RNA–Protein interactions for RNA: ENST00000477583.1

CACUL1-202, Transcript of CDK2 associated cullin domain 1, humanhuman

TSL 1 (best)

Gene CACUL1, Length 432 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACUL1-202ENST00000477583 CDK11BP21127 795 aaKnown RBP3.58□□□□□ -1.84
CACUL1-202ENST00000477583 IBSPP21815 317 aaPredicted RBP3.58□□□□□ -1.84
CACUL1-202ENST00000477583 FNTBP49356 437 aa3.58□□□□□ -1.84
CACUL1-202ENST00000477583 STAT5BP51692 787 aa3.58□□□□□ -1.84
CACUL1-202ENST00000477583 EVA1CP58658 441 aa3.58□□□□□ -1.84
CACUL1-202ENST00000477583 SMAD3P84022 425 aaKnown RBP3.58□□□□□ -1.84
CACUL1-202ENST00000477583 TMPRSS15P98073 1019 aa3.58□□□□□ -1.84
CACUL1-202ENST00000477583 HGFACQ04756 655 aa3.58□□□□□ -1.84
CACUL1-202ENST00000477583 MOGSQ13724 837 aa3.58□□□□□ -1.84
CACUL1-202ENST00000477583 GRAMD4Q6IC98 578 aa3.58□□□□□ -1.84
CACUL1-202ENST00000477583 LRSAM1Q6UWE0 723 aa3.58□□□□□ -1.84
CACUL1-202ENST00000477583 TMPRSS6Q8IU80 811 aa3.58□□□□□ -1.84
CACUL1-202ENST00000477583 PASD1Q8IV76 773 aa3.58□□□□□ -1.84
CACUL1-202ENST00000477583 PRPF38AQ8NAV1 312 aaKnown RBP3.58□□□□□ -1.84
CACUL1-202ENST00000477583 HIPK4Q8NE63 616 aa3.58□□□□□ -1.84
CACUL1-202ENST00000477583 WDR66Q8TBY9 1149 aa3.58□□□□□ -1.84
CACUL1-202ENST00000477583 ERCC4Q92889 916 aaPredicted RBP3.58□□□□□ -1.84
CACUL1-202ENST00000477583 FOXRED1Q96CU9 486 aaPredicted RBP3.58□□□□□ -1.84
CACUL1-202ENST00000477583 C16orf92Q96LL3 132 aa3.58□□□□□ -1.84
CACUL1-202ENST00000477583 PRRX2Q99811 253 aa3.58□□□□□ -1.84
CACUL1-202ENST00000477583 AMNQ9BXJ7 453 aa3.58□□□□□ -1.84
CACUL1-202ENST00000477583 BRINP2Q9C0B6 783 aa3.58□□□□□ -1.84
CACUL1-202ENST00000477583 MS4A5Q9H3V2 200 aa3.58□□□□□ -1.84
CACUL1-202ENST00000477583 ZMAT4Q9H898 229 aa3.58□□□□□ -1.84
CACUL1-202ENST00000477583 SLC2A4RGQ9NR83 387 aa3.58□□□□□ -1.84
CACUL1-202ENST00000477583 UCKL1Q9NWZ5 548 aa3.58□□□□□ -1.84
CACUL1-202ENST00000477583 MCM8Q9UJA3 840 aa3.58□□□□□ -1.84
CACUL1-202ENST00000477583 APOBEC2Q9Y235 224 aaKnown RBP3.58□□□□□ -1.84
CACUL1-202ENST00000477583 NOP58Q9Y2X3 529 aaKnown RBP3.58□□□□□ -1.84
CACUL1-202ENST00000477583 hCG_2014768A0A024R1R8 64 aa3.57□□□□□ -1.84
CACUL1-202ENST00000477583 LCHNA4D1U4 455 aa3.57□□□□□ -1.84
CACUL1-202ENST00000477583 PMS2P1A4D2B8 440 aa3.57□□□□□ -1.84
CACUL1-202ENST00000477583 RIN1Q13671 783 aa3.57□□□□□ -1.84
CACUL1-202ENST00000477583 RRP1BQ14684 758 aaKnown RBP3.57□□□□□ -1.84
CACUL1-202ENST00000477583 EPHA7Q15375 998 aa3.57□□□□□ -1.84
CACUL1-202ENST00000477583 TERF2Q15554 542 aa3.57□□□□□ -1.84
CACUL1-202ENST00000477583 DDB1Q16531 1140 aa3.57□□□□□ -1.84
CACUL1-202ENST00000477583 BROXQ5VW32 411 aa3.57□□□□□ -1.84
CACUL1-202ENST00000477583 PCSK4Q6UW60 755 aa3.57□□□□□ -1.84
CACUL1-202ENST00000477583 RTN4RL1Q86UN2 441 aaPredicted RBP3.57□□□□□ -1.84
CACUL1-202ENST00000477583 RTF1Q92541 710 aaKnown RBP3.57□□□□□ -1.84
CACUL1-202ENST00000477583 SLC5A5Q92911 643 aa3.57□□□□□ -1.84
CACUL1-202ENST00000477583 TTPALQ9BTX7 342 aa3.57□□□□□ -1.84
CACUL1-202ENST00000477583 HECAQ9UBI9 543 aaPredicted RBP3.57□□□□□ -1.84
CACUL1-202ENST00000477583 ASB1Q9Y576 335 aa3.57□□□□□ -1.84
CACUL1-202ENST00000477583 PHLDB1Q86UU1 1377 aa3.56□□□□□ -1.84
CACUL1-202ENST00000477583 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP3.56□□□□□ -1.84
CACUL1-202ENST00000477583 A0A1W2PRX2 142 aa3.56□□□□□ -1.84
CACUL1-202ENST00000477583 UBA6A0AVT1 1052 aaPredicted RBP3.56□□□□□ -1.84
CACUL1-202ENST00000477583 PEX11BO96011 259 aa3.56□□□□□ -1.84
CACUL1-202ENST00000477583 CD40P25942 277 aa3.56□□□□□ -1.84
CACUL1-202ENST00000477583 LSP1P33241 339 aa3.56□□□□□ -1.84
CACUL1-202ENST00000477583 IGBP1P78318 339 aa3.56□□□□□ -1.84
CACUL1-202ENST00000477583 PHC1P78364 1004 aa3.56□□□□□ -1.84
CACUL1-202ENST00000477583 FAM50AQ14320 339 aaKnown RBP3.56□□□□□ -1.84
CACUL1-202ENST00000477583 LRRC32Q14392 662 aa3.56□□□□□ -1.84
CACUL1-202ENST00000477583 GPR158Q5T848 1215 aa3.56□□□□□ -1.84
CACUL1-202ENST00000477583 RNF219Q5W0B1 726 aaPredicted RBP3.56□□□□□ -1.84
CACUL1-202ENST00000477583 SPTY2D1Q68D10 685 aaPredicted RBP3.56□□□□□ -1.84
CACUL1-202ENST00000477583 DPY19L2P1Q6NXN4 242 aa3.56□□□□□ -1.84
CACUL1-202ENST00000477583 HDGFL2Q7Z4V5 671 aaPredicted RBP3.56□□□□□ -1.84
CACUL1-202ENST00000477583 SPATS2Q86XZ4 545 aaKnown RBP3.56□□□□□ -1.84
CACUL1-202ENST00000477583 ULK2Q8IYT8 1036 aa3.56□□□□□ -1.84
CACUL1-202ENST00000477583 RPUSD2Q8IZ73 545 aaKnown RBP3.56□□□□□ -1.84
CACUL1-202ENST00000477583 ANKRD35Q8N283 1001 aa3.56□□□□□ -1.84
CACUL1-202ENST00000477583 CLRN3Q8NCR9 226 aa3.56□□□□□ -1.84
CACUL1-202ENST00000477583 COG1Q8WTW3 980 aa3.56□□□□□ -1.84
CACUL1-202ENST00000477583 RABGGTAQ92696 567 aa3.56□□□□□ -1.84
CACUL1-202ENST00000477583 MPHOSPH9Q99550 1183 aa3.56□□□□□ -1.84
CACUL1-202ENST00000477583 AGO3Q9H9G7 860 aaKnown RBP3.56□□□□□ -1.84
CACUL1-202ENST00000477583 TMEM191CA6NGB0 347 aa3.55□□□□□ -1.84
CACUL1-202ENST00000477583 ULK1O75385 1050 aa3.55□□□□□ -1.84
CACUL1-202ENST00000477583 PRKD3O94806 890 aa3.55□□□□□ -1.84
CACUL1-202ENST00000477583 PRLP01236 227 aa3.55□□□□□ -1.84
CACUL1-202ENST00000477583 RGS3P49796 1198 aa3.55□□□□□ -1.84
CACUL1-202ENST00000477583 SESN3P58005 492 aa3.55□□□□□ -1.84
CACUL1-202ENST00000477583 ANAPC15P60006 121 aa3.55□□□□□ -1.84
CACUL1-202ENST00000477583 SLC6A3Q01959 620 aa3.55□□□□□ -1.84
CACUL1-202ENST00000477583 ALDH6A1Q02252 535 aaKnown RBP3.55□□□□□ -1.84
CACUL1-202ENST00000477583 ADCY1Q08828 1119 aa3.55□□□□□ -1.84
CACUL1-202ENST00000477583 FSTL1Q12841 308 aa3.55□□□□□ -1.84
CACUL1-202ENST00000477583 MAP3K12Q12852 859 aa3.55□□□□□ -1.84
CACUL1-202ENST00000477583 IQSEC1Q6DN90 963 aa3.55□□□□□ -1.84
CACUL1-202ENST00000477583 NME9Q86XW9 330 aa3.55□□□□□ -1.84
CACUL1-202ENST00000477583 ZZZ3Q8IYH5 903 aa3.55□□□□□ -1.84
CACUL1-202ENST00000477583 C7orf31Q8N865 590 aa3.55□□□□□ -1.84
CACUL1-202ENST00000477583 ZNF610Q8N9Z0 462 aa3.55□□□□□ -1.84
CACUL1-202ENST00000477583 ZNF496Q96IT1 587 aaPredicted RBP3.55□□□□□ -1.84
CACUL1-202ENST00000477583 TUBGCP5Q96RT8 1024 aa3.55□□□□□ -1.84
CACUL1-202ENST00000477583 FOXB1Q99853 325 aa3.55□□□□□ -1.84
CACUL1-202ENST00000477583 VTA1Q9NP79 307 aa3.55□□□□□ -1.84
CACUL1-202ENST00000477583 SLC5A4Q9NY91 659 aa3.55□□□□□ -1.84
CACUL1-202ENST00000477583 SH3BP1Q9Y3L3 701 aa3.55□□□□□ -1.84
CACUL1-202ENST00000477583 FOXN1O15353 648 aa3.54□□□□□ -1.84
CACUL1-202ENST00000477583 RAB11FIP3O75154 756 aa3.54□□□□□ -1.84
CACUL1-202ENST00000477583 KATNA1O75449 491 aa3.54□□□□□ -1.84
CACUL1-202ENST00000477583 RPS6KA4O75676 772 aa3.54□□□□□ -1.84
CACUL1-202ENST00000477583 APOL3O95236 402 aa3.54□□□□□ -1.84
CACUL1-202ENST00000477583 KRT4P19013 534 aa3.54□□□□□ -1.84
CACUL1-202ENST00000477583 APEX1P27695 318 aaKnown RBP3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms