RNA–Protein interactions for RNA: ENST00000477836.1

SMARCB1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2

Gene SMARCB1, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-206ENST00000477836 METTL13Q8N6R0 699 aa11.04□□□□□ -0.64
SMARCB1-206ENST00000477836 FGF14Q92915 247 aa11.04□□□□□ -0.64
SMARCB1-206ENST00000477836 EVI5LQ96CN4 794 aa11.04□□□□□ -0.64
SMARCB1-206ENST00000477836 BACH2Q9BYV9 841 aa11.04□□□□□ -0.64
SMARCB1-206ENST00000477836 RHOBTB2Q9BYZ6 727 aa11.04□□□□□ -0.64
SMARCB1-206ENST00000477836 GBP3Q9H0R5 595 aa11.04□□□□□ -0.64
SMARCB1-206ENST00000477836 JADE2Q9NQC1 790 aa11.04□□□□□ -0.64
SMARCB1-206ENST00000477836 MRPL17Q9NRX2 175 aaKnown RBP11.04□□□□□ -0.64
SMARCB1-206ENST00000477836 UBIAD1Q9Y5Z9 338 aa11.04□□□□□ -0.64
SMARCB1-206ENST00000477836 LAMA5O15230 3695 aa11.04□□□□□ -0.64
SMARCB1-206ENST00000477836 CARNS1A5YM72 827 aa11.03□□□□□ -0.64
SMARCB1-206ENST00000477836 PIK3CDO00329 1044 aa11.03□□□□□ -0.64
SMARCB1-206ENST00000477836 NCAM2O15394 837 aa11.03□□□□□ -0.64
SMARCB1-206ENST00000477836 LILRB3O75022 631 aa11.03□□□□□ -0.64
SMARCB1-206ENST00000477836 SPATA31D3P0C874 917 aa11.03□□□□□ -0.64
SMARCB1-206ENST00000477836 SLC11A1P49279 550 aa11.03□□□□□ -0.64
SMARCB1-206ENST00000477836 SLC26A2P50443 739 aa11.03□□□□□ -0.64
SMARCB1-206ENST00000477836 NRLP54845 237 aa11.03□□□□□ -0.64
SMARCB1-206ENST00000477836 RNASELQ05823 741 aaKnown RBP11.03□□□□□ -0.64
SMARCB1-206ENST00000477836 MTAPQ13126 283 aa11.03□□□□□ -0.64
SMARCB1-206ENST00000477836 LONRF3Q496Y0 759 aa11.03□□□□□ -0.64
SMARCB1-206ENST00000477836 PARM1Q6UWI2 310 aa11.03□□□□□ -0.64
SMARCB1-206ENST00000477836 SPATA31D4Q6ZUB0 917 aa11.03□□□□□ -0.64
SMARCB1-206ENST00000477836 PHKBQ93100 1093 aa11.03□□□□□ -0.64
SMARCB1-206ENST00000477836 CLDN23Q96B33 292 aa11.03□□□□□ -0.64
SMARCB1-206ENST00000477836 ZNF707Q96C28 371 aaPredicted RBP11.03□□□□□ -0.64
SMARCB1-206ENST00000477836 SDF4Q9BRK5 362 aa11.03□□□□□ -0.64
SMARCB1-206ENST00000477836 TBC1D13Q9NVG8 400 aa11.03□□□□□ -0.64
SMARCB1-206ENST00000477836 DNAJB4Q9UDY4 337 aa11.03□□□□□ -0.64
SMARCB1-206ENST00000477836 DPP7Q9UHL4 492 aa11.03□□□□□ -0.64
SMARCB1-206ENST00000477836 COL1A2P08123 1366 aa11.03□□□□□ -0.64
SMARCB1-206ENST00000477836 RALGAPA1Q6GYQ0 2036 aa11.02□□□□□ -0.64
SMARCB1-206ENST00000477836 CNOT1A5YKK6 2376 aaKnown RBP11.02□□□□□ -0.65
SMARCB1-206ENST00000477836 BACH1O14867 736 aa11.02□□□□□ -0.65
SMARCB1-206ENST00000477836 MAFGO15525 162 aa11.02□□□□□ -0.65
SMARCB1-206ENST00000477836 EIF5BO60841 1220 aaKnown RBP11.02□□□□□ -0.65
SMARCB1-206ENST00000477836 GLUD1P00367 558 aa11.02□□□□□ -0.65
SMARCB1-206ENST00000477836 ADH1AP07327 375 aa11.02□□□□□ -0.65
SMARCB1-206ENST00000477836 FGFR4P22455 802 aa11.02□□□□□ -0.65
SMARCB1-206ENST00000477836 TARSP26639 723 aaKnown RBP11.02□□□□□ -0.65
SMARCB1-206ENST00000477836 RPS9P46781 194 aaKnown RBP11.02□□□□□ -0.65
SMARCB1-206ENST00000477836 AK2P54819 239 aa11.02□□□□□ -0.65
SMARCB1-206ENST00000477836 NLRP11P59045 1033 aaKnown RBP11.02□□□□□ -0.65
SMARCB1-206ENST00000477836 RING1Q06587 406 aa11.02□□□□□ -0.65
SMARCB1-206ENST00000477836 NMIQ13287 307 aaPredicted RBP11.02□□□□□ -0.65
SMARCB1-206ENST00000477836 GRM4Q14833 912 aa11.02□□□□□ -0.65
SMARCB1-206ENST00000477836 AASDHQ4L235 1098 aaPredicted RBP11.02□□□□□ -0.65
SMARCB1-206ENST00000477836 ZNF484Q5JVG2 852 aa11.02□□□□□ -0.65
SMARCB1-206ENST00000477836 RSPO2Q6UXX9 243 aaPredicted RBP11.02□□□□□ -0.65
SMARCB1-206ENST00000477836 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.02□□□□□ -0.65
SMARCB1-206ENST00000477836 KDF1Q8NAX2 398 aaPredicted RBP11.02□□□□□ -0.65
SMARCB1-206ENST00000477836 LPPQ93052 612 aa11.02□□□□□ -0.65
SMARCB1-206ENST00000477836 ZNF668Q96K58 619 aaPredicted RBP11.02□□□□□ -0.65
SMARCB1-206ENST00000477836 UPF2Q9HAU5 1272 aaKnown RBP11.02□□□□□ -0.65
SMARCB1-206ENST00000477836 DIAPH3Q9NSV4 1193 aa11.02□□□□□ -0.65
SMARCB1-206ENST00000477836 FAM217BQ9NTX9 383 aaPredicted RBP11.02□□□□□ -0.65
SMARCB1-206ENST00000477836 STK39Q9UEW8 545 aa11.02□□□□□ -0.65
SMARCB1-206ENST00000477836 LHX6Q9UPM6 363 aa11.02□□□□□ -0.65
SMARCB1-206ENST00000477836 AKT3Q9Y243 479 aa11.02□□□□□ -0.65
SMARCB1-206ENST00000477836 INPP5FQ9Y2H2 1132 aa11.02□□□□□ -0.65
SMARCB1-206ENST00000477836 ITPR1Q14643 2758 aa11.02□□□□□ -0.65
SMARCB1-206ENST00000477836 ZBTB42B2RXF5 422 aa11.01□□□□□ -0.65
SMARCB1-206ENST00000477836 TEX28O15482 410 aa11.01□□□□□ -0.65
SMARCB1-206ENST00000477836 FOXD2O60548 495 aaPredicted RBP11.01□□□□□ -0.65
SMARCB1-206ENST00000477836 ZIC2O95409 532 aaPredicted RBP11.01□□□□□ -0.65
SMARCB1-206ENST00000477836 C22orf31O95567 290 aa11.01□□□□□ -0.65
SMARCB1-206ENST00000477836 URODP06132 367 aa11.01□□□□□ -0.65
SMARCB1-206ENST00000477836 TDGF1P13385 188 aa11.01□□□□□ -0.65
SMARCB1-206ENST00000477836 EIF4BP23588 611 aaKnown RBP11.01□□□□□ -0.65
SMARCB1-206ENST00000477836 CLCN3P51790 818 aa11.01□□□□□ -0.65
SMARCB1-206ENST00000477836 PFKPQ01813 784 aa11.01□□□□□ -0.65
SMARCB1-206ENST00000477836 SIM2Q14190 667 aaPredicted RBP11.01□□□□□ -0.65
SMARCB1-206ENST00000477836 SEC23AQ15436 765 aa11.01□□□□□ -0.65
SMARCB1-206ENST00000477836 TPRG1Q6ZUI0 275 aa11.01□□□□□ -0.65
SMARCB1-206ENST00000477836 TRMT1LQ7Z2T5 733 aaKnown RBP11.01□□□□□ -0.65
SMARCB1-206ENST00000477836 RPS6KC1Q96S38 1066 aa11.01□□□□□ -0.65
SMARCB1-206ENST00000477836 NELL2Q99435 816 aa11.01□□□□□ -0.65
SMARCB1-206ENST00000477836 KRT23Q9C075 422 aa11.01□□□□□ -0.65
SMARCB1-206ENST00000477836 NT5C3AQ9H0P0 336 aa11.01□□□□□ -0.65
SMARCB1-206ENST00000477836 KCNH7Q9NS40 1196 aa11.01□□□□□ -0.65
SMARCB1-206ENST00000477836 DACT1Q9NYF0 836 aa11.01□□□□□ -0.65
SMARCB1-206ENST00000477836 ZFP37Q9Y6Q3 630 aaPredicted RBP11.01□□□□□ -0.65
SMARCB1-206ENST00000477836 AKAP13Q12802 2813 aa11.01□□□□□ -0.65
SMARCB1-206ENST00000477836 ASH1LQ9NR48 2969 aaKnown RBP11.01□□□□□ -0.65
SMARCB1-206ENST00000477836 FREM2Q5SZK8 3169 aa11□□□□□ -0.65
SMARCB1-206ENST00000477836 SRRM3A6NNA2 597 aaPredicted RBP11□□□□□ -0.65
SMARCB1-206ENST00000477836 HIP1O00291 1037 aa11□□□□□ -0.65
SMARCB1-206ENST00000477836 TM4SF5O14894 197 aa11□□□□□ -0.65
SMARCB1-206ENST00000477836 ATG7O95352 703 aa11□□□□□ -0.65
SMARCB1-206ENST00000477836 NCLP19338 710 aaKnown RBP11□□□□□ -0.65
SMARCB1-206ENST00000477836 FSHRP23945 695 aa11□□□□□ -0.65
SMARCB1-206ENST00000477836 PHKA2P46019 1235 aa11□□□□□ -0.65
SMARCB1-206ENST00000477836 PPP2R5DQ14738 602 aa11□□□□□ -0.65
SMARCB1-206ENST00000477836 NOMO2Q5JPE7 1267 aa11□□□□□ -0.65
SMARCB1-206ENST00000477836 FAM160B1Q5W0V3 765 aa11□□□□□ -0.65
SMARCB1-206ENST00000477836 PDXDC2PQ6P474 469 aa11□□□□□ -0.65
SMARCB1-206ENST00000477836 GLB1LQ6UWU2 654 aa11□□□□□ -0.65
SMARCB1-206ENST00000477836 PALB2Q86YC2 1186 aa11□□□□□ -0.65
SMARCB1-206ENST00000477836 ZNF280BQ86YH2 543 aa11□□□□□ -0.65
SMARCB1-206ENST00000477836 CCDC60Q8IWA6 550 aaPredicted RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms