RNA–Protein interactions for RNA: ENST00000478279.5

APTX-222, Transcript of aprataxin, human

TSL 1 (best)

Gene APTX, Length 684 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-222	ENST00000478279	WDR6	Q9NNW5	1121 aa	Known RBP	11.97	□□□□□ -0.49
APTX-222	ENST00000478279	NRBP2	Q9NSY0	501 aa		11.97	□□□□□ -0.49
APTX-222	ENST00000478279	DLGAP2	Q9P1A6	1054 aa		11.97	□□□□□ -0.49
APTX-222	ENST00000478279	EPS15L1	Q9UBC2	864 aa		11.97	□□□□□ -0.49
APTX-222	ENST00000478279	TCEAL9	Q9UHQ7	104 aa		11.97	□□□□□ -0.49
APTX-222	ENST00000478279	RBM8A	Q9Y5S9	174 aa	Known RBP	11.97	□□□□□ -0.49
APTX-222	ENST00000478279	DOCK8	Q8NF50	2099 aa		11.97	□□□□□ -0.49
APTX-222	ENST00000478279	MAP1B	P46821	2468 aa	Known RBP	11.97	□□□□□ -0.49
APTX-222	ENST00000478279	CNTNAP5	Q8WYK1	1306 aa		11.96	□□□□□ -0.49
APTX-222	ENST00000478279	hCG_1984214	I3L0E3	225 aa		11.96	□□□□□ -0.49
APTX-222	ENST00000478279	CSDE1	O75534	798 aa	Known RBP	11.96	□□□□□ -0.49
APTX-222	ENST00000478279	OFD1	O75665	1012 aa		11.96	□□□□□ -0.49
APTX-222	ENST00000478279	DCN	P07585	359 aa	Known RBP	11.96	□□□□□ -0.49
APTX-222	ENST00000478279	CDC42EP1	Q00587	391 aa		11.96	□□□□□ -0.49
APTX-222	ENST00000478279	COL9A3	Q14050	684 aa	Predicted RBP	11.96	□□□□□ -0.49
APTX-222	ENST00000478279	RSPO4	Q2I0M5	234 aa	Predicted RBP	11.96	□□□□□ -0.49
APTX-222	ENST00000478279	TTC22	Q5TAA0	569 aa		11.96	□□□□□ -0.49
APTX-222	ENST00000478279	MICU3	Q86XE3	530 aa		11.96	□□□□□ -0.49
APTX-222	ENST00000478279	ZNF713	Q8N859	430 aa	Predicted RBP	11.96	□□□□□ -0.49
APTX-222	ENST00000478279	SUMF1	Q8NBK3	374 aa		11.96	□□□□□ -0.49
APTX-222	ENST00000478279	CRYGN	Q8WXF5	182 aa		11.96	□□□□□ -0.49
APTX-222	ENST00000478279	GCOM2	Q9BZD3	368 aa	Predicted RBP	11.96	□□□□□ -0.49
APTX-222	ENST00000478279	GBP3	Q9H0R5	595 aa		11.96	□□□□□ -0.49
APTX-222	ENST00000478279	BARHL2	Q9NY43	387 aa		11.96	□□□□□ -0.49
APTX-222	ENST00000478279	DNAJB4	Q9UDY4	337 aa		11.96	□□□□□ -0.49
APTX-222	ENST00000478279	INPP5F	Q9Y2H2	1132 aa		11.96	□□□□□ -0.49
APTX-222	ENST00000478279	SIT1	Q9Y3P8	196 aa		11.96	□□□□□ -0.49
APTX-222	ENST00000478279	CLUH	O75153	1309 aa		11.95	□□□□□ -0.5
APTX-222	ENST00000478279	CCDC195	A0A1B0GUA6	201 aa		11.95	□□□□□ -0.5
APTX-222	ENST00000478279	ZNF862	O60290	1169 aa		11.95	□□□□□ -0.5
APTX-222	ENST00000478279	ZNF623	O75123	536 aa		11.95	□□□□□ -0.5
APTX-222	ENST00000478279	OAT	P04181	439 aa		11.95	□□□□□ -0.5
APTX-222	ENST00000478279	SSB	P05455	408 aa	Known RBP eCLIP	11.95	□□□□□ -0.5
APTX-222	ENST00000478279	SET	Q01105	290 aa	Predicted RBP	11.95	□□□□□ -0.5
APTX-222	ENST00000478279	LONRF3	Q496Y0	759 aa		11.95	□□□□□ -0.5
APTX-222	ENST00000478279	JAKMIP3	Q5VZ66	844 aa		11.95	□□□□□ -0.5
APTX-222	ENST00000478279	TWF2	Q6IBS0	349 aa	Known RBP	11.95	□□□□□ -0.5
APTX-222	ENST00000478279	SYNE3	Q6ZMZ3	975 aa		11.95	□□□□□ -0.5
APTX-222	ENST00000478279	SGMS1	Q86VZ5	419 aa		11.95	□□□□□ -0.5
APTX-222	ENST00000478279	ZNF280B	Q86YH2	543 aa		11.95	□□□□□ -0.5
APTX-222	ENST00000478279	GPR152	Q8TDT2	470 aa		11.95	□□□□□ -0.5
APTX-222	ENST00000478279	MYADM	Q96S97	322 aa		11.95	□□□□□ -0.5
APTX-222	ENST00000478279	LRRC2	Q9BYS8	371 aa		11.95	□□□□□ -0.5
APTX-222	ENST00000478279	MAN1C1	Q9NR34	630 aa		11.95	□□□□□ -0.5
APTX-222	ENST00000478279	ARHGEF3	Q9NR81	526 aa		11.95	□□□□□ -0.5
APTX-222	ENST00000478279	MRPL17	Q9NRX2	175 aa	Known RBP	11.95	□□□□□ -0.5
APTX-222	ENST00000478279	RBM28	Q9NW13	759 aa	Known RBP	11.95	□□□□□ -0.5
APTX-222	ENST00000478279	DPP7	Q9UHL4	492 aa		11.95	□□□□□ -0.5
APTX-222	ENST00000478279	SAMM50	Q9Y512	469 aa		11.95	□□□□□ -0.5
APTX-222	ENST00000478279		V9GY48	417 aa	Predicted RBP	11.95	□□□□□ -0.5
APTX-222	ENST00000478279	MEIS3P2	A8K0S8	358 aa		11.94	□□□□□ -0.5
APTX-222	ENST00000478279	WDR64	B1ANS9	1081 aa		11.94	□□□□□ -0.5
APTX-222	ENST00000478279	B4GALT3	O60512	393 aa		11.94	□□□□□ -0.5
APTX-222	ENST00000478279	KIN	O60870	393 aa	Known RBP	11.94	□□□□□ -0.5
APTX-222	ENST00000478279	ALDH2	P05091	517 aa		11.94	□□□□□ -0.5
APTX-222	ENST00000478279	SDHB	P21912	280 aa		11.94	□□□□□ -0.5
APTX-222	ENST00000478279	SFPQ	P23246	707 aa	Known RBP eCLIP	11.94	□□□□□ -0.5
APTX-222	ENST00000478279	RAB27A	P51159	221 aa		11.94	□□□□□ -0.5
APTX-222	ENST00000478279	PRKCE	Q02156	737 aa		11.94	□□□□□ -0.5
APTX-222	ENST00000478279	FUT2	Q10981	343 aa		11.94	□□□□□ -0.5
APTX-222	ENST00000478279	DRP2	Q13474	957 aa		11.94	□□□□□ -0.5
APTX-222	ENST00000478279	ELMSAN1	Q6PJG2	1045 aa		11.94	□□□□□ -0.5
APTX-222	ENST00000478279	URGCP	Q8TCY9	931 aa		11.94	□□□□□ -0.5
APTX-222	ENST00000478279	PGBD4	Q96DM1	585 aa		11.94	□□□□□ -0.5
APTX-222	ENST00000478279	BORCS6	Q96GS4	357 aa		11.94	□□□□□ -0.5
APTX-222	ENST00000478279	TMEM175	Q9BSA9	504 aa		11.94	□□□□□ -0.5
APTX-222	ENST00000478279	INO80B	Q9C086	356 aa	Predicted RBP	11.94	□□□□□ -0.5
APTX-222	ENST00000478279	FAM105A	Q9NUU6	356 aa		11.94	□□□□□ -0.5
APTX-222	ENST00000478279	PIN4	Q9Y237	131 aa	Known RBP	11.94	□□□□□ -0.5
APTX-222	ENST00000478279	SSX2IP	Q9Y2D8	614 aa		11.94	□□□□□ -0.5
APTX-222	ENST00000478279	FAN1	Q9Y2M0	1017 aa		11.94	□□□□□ -0.5
APTX-222	ENST00000478279	CFAP47	Q6ZTR5	3102 aa		11.94	□□□□□ -0.5
APTX-222	ENST00000478279		A0A087WZ62	844 aa		11.93	□□□□□ -0.5
APTX-222	ENST00000478279	POTEM	A6NI47	508 aa		11.93	□□□□□ -0.5
APTX-222	ENST00000478279	INPPL1	O15357	1258 aa		11.93	□□□□□ -0.5
APTX-222	ENST00000478279	DDHD2	O94830	711 aa		11.93	□□□□□ -0.5
APTX-222	ENST00000478279	SOD2	P04179	222 aa		11.93	□□□□□ -0.5
APTX-222	ENST00000478279	UROD	P06132	367 aa		11.93	□□□□□ -0.5
APTX-222	ENST00000478279	ADH1A	P07327	375 aa		11.93	□□□□□ -0.5
APTX-222	ENST00000478279	LAMP2	P13473	410 aa		11.93	□□□□□ -0.5
APTX-222	ENST00000478279	GLUL	P15104	373 aa		11.93	□□□□□ -0.5
APTX-222	ENST00000478279	AK2	P54819	239 aa		11.93	□□□□□ -0.5
APTX-222	ENST00000478279	TARBP2	Q15633	366 aa	Known RBP	11.93	□□□□□ -0.5
APTX-222	ENST00000478279	DCLRE1A	Q6PJP8	1040 aa		11.93	□□□□□ -0.5
APTX-222	ENST00000478279	POTEG	Q6S5H5	508 aa		11.93	□□□□□ -0.5
APTX-222	ENST00000478279	MAML2	Q8IZL2	1156 aa	Predicted RBP	11.93	□□□□□ -0.5
APTX-222	ENST00000478279	PJA1	Q8NG27	643 aa		11.93	□□□□□ -0.5
APTX-222	ENST00000478279	HDAC7	Q8WUI4	952 aa		11.93	□□□□□ -0.5
APTX-222	ENST00000478279	SMG7	Q92540	1137 aa	Known RBP	11.93	□□□□□ -0.5
APTX-222	ENST00000478279	RPS6KC1	Q96S38	1066 aa		11.93	□□□□□ -0.5
APTX-222	ENST00000478279	FDXACB1	Q9BRP7	624 aa	Predicted RBP	11.93	□□□□□ -0.5
APTX-222	ENST00000478279	SLC2A4RG	Q9NR83	387 aa		11.93	□□□□□ -0.5
APTX-222	ENST00000478279	DISC1	Q9NRI5	854 aa		11.93	□□□□□ -0.5
APTX-222	ENST00000478279	FAM120A	Q9NZB2	1118 aa	Known RBP eCLIP	11.93	□□□□□ -0.5
APTX-222	ENST00000478279	ANHX	E9PGG2	379 aa		11.92	□□□□□ -0.5
APTX-222	ENST00000478279	C2CD2L	O14523	706 aa		11.92	□□□□□ -0.5
APTX-222	ENST00000478279	NRP1	O14786	923 aa		11.92	□□□□□ -0.5
APTX-222	ENST00000478279	SLC27A2	O14975	620 aa		11.92	□□□□□ -0.5
APTX-222	ENST00000478279	TEX28	O15482	410 aa		11.92	□□□□□ -0.5
APTX-222	ENST00000478279	RFPL2	O75678	378 aa		11.92	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms