RNA–Protein interactions for RNA: ENST00000477676.6

CKS1B-207, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-207ENST00000477676 MAP4K4O95819 1239 aaPredicted RBP5.61□□□□□ -1.51
CKS1B-207ENST00000477676 GUCY1A2P33402 732 aa5.61□□□□□ -1.51
CKS1B-207ENST00000477676 RARSP54136 660 aaKnown RBP5.61□□□□□ -1.51
CKS1B-207ENST00000477676 IRX3P78415 501 aaPredicted RBP5.61□□□□□ -1.51
CKS1B-207ENST00000477676 KRTAP1-1Q07627 177 aa5.61□□□□□ -1.51
CKS1B-207ENST00000477676 MVPQ14764 893 aaKnown RBP5.61□□□□□ -1.51
CKS1B-207ENST00000477676 C9orf50Q5SZB4 431 aa5.61□□□□□ -1.51
CKS1B-207ENST00000477676 OLFML2BQ68BL8 750 aa5.61□□□□□ -1.51
CKS1B-207ENST00000477676 RELL1Q8IUW5 271 aa5.61□□□□□ -1.51
CKS1B-207ENST00000477676 SIRT2Q8IXJ6 389 aa5.61□□□□□ -1.51
CKS1B-207ENST00000477676 DTWD2Q8NBA8 298 aa5.61□□□□□ -1.51
CKS1B-207ENST00000477676 GPRC5AQ8NFJ5 357 aa5.61□□□□□ -1.51
CKS1B-207ENST00000477676 DNAJB8Q8NHS0 232 aa5.61□□□□□ -1.51
CKS1B-207ENST00000477676 NPLOC4Q8TAT6 608 aa5.61□□□□□ -1.51
CKS1B-207ENST00000477676 ACER1Q8TDN7 264 aa5.61□□□□□ -1.51
CKS1B-207ENST00000477676 TGFBRAP1Q8WUH2 860 aa5.61□□□□□ -1.51
CKS1B-207ENST00000477676 ACSF2Q96CM8 615 aaPredicted RBP5.61□□□□□ -1.51
CKS1B-207ENST00000477676 CCDC74BQ96LY2 380 aa5.61□□□□□ -1.51
CKS1B-207ENST00000477676 FAM161BQ96MY7 647 aa5.61□□□□□ -1.51
CKS1B-207ENST00000477676 NEUROD6Q96NK8 337 aa5.61□□□□□ -1.51
CKS1B-207ENST00000477676 DUSP9Q99956 384 aaKnown RBP5.61□□□□□ -1.51
CKS1B-207ENST00000477676 PAGR1Q9BTK6 254 aa5.61□□□□□ -1.51
CKS1B-207ENST00000477676 PIH1D3Q9NQM4 214 aaKnown RBP5.61□□□□□ -1.51
CKS1B-207ENST00000477676 SIRT5Q9NXA8 310 aa5.61□□□□□ -1.51
CKS1B-207ENST00000477676 RAI14Q9P0K7 980 aa5.61□□□□□ -1.51
CKS1B-207ENST00000477676 BTBD7Q9P203 1132 aa5.61□□□□□ -1.51
CKS1B-207ENST00000477676 PI4KBQ9UBF8 816 aa5.61□□□□□ -1.51
CKS1B-207ENST00000477676 SAP30BPQ9UHR5 308 aaKnown RBP5.61□□□□□ -1.51
CKS1B-207ENST00000477676 HERC5Q9UII4 1024 aaKnown RBP5.61□□□□□ -1.51
CKS1B-207ENST00000477676 MYRFQ9Y2G1 1151 aa5.61□□□□□ -1.51
CKS1B-207ENST00000477676 GREB1LQ9C091 1923 aaPredicted RBP5.6□□□□□ -1.51
CKS1B-207ENST00000477676 MYH4Q9Y623 1939 aa5.6□□□□□ -1.51
CKS1B-207ENST00000477676 GH2P01242 217 aa5.6□□□□□ -1.51
CKS1B-207ENST00000477676 LDHCP07864 332 aa5.6□□□□□ -1.51
CKS1B-207ENST00000477676 ASNSP08243 561 aa5.6□□□□□ -1.51
CKS1B-207ENST00000477676 ZKSCAN1P17029 563 aaPredicted RBP5.6□□□□□ -1.51
CKS1B-207ENST00000477676 MAPK4P31152 587 aa5.6□□□□□ -1.51
CKS1B-207ENST00000477676 PABPC4Q13310 644 aaKnown RBP eCLIP5.6□□□□□ -1.513e-23■□□□□ 9
CKS1B-207ENST00000477676 KIAA1755Q5JYT7 1200 aa5.6□□□□□ -1.51
CKS1B-207ENST00000477676 TMEM201Q5SNT2 666 aa5.6□□□□□ -1.51
CKS1B-207ENST00000477676 FAM109BQ6ICB4 259 aaPredicted RBP5.6□□□□□ -1.51
CKS1B-207ENST00000477676 PLEKHH3Q7Z736 793 aa5.6□□□□□ -1.51
CKS1B-207ENST00000477676 SLFN12Q8IYM2 578 aa5.6□□□□□ -1.51
CKS1B-207ENST00000477676 PHACTR4Q8IZ21 702 aa5.6□□□□□ -1.51
CKS1B-207ENST00000477676 ENOX1Q8TC92 643 aaKnown RBP5.6□□□□□ -1.51
CKS1B-207ENST00000477676 SOCS4Q8WXH5 440 aa5.6□□□□□ -1.51
CKS1B-207ENST00000477676 C12orf42Q96LP6 360 aa5.6□□□□□ -1.51
CKS1B-207ENST00000477676 APBA2Q99767 749 aa5.6□□□□□ -1.51
CKS1B-207ENST00000477676 BDH2Q9BUT1 245 aa5.6□□□□□ -1.51
CKS1B-207ENST00000477676 TTYH1Q9H313 450 aaPredicted RBP5.6□□□□□ -1.51
CKS1B-207ENST00000477676 CNTD2Q9H8S5 307 aa5.6□□□□□ -1.51
CKS1B-207ENST00000477676 AS3MTQ9HBK9 375 aa5.6□□□□□ -1.51
CKS1B-207ENST00000477676 PRRC2BQ5JSZ5 2229 aaKnown RBP5.59□□□□□ -1.51
CKS1B-207ENST00000477676 LCTP09848 1927 aa5.59□□□□□ -1.51
CKS1B-207ENST00000477676 A0A1W2PRG0 241 aa5.59□□□□□ -1.51
CKS1B-207ENST00000477676 NOTOA8MTQ0 251 aa5.59□□□□□ -1.51
CKS1B-207ENST00000477676 C19orf81C9J6K1 198 aa5.59□□□□□ -1.51
CKS1B-207ENST00000477676 SMIM22K7EJ46 135 aa5.59□□□□□ -1.51
CKS1B-207ENST00000477676 N4BP3O15049 544 aa5.59□□□□□ -1.51
CKS1B-207ENST00000477676 AKAP8O43823 692 aaKnown RBP5.59□□□□□ -1.51
CKS1B-207ENST00000477676 HOXC6P09630 235 aa5.59□□□□□ -1.51
CKS1B-207ENST00000477676 CYBAP13498 195 aa5.59□□□□□ -1.51
CKS1B-207ENST00000477676 TRIM27P14373 513 aa5.59□□□□□ -1.51
CKS1B-207ENST00000477676 TFE3P19532 575 aaPredicted RBP5.59□□□□□ -1.51
CKS1B-207ENST00000477676 ITGB8P26012 769 aa5.59□□□□□ -1.51
CKS1B-207ENST00000477676 GBP1P32455 592 aa5.59□□□□□ -1.51
CKS1B-207ENST00000477676 CYP2C19P33261 490 aa5.59□□□□□ -1.51
CKS1B-207ENST00000477676 SHMT1P34896 483 aa5.59□□□□□ -1.51
CKS1B-207ENST00000477676 RGS2P41220 211 aa5.59□□□□□ -1.51
CKS1B-207ENST00000477676 PLCD1P51178 756 aa5.59□□□□□ -1.51
CKS1B-207ENST00000477676 EPHB4P54760 987 aa5.59□□□□□ -1.51
CKS1B-207ENST00000477676 RTP1P59025 263 aa5.59□□□□□ -1.51
CKS1B-207ENST00000477676 GSTO1P78417 241 aa5.59□□□□□ -1.51
CKS1B-207ENST00000477676 GRB14Q14449 540 aa5.59□□□□□ -1.51
CKS1B-207ENST00000477676 SHHQ15465 462 aa5.59□□□□□ -1.51
CKS1B-207ENST00000477676 ZYXQ15942 572 aaKnown RBP5.59□□□□□ -1.51
CKS1B-207ENST00000477676 GJC2Q5T442 439 aaPredicted RBP5.59□□□□□ -1.51
CKS1B-207ENST00000477676 ADGRF1Q5T601 910 aa5.59□□□□□ -1.51
CKS1B-207ENST00000477676 ANO1Q5XXA6 986 aa5.59□□□□□ -1.51
CKS1B-207ENST00000477676 NAA16Q6N069 864 aaPredicted RBP5.59□□□□□ -1.51
CKS1B-207ENST00000477676 TATDN1Q6P1N9 297 aa5.59□□□□□ -1.51
CKS1B-207ENST00000477676 CATSPERGQ6ZRH7 1159 aa5.59□□□□□ -1.51
CKS1B-207ENST00000477676 FRMD5Q7Z6J6 570 aa5.59□□□□□ -1.51
CKS1B-207ENST00000477676 FOXP4Q8IVH2 680 aaPredicted RBP5.59□□□□□ -1.51
CKS1B-207ENST00000477676 TMEFF1Q8IYR6 380 aa5.59□□□□□ -1.51
CKS1B-207ENST00000477676 EDC3Q96F86 508 aaKnown RBP5.59□□□□□ -1.51
CKS1B-207ENST00000477676 CDX2Q99626 313 aaPredicted RBP5.59□□□□□ -1.51
CKS1B-207ENST00000477676 GPR20Q99678 358 aa5.59□□□□□ -1.51
CKS1B-207ENST00000477676 API5Q9BZZ5 524 aaKnown RBP5.59□□□□□ -1.51
CKS1B-207ENST00000477676 SENP6Q9GZR1 1112 aaPredicted RBP5.59□□□□□ -1.51
CKS1B-207ENST00000477676 ANTXR1Q9H6X2 564 aa5.59□□□□□ -1.51
CKS1B-207ENST00000477676 LUC7LQ9NQ29 371 aaKnown RBP5.59□□□□□ -1.51
CKS1B-207ENST00000477676 TMOD4Q9NZQ9 345 aa5.59□□□□□ -1.51
CKS1B-207ENST00000477676 LRP2BPQ9P2M1 347 aa5.59□□□□□ -1.51
CKS1B-207ENST00000477676 DBNLQ9UJU6 430 aaKnown RBP5.59□□□□□ -1.51
CKS1B-207ENST00000477676 RABGAP1Q9Y3P9 1069 aa5.59□□□□□ -1.51
CKS1B-207ENST00000477676 TET1Q8NFU7 2136 aa5.59□□□□□ -1.52
CKS1B-207ENST00000477676 TRIM43BA6NCK2 446 aa5.58□□□□□ -1.52
CKS1B-207ENST00000477676 SLC15A5A6NIM6 579 aa5.58□□□□□ -1.52
CKS1B-207ENST00000477676 HRKO00198 91 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms