RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 UBE2QL1A1L167 161 aa5.6□□□□□ -1.51
CDC42BPA-212ENST00000478573 PTPDC1A2A3K4 754 aa5.6□□□□□ -1.51
CDC42BPA-212ENST00000478573 OPA1O60313 960 aa5.6□□□□□ -1.51
CDC42BPA-212ENST00000478573 ARHGAP44Q17R89 818 aa5.6□□□□□ -1.51
CDC42BPA-212ENST00000478573 TTC38Q5R3I4 469 aa5.6□□□□□ -1.51
CDC42BPA-212ENST00000478573 ZCCHC8Q6NZY4 707 aaKnown RBP5.6□□□□□ -1.51
CDC42BPA-212ENST00000478573 FAM111BQ6SJ93 734 aa5.6□□□□□ -1.51
CDC42BPA-212ENST00000478573 ZNF627Q7L945 461 aa5.6□□□□□ -1.51
CDC42BPA-212ENST00000478573 LDLRAD3Q86YD5 345 aa5.6□□□□□ -1.51
CDC42BPA-212ENST00000478573 AHI1Q8N157 1196 aa5.6□□□□□ -1.51
CDC42BPA-212ENST00000478573 AFAP1L2Q8N4X5 818 aa5.6□□□□□ -1.51
CDC42BPA-212ENST00000478573 PGBD4Q96DM1 585 aa5.6□□□□□ -1.51
CDC42BPA-212ENST00000478573 DYDC2Q96IM9 177 aa5.6□□□□□ -1.51
CDC42BPA-212ENST00000478573 MAML3Q96JK9 1138 aa5.6□□□□□ -1.51
CDC42BPA-212ENST00000478573 TCF25Q9BQ70 676 aa5.6□□□□□ -1.51
CDC42BPA-212ENST00000478573 ORAI3Q9BRQ5 295 aa5.6□□□□□ -1.51
CDC42BPA-212ENST00000478573 CABP5Q9NP86 173 aa5.6□□□□□ -1.51
CDC42BPA-212ENST00000478573 TYW1Q9NV66 732 aaKnown RBP5.6□□□□□ -1.51
CDC42BPA-212ENST00000478573 DNAI1Q9UI46 699 aa5.6□□□□□ -1.51
CDC42BPA-212ENST00000478573 ATP8A1Q9Y2Q0 1164 aa5.6□□□□□ -1.51
CDC42BPA-212ENST00000478573 PRDM2Q13029 1718 aa5.6□□□□□ -1.51
CDC42BPA-212ENST00000478573 H7C1D1 291 aa5.59□□□□□ -1.51
CDC42BPA-212ENST00000478573 DVL2O14641 736 aa5.59□□□□□ -1.51
CDC42BPA-212ENST00000478573 FLT3P36888 993 aa5.59□□□□□ -1.51
CDC42BPA-212ENST00000478573 MAN2A2P49641 1150 aa5.59□□□□□ -1.51
CDC42BPA-212ENST00000478573 MECP2P51608 486 aaKnown RBP5.59□□□□□ -1.51
CDC42BPA-212ENST00000478573 ZNF460Q14592 562 aa5.59□□□□□ -1.51
CDC42BPA-212ENST00000478573 ZNF174Q15697 407 aa5.59□□□□□ -1.51
CDC42BPA-212ENST00000478573 MB21D1Q8N884 522 aa5.59□□□□□ -1.51
CDC42BPA-212ENST00000478573 ARL8AQ96BM9 186 aa5.59□□□□□ -1.51
CDC42BPA-212ENST00000478573 WDR92Q96MX6 357 aa5.59□□□□□ -1.51
CDC42BPA-212ENST00000478573 GPR87Q9BY21 358 aa5.59□□□□□ -1.51
CDC42BPA-212ENST00000478573 IL23AQ9NPF7 189 aa5.59□□□□□ -1.51
CDC42BPA-212ENST00000478573 ACSS2Q9NR19 701 aa5.59□□□□□ -1.51
CDC42BPA-212ENST00000478573 POLR3BQ9NW08 1133 aaPredicted RBP5.59□□□□□ -1.51
CDC42BPA-212ENST00000478573 RAMP2O60895 175 aa5.58□□□□□ -1.52
CDC42BPA-212ENST00000478573 FAM20BO75063 409 aa5.58□□□□□ -1.52
CDC42BPA-212ENST00000478573 TOX4O94842 621 aa5.58□□□□□ -1.52
CDC42BPA-212ENST00000478573 APOL3O95236 402 aa5.58□□□□□ -1.52
CDC42BPA-212ENST00000478573 CNGA1P29973 690 aa5.58□□□□□ -1.52
CDC42BPA-212ENST00000478573 FSTL1Q12841 308 aa5.58□□□□□ -1.52
CDC42BPA-212ENST00000478573 CT47A1Q5JQC4 288 aaPredicted RBP5.58□□□□□ -1.52
CDC42BPA-212ENST00000478573 PIK3R6Q5UE93 754 aa5.58□□□□□ -1.52
CDC42BPA-212ENST00000478573 CNNM4Q6P4Q7 775 aa5.58□□□□□ -1.52
CDC42BPA-212ENST00000478573 MRGPRGQ86SM5 289 aa5.58□□□□□ -1.52
CDC42BPA-212ENST00000478573 KIAA1958Q8N8K9 716 aa5.58□□□□□ -1.52
CDC42BPA-212ENST00000478573 RPGRQ92834 1020 aaKnown RBP5.58□□□□□ -1.52
CDC42BPA-212ENST00000478573 TTPALQ9BTX7 342 aa5.58□□□□□ -1.52
CDC42BPA-212ENST00000478573 MTFR1LQ9H019 292 aa5.58□□□□□ -1.52
CDC42BPA-212ENST00000478573 KCMF1Q9P0J7 381 aa5.58□□□□□ -1.52
CDC42BPA-212ENST00000478573 PTX3P26022 381 aaPredicted RBP5.57□□□□□ -1.52
CDC42BPA-212ENST00000478573 ADAM8P78325 824 aa5.57□□□□□ -1.52
CDC42BPA-212ENST00000478573 SLC25A3Q00325 362 aa5.57□□□□□ -1.52
CDC42BPA-212ENST00000478573 PURAQ00577 322 aaKnown RBP5.57□□□□□ -1.52
CDC42BPA-212ENST00000478573 DHCR24Q15392 516 aa5.57□□□□□ -1.52
CDC42BPA-212ENST00000478573 FKBP15Q5T1M5 1219 aa5.57□□□□□ -1.52
CDC42BPA-212ENST00000478573 UBE2R2Q712K3 238 aaPredicted RBP5.57□□□□□ -1.52
CDC42BPA-212ENST00000478573 KIF18BQ86Y91 864 aa5.57□□□□□ -1.52
CDC42BPA-212ENST00000478573 ELOA2Q8IYF1 753 aaPredicted RBP5.57□□□□□ -1.52
CDC42BPA-212ENST00000478573 PLA2G15Q8NCC3 412 aa5.57□□□□□ -1.52
CDC42BPA-212ENST00000478573 ATXN2LQ8WWM7 1075 aaKnown RBP5.57□□□□□ -1.52
CDC42BPA-212ENST00000478573 NKD2Q969F2 451 aaPredicted RBP5.57□□□□□ -1.52
CDC42BPA-212ENST00000478573 FAM126AQ9BYI3 521 aaPredicted RBP5.57□□□□□ -1.52
CDC42BPA-212ENST00000478573 NRDE2Q9H7Z3 1164 aa5.57□□□□□ -1.52
CDC42BPA-212ENST00000478573 MCM8Q9UJA3 840 aa5.57□□□□□ -1.52
CDC42BPA-212ENST00000478573 DAPK3O43293 454 aa5.56□□□□□ -1.52
CDC42BPA-212ENST00000478573 RAB11FIP3O75154 756 aa5.56□□□□□ -1.52
CDC42BPA-212ENST00000478573 EYA4O95677 639 aa5.56□□□□□ -1.52
CDC42BPA-212ENST00000478573 CYP17A1P05093 508 aa5.56□□□□□ -1.52
CDC42BPA-212ENST00000478573 JMJD7P0C870 316 aa5.56□□□□□ -1.52
CDC42BPA-212ENST00000478573 VSIG10L2P0DP72 767 aa5.56□□□□□ -1.52
CDC42BPA-212ENST00000478573 HNRNPLP14866 589 aaKnown RBP eCLIP5.56□□□□□ -1.52
CDC42BPA-212ENST00000478573 CDK11BP21127 795 aaKnown RBP5.56□□□□□ -1.52
CDC42BPA-212ENST00000478573 NANOS3P60323 173 aaKnown RBP5.56□□□□□ -1.52
CDC42BPA-212ENST00000478573 SMAD3P84022 425 aaKnown RBP5.56□□□□□ -1.52
CDC42BPA-212ENST00000478573 CFAP100Q494V2 611 aa5.56□□□□□ -1.52
CDC42BPA-212ENST00000478573 GAGE13Q4V321 117 aa5.56□□□□□ -1.52
CDC42BPA-212ENST00000478573 CDCA2Q69YH5 1023 aaPredicted RBP5.56□□□□□ -1.52
CDC42BPA-212ENST00000478573 DDX46Q7L014 1031 aaKnown RBP5.56□□□□□ -1.52
CDC42BPA-212ENST00000478573 CLEC14AQ86T13 490 aa5.56□□□□□ -1.52
CDC42BPA-212ENST00000478573 DDX42Q86XP3 938 aaKnown RBP eCLIP5.56□□□□□ -1.52
CDC42BPA-212ENST00000478573 UBR7Q8N806 425 aa5.56□□□□□ -1.52
CDC42BPA-212ENST00000478573 PRPF38AQ8NAV1 312 aaKnown RBP5.56□□□□□ -1.52
CDC42BPA-212ENST00000478573 STAG1Q8WVM7 1258 aa5.56□□□□□ -1.52
CDC42BPA-212ENST00000478573 ZG16BQ96DA0 208 aa5.56□□□□□ -1.52
CDC42BPA-212ENST00000478573 DDX56Q9NY93 547 aaKnown RBP5.56□□□□□ -1.52
CDC42BPA-212ENST00000478573 DMRT1Q9Y5R6 373 aa5.56□□□□□ -1.52
CDC42BPA-212ENST00000478573 NCAPD3P42695 1498 aa5.56□□□□□ -1.52
CDC42BPA-212ENST00000478573 TRAF5O00463 557 aa5.55□□□□□ -1.52
CDC42BPA-212ENST00000478573 CPEP16870 476 aa5.55□□□□□ -1.52
CDC42BPA-212ENST00000478573 SLC9A1P19634 815 aa5.55□□□□□ -1.52
CDC42BPA-212ENST00000478573 CDKN1CP49918 316 aaPredicted RBP5.55□□□□□ -1.52
CDC42BPA-212ENST00000478573 NEK4P51957 841 aa5.55□□□□□ -1.52
CDC42BPA-212ENST00000478573 BCAR1P56945 870 aa5.55□□□□□ -1.52
CDC42BPA-212ENST00000478573 TOB2Q14106 344 aaPredicted RBP5.55□□□□□ -1.52
CDC42BPA-212ENST00000478573 MYBPC3Q14896 1274 aa5.55□□□□□ -1.52
CDC42BPA-212ENST00000478573 PCBP1Q15365 356 aaKnown RBP eCLIP5.55□□□□□ -1.52
CDC42BPA-212ENST00000478573 SEPT7Q16181 437 aaKnown RBP5.55□□□□□ -1.52
CDC42BPA-212ENST00000478573 BMP8AQ7Z5Y6 402 aa5.55□□□□□ -1.52
CDC42BPA-212ENST00000478573 DNAJC10Q8IXB1 793 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms