 aaKnown RBP eCLIP25.47■■□□□ 1.67
C9orf3-216ENST00000478603 SKIP12755 728 aa25.47■■□□□ 1.67
C9orf3-216ENST00000478603 ATP2B1P20020 1258 aa25.47■■□□□ 1.67
C9orf3-216ENST00000478603 LLGL2Q6P1M3 1020 aa25.47■■□□□ 1.67
C9orf3-216ENST00000478603 SRGAP1Q7Z6B7 1085 aa25.47■■□□□ 1.67
C9orf3-216ENST00000478603 FERMT3Q86UX7 667 aa25.47■■□□□ 1.67
C9orf3-216ENST00000478603 CCDC83Q8IWF9 413 aa25.47■■□□□ 1.67
C9orf3-216ENST00000478603 RNF149Q8NC42 400 aa25.47■■□□□ 1.67
C9orf3-216ENST00000478603 TCP11Q8WWU5 503 aa25.47■■□□□ 1.67
C9orf3-216ENST00000478603 MTRQ99707 1265 aa25.47■■□□□ 1.67
C9orf3-216ENST00000478603 NGRNQ9NPE2 291 aaKnown RBP25.47■■□□□ 1.67
C9orf3-216ENST00000478603 XPNPEP1Q9NQW7 623 aa25.47■■□□□ 1.67
C9orf3-216ENST00000478603 ALDH7A1P49419 539 aaKnown RBP25.46■■□□□ 1.67
C9orf3-216ENST00000478603 RAB27AP51159 221 aa25.46■■□□□ 1.67
C9orf3-216ENST00000478603 GLB1LQ6UWU2 654 aa25.46■■□□□ 1.67
C9orf3-216ENST00000478603 TMEM173Q86WV6 379 aaPredicted RBP25.46■■□□□ 1.67
C9orf3-216ENST00000478603 HSD17B14Q9BPX1 270 aa25.46■■□□□ 1.67
C9orf3-216ENST00000478603 TMEM60Q9H2L4 133 aa25.46■■□□□ 1.67
C9orf3-216ENST00000478603 TBC1D13Q9NVG8 400 aa25.46■■□□□ 1.67
C9orf3-216ENST00000478603 PCDHB2Q9Y5E7 798 aa25.46■■□□□ 1.67
C9orf3-216ENST00000478603 A0A087WWV3 80 aa25.45■■□□□ 1.66
C9orf3-216ENST00000478603 GAS2O43903 313 aaKnown RBP25.45■■□□□ 1.66
C9orf3-216ENST00000478603 ZNF623O75123 536 aa25.45■■□□□ 1.66
C9orf3-216ENST00000478603 OFD1O75665 1012 aa25.45■■□□□ 1.66
C9orf3-216ENST00000478603 HOXA11P31270 313 aaPredicted RBP25.45■■□□□ 1.66
C9orf3-216ENST00000478603 KCNC3Q14003 757 aa25.45■■□□□ 1.66
C9orf3-216ENST00000478603 NOMO2Q5JPE7 1267 aa25.45■■□□□ 1.66
C9orf3-216ENST00000478603 MTMR9Q96QG7 549 aa25.45■■□□□ 1.66
C9orf3-216ENST00000478603 NRDE2Q9H7Z3 1164 aa25.45■■□□□ 1.66
C9orf3-216ENST00000478603 LIMCH1Q9UPQ0 1083 aa25.45■■□□□ 1.66
C9orf3-216ENST00000478603 POTEMA6NI47 508 aa25.44■■□□□ 1.66
C9orf3-216ENST00000478603 TECP42680 631 aa25.44■■□□□ 1.66
C9orf3-216ENST00000478603 UBXN11Q5T124 520 aa25.44■■□□□ 1.66
C9orf3-216ENST00000478603 AGMOQ6ZNB7 445 aa25.44■■□□□ 1.66
C9orf3-216ENST00000478603 RNF135Q8IUD6 432 aa25.44■■□□□ 1.66
C9orf3-216ENST00000478603 TMEM169Q96HH4 297 aa25.44■■□□□ 1.66
C9orf3-216ENST00000478603 APOL5Q9BWW9 433 aa25.44■■□□□ 1.66
C9orf3-216ENST00000478603 GBP3Q9H0R5 595 aa25.44■■□□□ 1.66
C9orf3-216ENST00000478603 MUTYHQ9UIF7 546 aa25.44■■□□□ 1.66
C9orf3-216ENST00000478603 FSD2A1L4K1 749 aa25.43■■□□□ 1.66
C9orf3-216ENST00000478603 ASAP2O43150 1006 aa25.43■■□□□ 1.66
C9orf3-216ENST00000478603 LYPLA2O95372 231 aa25.43■■□□□ 1.66
C9orf3-216ENST00000478603 MCM7P33993 719 aa25.43■■□□□ 1.66
C9orf3-216ENST00000478603 CA8P35219 290 aa25.43■■□□□ 1.66
C9orf3-216ENST00000478603 SMC1AQ14683 1233 aaKnown RBP25.43■■□□□ 1.66
C9orf3-216ENST00000478603 TMEM184AQ6ZMB5 413 aa25.43■■□□□ 1.66
C9orf3-216ENST00000478603 PGBD4Q96DM1 585 aa25.43■■□□□ 1.66
C9orf3-216ENST00000478603 DNAJB4Q9UDY4 337 aa25.43■■□□□ 1.66
C9orf3-216ENST00000478603 C2orf71A6NGG8 1288 aa25.42■■□□□ 1.66
C9orf3-216ENST00000478603 PRR33A8MZF0 331 aa25.42■■□□□ 1.66
C9orf3-216ENST00000478603 B4GALT3O60512 393 aa25.42■■□□□ 1.66
C9orf3-216ENST00000478603 AFF1P51825 1210 aaKnown RBP25.42■■□□□ 1.66
C9orf3-216ENST00000478603 RNASELQ05823 741 aaKnown RBP25.42■■□□□ 1.66
C9orf3-216ENST00000478603 ANKRD54Q6NXT1 300 aa25.42■■□□□ 1.66
C9orf3-216ENST00000478603 MRPL43Q8N983 215 aaKnown RBP25.42■■□□□ 1.66
C9orf3-216ENST00000478603 ASAP3Q8TDY4 903 aa25.42■■□□□ 1.66
C9orf3-216ENST00000478603 PIGOQ8TEQ8 1089 aa25.42■■□□□ 1.66
C9orf3-216ENST00000478603 BCL7CQ8WUZ0 217 aaPredicted RBP25.42■■□□□ 1.66
C9orf3-216ENST00000478603 C8orf76Q96K31 380 aa25.42■■□□□ 1.66
C9orf3-216ENST00000478603 ANKEF1Q9NU02 776 aa25.42■■□□□ 1.66
C9orf3-216ENST00000478603 HCN4Q9Y3Q4 1203 aa25.42■■□□□ 1.66
C9orf3-216ENST00000478603 GALTP07902 379 aa25.41■■□□□ 1.66
C9orf3-216ENST00000478603 SRGAP2BP0DMP2 458 aa25.41■■□□□ 1.66
C9orf3-216ENST00000478603 RARRES1P49788 294 aa25.41■■□□□ 1.66
C9orf3-216ENST00000478603 PTENP60484 403 aa25.41■■□□□ 1.66
C9orf3-216ENST00000478603 MXD4Q14582 209 aaPredicted RBP25.41■■□□□ 1.66
C9orf3-216ENST00000478603 SAFBQ15424 915 aaKnown RBP eCLIP25.41■■□□□ 1.66
C9orf3-216ENST00000478603 SYCE2Q6PIF2 218 aa25.41■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms