RNA–Protein interactions for RNA: ENST00000477299.5

COPS3-207, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-207ENST00000477299 SFR1Q86XK3 245 aa17.54■□□□□ 0.4
COPS3-207ENST00000477299 IFNLR1Q8IU57 520 aaPredicted RBP17.54■□□□□ 0.4
COPS3-207ENST00000477299 CEP57L1Q8IYX8 460 aa17.54■□□□□ 0.4
COPS3-207ENST00000477299 RPUSD2Q8IZ73 545 aaKnown RBP17.54■□□□□ 0.4
COPS3-207ENST00000477299 CNNM3Q8NE01 707 aa17.54■□□□□ 0.4
COPS3-207ENST00000477299 GLIS3Q8NEA6 775 aa17.54■□□□□ 0.4
COPS3-207ENST00000477299 DRC1Q96MC2 740 aa17.54■□□□□ 0.4
COPS3-207ENST00000477299 ODF2LQ9ULJ1 636 aa17.54■□□□□ 0.4
COPS3-207ENST00000477299 TTC3P53804 2025 aa17.54■□□□□ 0.4
COPS3-207ENST00000477299 INO80B-WBP1J3KQ70 363 aa17.53■□□□□ 0.4
COPS3-207ENST00000477299 KLRC4O43908 158 aa17.53■□□□□ 0.4
COPS3-207ENST00000477299 NAMPTP43490 491 aa17.53■□□□□ 0.4
COPS3-207ENST00000477299 PHKA2P46019 1235 aa17.53■□□□□ 0.4
COPS3-207ENST00000477299 UBE2HP62256 183 aa17.53■□□□□ 0.4
COPS3-207ENST00000477299 ASIC1P78348 528 aa17.53■□□□□ 0.4
COPS3-207ENST00000477299 CDC42EP1Q00587 391 aa17.53■□□□□ 0.4
COPS3-207ENST00000477299 POU5F1BQ06416 359 aa17.53■□□□□ 0.4
COPS3-207ENST00000477299 TFDP1Q14186 410 aa17.53■□□□□ 0.4
COPS3-207ENST00000477299 DSC3Q14574 896 aa17.53■□□□□ 0.4
COPS3-207ENST00000477299 ZC2HC1CQ53FD0 456 aaPredicted RBP17.53■□□□□ 0.4
COPS3-207ENST00000477299 ODR4Q5SWX8 454 aa17.53■□□□□ 0.4
COPS3-207ENST00000477299 CDCA2Q69YH5 1023 aaPredicted RBP17.53■□□□□ 0.4
COPS3-207ENST00000477299 CNKSR3Q6P9H4 555 aa17.53■□□□□ 0.4
COPS3-207ENST00000477299 SRGAP1Q7Z6B7 1085 aa17.53■□□□□ 0.4
COPS3-207ENST00000477299 SEPT8Q92599 483 aa17.53■□□□□ 0.4
COPS3-207ENST00000477299 CPB2Q96IY4 423 aa17.53■□□□□ 0.4
COPS3-207ENST00000477299 IFT74Q96LB3 600 aa17.53■□□□□ 0.4
COPS3-207ENST00000477299 GBP4Q96PP9 640 aa17.53■□□□□ 0.4
COPS3-207ENST00000477299 TIPINQ9BVW5 301 aa17.53■□□□□ 0.4
COPS3-207ENST00000477299 INO80BQ9C086 356 aaPredicted RBP17.53■□□□□ 0.4
COPS3-207ENST00000477299 CCDC113Q9H0I3 377 aa17.53■□□□□ 0.4
COPS3-207ENST00000477299 IKZF4Q9H2S9 585 aa17.53■□□□□ 0.4
COPS3-207ENST00000477299 KMT5AQ9NQR1 393 aa17.53■□□□□ 0.4
COPS3-207ENST00000477299 PANK4Q9NVE7 773 aa17.53■□□□□ 0.4
COPS3-207ENST00000477299 COLQQ9Y215 455 aaPredicted RBP17.53■□□□□ 0.4
COPS3-207ENST00000477299 SQORQ9Y6N5 450 aa17.53■□□□□ 0.4
COPS3-207ENST00000477299 TRIP11Q15643 1979 aa17.52■□□□□ 0.4
COPS3-207ENST00000477299 FRMD3A2A2Y4 597 aa17.52■□□□□ 0.4
COPS3-207ENST00000477299 ENPP3O14638 875 aa17.52■□□□□ 0.4
COPS3-207ENST00000477299 TBCAO75347 108 aaKnown RBP17.52■□□□□ 0.4
COPS3-207ENST00000477299 PARNO95453 639 aaKnown RBP17.52■□□□□ 0.4
COPS3-207ENST00000477299 IBSPP21815 317 aaPredicted RBP17.52■□□□□ 0.4
COPS3-207ENST00000477299 HOXA11P31270 313 aaPredicted RBP17.52■□□□□ 0.4
COPS3-207ENST00000477299 DEFB103AP81534 67 aa17.52■□□□□ 0.4
COPS3-207ENST00000477299 PNOCQ13519 176 aa17.52■□□□□ 0.4
COPS3-207ENST00000477299 FAM109BQ6ICB4 259 aaPredicted RBP17.52■□□□□ 0.4
COPS3-207ENST00000477299 CATSPER4Q7RTX7 472 aa17.52■□□□□ 0.4
COPS3-207ENST00000477299 TMEM161BQ8NDZ6 487 aa17.52■□□□□ 0.4
COPS3-207ENST00000477299 DEPTORQ8TB45 409 aa17.52■□□□□ 0.4
COPS3-207ENST00000477299 NTPCRQ9BSD7 190 aaKnown RBP17.52■□□□□ 0.4
COPS3-207ENST00000477299 PARVGQ9HBI0 331 aa17.52■□□□□ 0.4
COPS3-207ENST00000477299 DACT1Q9NYF0 836 aa17.52■□□□□ 0.4
COPS3-207ENST00000477299 GRXCR1A8MXD5 290 aa17.51■□□□□ 0.39
COPS3-207ENST00000477299 GTPBP6O43824 516 aaPredicted RBP17.51■□□□□ 0.39
COPS3-207ENST00000477299 TRAK2O60296 914 aa17.51■□□□□ 0.39
COPS3-207ENST00000477299 TSPAN1O60635 241 aa17.51■□□□□ 0.39
COPS3-207ENST00000477299 CASP5P51878 434 aa17.51■□□□□ 0.39
COPS3-207ENST00000477299 NCKAP1LP55160 1127 aa17.51■□□□□ 0.39
COPS3-207ENST00000477299 COASYQ13057 564 aa17.51■□□□□ 0.39
COPS3-207ENST00000477299 DMP1Q13316 513 aaPredicted RBP17.51■□□□□ 0.39
COPS3-207ENST00000477299 PPP2R5AQ15172 486 aa17.51■□□□□ 0.39
COPS3-207ENST00000477299 HERC4Q5GLZ8 1057 aaPredicted RBP17.51■□□□□ 0.39
COPS3-207ENST00000477299 NT5DC1Q5TFE4 455 aa17.51■□□□□ 0.39
COPS3-207ENST00000477299 PRPF38BQ5VTL8 546 aaKnown RBP17.51■□□□□ 0.39
COPS3-207ENST00000477299 HAUS6Q7Z4H7 955 aa17.51■□□□□ 0.39
COPS3-207ENST00000477299 USP38Q8NB14 1042 aa17.51■□□□□ 0.39
COPS3-207ENST00000477299 GPT2Q8TD30 523 aa17.51■□□□□ 0.39
COPS3-207ENST00000477299 SPIRE2Q8WWL2 714 aa17.51■□□□□ 0.39
COPS3-207ENST00000477299 HERVK_113Q902F9 699 aa17.51■□□□□ 0.39
COPS3-207ENST00000477299 ADAM2Q99965 735 aa17.51■□□□□ 0.39
COPS3-207ENST00000477299 PYM1Q9BRP8 204 aaKnown RBP17.51■□□□□ 0.39
COPS3-207ENST00000477299 FZD8Q9H461 694 aa17.51■□□□□ 0.39
COPS3-207ENST00000477299 MAGEF1Q9HAY2 307 aa17.51■□□□□ 0.39
COPS3-207ENST00000477299 ARHGAP28Q9P2N2 729 aa17.51■□□□□ 0.39
COPS3-207ENST00000477299 USP25Q9UHP3 1055 aa17.51■□□□□ 0.39
COPS3-207ENST00000477299 ZBBXA8MT70 800 aa17.5■□□□□ 0.39
COPS3-207ENST00000477299 GPR182O15218 404 aa17.5■□□□□ 0.39
COPS3-207ENST00000477299 MAPTP10636 758 aaKnown RBP17.5■□□□□ 0.39
COPS3-207ENST00000477299 ARF4P18085 180 aaPredicted RBP17.5■□□□□ 0.39
COPS3-207ENST00000477299 BMP8BP34820 402 aa17.5■□□□□ 0.39
COPS3-207ENST00000477299 WDR5P61964 334 aaKnown RBP17.5■□□□□ 0.39
COPS3-207ENST00000477299 AMPD3Q01432 767 aa17.5■□□□□ 0.39
COPS3-207ENST00000477299 KCNA1Q09470 495 aa17.5■□□□□ 0.39
COPS3-207ENST00000477299 DPYDQ12882 1025 aa17.5■□□□□ 0.39
COPS3-207ENST00000477299 IKBKEQ14164 716 aa17.5■□□□□ 0.39
COPS3-207ENST00000477299 RASIP1Q5U651 963 aa17.5■□□□□ 0.39
COPS3-207ENST00000477299 CNNM4Q6P4Q7 775 aa17.5■□□□□ 0.39
COPS3-207ENST00000477299 PSRC1Q6PGN9 363 aaPredicted RBP17.5■□□□□ 0.39
COPS3-207ENST00000477299 ZNF710Q8N1W2 664 aa17.5■□□□□ 0.39
COPS3-207ENST00000477299 NFKBIZQ9BYH8 718 aa17.5■□□□□ 0.39
COPS3-207ENST00000477299 LARSQ9P2J5 1176 aaKnown RBP17.5■□□□□ 0.39
COPS3-207ENST00000477299 DENND3A2RUS2 1198 aa17.49■□□□□ 0.39
COPS3-207ENST00000477299 K7ENM7 598 aa17.49■□□□□ 0.39
COPS3-207ENST00000477299 K7ERI5 159 aa17.49■□□□□ 0.39
COPS3-207ENST00000477299 PRKCBP05771 671 aa17.49■□□□□ 0.39
COPS3-207ENST00000477299 PFKMP08237 780 aa17.49■□□□□ 0.39
COPS3-207ENST00000477299 MYBP10242 640 aa17.49■□□□□ 0.39
COPS3-207ENST00000477299 SFPQP23246 707 aaKnown RBP eCLIP17.49■□□□□ 0.39
COPS3-207ENST00000477299 EHHADHQ08426 723 aa17.49■□□□□ 0.39
COPS3-207ENST00000477299 KMT5BQ4FZB7 885 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 111.7 ms